RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 BRF1Q92994 677 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 FPGT-TNNI3KV9GXZ4 949 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 SIPA1L3O60292 1781 aaPredicted RBP10.23□□□□□ -0.77
PKP4-210ENST00000480171 PTGS1P23219 599 aa10.23□□□□□ -0.77
PKP4-210ENST00000480171 MCMDC2Q4G0Z9 681 aa10.23□□□□□ -0.77
PKP4-210ENST00000480171 Q6ZUG5 572 aa10.23□□□□□ -0.77
PKP4-210ENST00000480171 COPS6Q7L5N1 327 aa10.23□□□□□ -0.77
PKP4-210ENST00000480171 CHMP4CQ96CF2 233 aa10.23□□□□□ -0.77
PKP4-210ENST00000480171 LLPHQ9BRT6 129 aaKnown RBP10.23□□□□□ -0.77
PKP4-210ENST00000480171 RNF216Q9NWF9 866 aaPredicted RBP10.23□□□□□ -0.77
PKP4-210ENST00000480171 ZNF165P49910 485 aa10.23□□□□□ -0.77
PKP4-210ENST00000480171 ZNF75DP51815 510 aa10.23□□□□□ -0.77
PKP4-210ENST00000480171 RESTQ13127 1097 aa10.23□□□□□ -0.77
PKP4-210ENST00000480171 ANKRD13DQ6ZTN6 518 aa10.23□□□□□ -0.77
PKP4-210ENST00000480171 RBM33Q96EV2 1170 aaKnown RBP10.23□□□□□ -0.77
PKP4-210ENST00000480171 TAF6LQ9Y6J9 622 aa10.23□□□□□ -0.77
PKP4-210ENST00000480171 GOLGA6L19H0YKK7 550 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 CTAGE5O15320 804 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 TFCP2Q12800 502 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 CCDC186Q7Z3E2 898 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 BBXQ8WY36 941 aaPredicted RBP10.22□□□□□ -0.77
PKP4-210ENST00000480171 DNAJC2Q99543 621 aaKnown RBP10.22□□□□□ -0.77
PKP4-210ENST00000480171 SLC52A2Q9HAB3 445 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 DBNLQ9UJU6 430 aaKnown RBP10.22□□□□□ -0.77
PKP4-210ENST00000480171 CAMTA1Q9Y6Y1 1673 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 JAK2O60674 1132 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 NR1I2O75469 434 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 EPHA10Q5JZY3 1008 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 PLA2G4DQ86XP0 818 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 EDC3Q96F86 508 aaKnown RBP10.22□□□□□ -0.77
PKP4-210ENST00000480171 ADAMTS7Q9UKP4 1686 aa10.22□□□□□ -0.77
PKP4-210ENST00000480171 RIOK3O14730 519 aaKnown RBP10.21□□□□□ -0.77
PKP4-210ENST00000480171 TATP17735 454 aaPredicted RBP10.21□□□□□ -0.77
PKP4-210ENST00000480171 PTPN12Q05209 780 aaKnown RBP10.21□□□□□ -0.77
PKP4-210ENST00000480171 SLC39A6Q13433 755 aa10.21□□□□□ -0.77
PKP4-210ENST00000480171 COL9A3Q14050 684 aaPredicted RBP10.21□□□□□ -0.77
PKP4-210ENST00000480171 TTC5Q8N0Z6 440 aa10.21□□□□□ -0.77
PKP4-210ENST00000480171 PGBD1Q96JS3 809 aa10.21□□□□□ -0.77
PKP4-210ENST00000480171 HAUS7Q99871 368 aa10.21□□□□□ -0.77
PKP4-210ENST00000480171 BCL2L12Q9HB09 334 aa10.21□□□□□ -0.77
PKP4-210ENST00000480171 SNRPA1P09661 255 aaKnown RBP10.21□□□□□ -0.78
PKP4-210ENST00000480171 RFX5P48382 616 aaPredicted RBP10.21□□□□□ -0.78
PKP4-210ENST00000480171 ATL3Q6DD88 541 aa10.21□□□□□ -0.78
PKP4-210ENST00000480171 NAA16Q6N069 864 aaPredicted RBP10.21□□□□□ -0.78
PKP4-210ENST00000480171 ZNF710Q8N1W2 664 aa10.21□□□□□ -0.78
PKP4-210ENST00000480171 COL15A1P39059 1388 aa10.21□□□□□ -0.78
PKP4-210ENST00000480171 PFKFB2O60825 505 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 CDC25BP30305 580 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 TSC1Q92574 1164 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 DDX11Q96FC9 970 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 ZNF396Q96N95 335 aaPredicted RBP10.2□□□□□ -0.78
PKP4-210ENST00000480171 DNAJC25Q9H1X3 360 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 CLIP2Q9UDT6 1046 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 CYP21A2P08686 494 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 RABL6Q3YEC7 729 aaPredicted RBP10.2□□□□□ -0.78
PKP4-210ENST00000480171 CCDC73Q6ZRK6 1079 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 DHX32Q7L7V1 743 aaKnown RBP10.2□□□□□ -0.78
PKP4-210ENST00000480171 UBE3BQ7Z3V4 1068 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 PDCL2Q8N4E4 241 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 SMARCC2Q8TAQ2 1214 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 ORAI2Q96SN7 254 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 DBNDD2Q9BQY9 259 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 AXIN2Q9Y2T1 843 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 ZNF609O15014 1411 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 NEMFO60524 1076 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 STX1AQ16623 288 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 ZSCAN25Q6NSZ9 544 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 CCDC129Q6ZRS4 1044 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 KBTBD3Q8NAB2 608 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 NFATC2IPQ8NCF5 419 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 IPO4Q8TEX9 1081 aaKnown RBP10.2□□□□□ -0.78
PKP4-210ENST00000480171 HELLSQ9NRZ9 838 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 SH3TC1Q8TE82 1336 aa10.2□□□□□ -0.78
PKP4-210ENST00000480171 ERBB3P21860 1342 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 A0A087WZG4 1122 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 PHKG2P15735 406 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 SCRN1Q12765 414 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 DDX46Q7L014 1031 aaKnown RBP10.19□□□□□ -0.78
PKP4-210ENST00000480171 KRT28Q7Z3Y7 464 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 IFNL2Q8IZJ0 200 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 FMNL2Q96PY5 1086 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 NLRP2Q9NX02 1062 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.19□□□□□ -0.781e-8■□□□□ 9.3
PKP4-210ENST00000480171 RCOR1Q9UKL0 485 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 SMTNL1A8MU46 457 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 KINO60870 393 aaKnown RBP10.19□□□□□ -0.78
PKP4-210ENST00000480171 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 CCAR1Q8IX12 1150 aaKnown RBP10.19□□□□□ -0.78
PKP4-210ENST00000480171 JARID2Q92833 1246 aaPredicted RBP10.19□□□□□ -0.78
PKP4-210ENST00000480171 ZNF496Q96IT1 587 aaPredicted RBP10.19□□□□□ -0.78
PKP4-210ENST00000480171 DSCC1Q9BVC3 393 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 PAXBP1Q9Y5B6 917 aa10.19□□□□□ -0.78
PKP4-210ENST00000480171 C5P01031 1676 aa10.18□□□□□ -0.78
PKP4-210ENST00000480171 BECN2A8MW95 431 aa10.18□□□□□ -0.78
PKP4-210ENST00000480171 CTIFO43310 598 aaKnown RBP10.18□□□□□ -0.78
PKP4-210ENST00000480171 SARM1Q6SZW1 724 aa10.18□□□□□ -0.78
PKP4-210ENST00000480171 NSUN7Q8NE18 718 aaKnown RBP10.18□□□□□ -0.78
PKP4-210ENST00000480171 SCN11AQ9UI33 1791 aa10.18□□□□□ -0.78
PKP4-210ENST00000480171 PALLDQ8WX93 1383 aa10.18□□□□□ -0.78
PKP4-210ENST00000480171 PTPDC1A2A3K4 754 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms