RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 KDM3BQ7LBC6 1761 aa15.83■□□□□ 0.12
C9orf78-205ENST00000480023 CEMIPQ8WUJ3 1361 aa15.83■□□□□ 0.12
C9orf78-205ENST00000480023 ROBO2Q9HCK4 1378 aa15.83■□□□□ 0.12
C9orf78-205ENST00000480023 ARMCX5Q6P1M9 558 aa15.83■□□□□ 0.12
C9orf78-205ENST00000480023 CCP110O43303 1012 aa15.82■□□□□ 0.12
C9orf78-205ENST00000480023 ETF1P62495 437 aaKnown RBP15.82■□□□□ 0.12
C9orf78-205ENST00000480023 TMCO3Q6UWJ1 677 aa15.82■□□□□ 0.12
C9orf78-205ENST00000480023 TXLNBQ8N3L3 684 aa15.82■□□□□ 0.12
C9orf78-205ENST00000480023 HDAC5Q9UQL6 1122 aa15.82■□□□□ 0.12
C9orf78-205ENST00000480023 NRDCO43847 1150 aa15.82■□□□□ 0.12
C9orf78-205ENST00000480023 ALDH1L1O75891 902 aa15.82■□□□□ 0.12
C9orf78-205ENST00000480023 SFPQP23246 707 aaKnown RBP eCLIP15.82■□□□□ 0.12
C9orf78-205ENST00000480023 DDX11Q96FC9 970 aa15.82■□□□□ 0.12
C9orf78-205ENST00000480023 FEZ2Q9UHY8 353 aaPredicted RBP15.82■□□□□ 0.12
C9orf78-205ENST00000480023 NUTM2FA1L443 756 aa15.81■□□□□ 0.12
C9orf78-205ENST00000480023 NPHP1O15259 732 aa15.81■□□□□ 0.12
C9orf78-205ENST00000480023 TAF5LO75529 589 aa15.81■□□□□ 0.12
C9orf78-205ENST00000480023 TPM1P09493 284 aa15.81■□□□□ 0.12
C9orf78-205ENST00000480023 RAD51AP2Q09MP3 1159 aa15.81■□□□□ 0.12
C9orf78-205ENST00000480023 NCAPD2Q15021 1401 aa15.81■□□□□ 0.12
C9orf78-205ENST00000480023 NUTM2GQ5VZR2 741 aa15.81■□□□□ 0.12
C9orf78-205ENST00000480023 MRC1P22897 1456 aa15.81■□□□□ 0.12
C9orf78-205ENST00000480023 UBXN4Q92575 508 aa15.8■□□□□ 0.12
C9orf78-205ENST00000480023 EAF2Q96CJ1 260 aaPredicted RBP15.8■□□□□ 0.12
C9orf78-205ENST00000480023 NEK1Q96PY6 1258 aa15.8■□□□□ 0.12
C9orf78-205ENST00000480023 CHPF2Q9P2E5 772 aa15.8■□□□□ 0.12
C9orf78-205ENST00000480023 TADA3O75528 432 aa15.8■□□□□ 0.12
C9orf78-205ENST00000480023 AMPHP49418 695 aa15.8■□□□□ 0.12
C9orf78-205ENST00000480023 EIF4A1P60842 406 aaKnown RBP15.8■□□□□ 0.12
C9orf78-205ENST00000480023 ZNF589Q86UQ0 364 aaPredicted RBP15.8■□□□□ 0.12
C9orf78-205ENST00000480023 FMR1NBQ8N0W7 255 aaPredicted RBP15.8■□□□□ 0.12
C9orf78-205ENST00000480023 ZNF396Q96N95 335 aaPredicted RBP15.8■□□□□ 0.12
C9orf78-205ENST00000480023 USP28Q96RU2 1077 aa15.8■□□□□ 0.12
C9orf78-205ENST00000480023 FSD1Q9BTV5 496 aa15.8■□□□□ 0.12
C9orf78-205ENST00000480023 XPO4Q9C0E2 1151 aaKnown RBP15.8■□□□□ 0.12
C9orf78-205ENST00000480023 EFCAB8A8MWE9 144 aa15.79■□□□□ 0.12
C9orf78-205ENST00000480023 SOX12O15370 315 aa15.79■□□□□ 0.12
C9orf78-205ENST00000480023 SASH1O94885 1247 aa15.79■□□□□ 0.12
C9orf78-205ENST00000480023 CCDC158Q5M9N0 1113 aa15.79■□□□□ 0.12
C9orf78-205ENST00000480023 PA2G4Q9UQ80 394 aaKnown RBP15.79■□□□□ 0.12
C9orf78-205ENST00000480023 RFX7Q2KHR2 1363 aa15.79■□□□□ 0.12
C9orf78-205ENST00000480023 SLIT1O75093 1534 aa15.79■□□□□ 0.12
C9orf78-205ENST00000480023 PFKFB2O60825 505 aa15.79■□□□□ 0.12
C9orf78-205ENST00000480023 SCRN1Q12765 414 aa15.79■□□□□ 0.12
C9orf78-205ENST00000480023 Q6ZUG5 572 aa15.79■□□□□ 0.12
C9orf78-205ENST00000480023 FSIP1Q8NA03 581 aa15.79■□□□□ 0.12
C9orf78-205ENST00000480023 PIK3C2AO00443 1686 aa15.78■□□□□ 0.12
C9orf78-205ENST00000480023 TSPOAP1O95153 1857 aa15.78■□□□□ 0.12
C9orf78-205ENST00000480023 A0A1W2PQ27 194 aa15.78■□□□□ 0.12
C9orf78-205ENST00000480023 A0A1W2PQ64 194 aa15.78■□□□□ 0.12
C9orf78-205ENST00000480023 A0A1W2PQD8 194 aa15.78■□□□□ 0.12
C9orf78-205ENST00000480023 CEBPZQ03701 1054 aaKnown RBP15.78■□□□□ 0.12
C9orf78-205ENST00000480023 TRIM65Q6PJ69 517 aa15.78■□□□□ 0.12
C9orf78-205ENST00000480023 TMC6Q7Z403 805 aa15.78■□□□□ 0.12
C9orf78-205ENST00000480023 NSUN7Q8NE18 718 aaKnown RBP15.78■□□□□ 0.12
C9orf78-205ENST00000480023 DNAI1Q9UI46 699 aa15.78■□□□□ 0.12
C9orf78-205ENST00000480023 A0A087WWV3 80 aa15.77■□□□□ 0.12
C9orf78-205ENST00000480023 MRPS27Q92552 414 aaKnown RBP15.77■□□□□ 0.12
C9orf78-205ENST00000480023 FTOQ9C0B1 505 aaKnown RBP eCLIP15.77■□□□□ 0.12
C9orf78-205ENST00000480023 IFNKQ9P0W0 207 aa15.77■□□□□ 0.12
C9orf78-205ENST00000480023 NEDD4P46934 1319 aa15.77■□□□□ 0.12
C9orf78-205ENST00000480023 EIF2S2P20042 333 aaKnown RBP15.77■□□□□ 0.11
C9orf78-205ENST00000480023 PSME1Q06323 249 aa15.77■□□□□ 0.11
C9orf78-205ENST00000480023 LRRFIP1Q32MZ4 808 aaKnown RBP15.77■□□□□ 0.11
C9orf78-205ENST00000480023 KIAA1468Q9P260 1216 aa15.77■□□□□ 0.11
C9orf78-205ENST00000480023 UTYO14607 1347 aa15.77■□□□□ 0.11
C9orf78-205ENST00000480023 SALL1Q9NSC2 1324 aa15.77■□□□□ 0.11
C9orf78-205ENST00000480023 COL15A1P39059 1388 aa15.77■□□□□ 0.11
C9orf78-205ENST00000480023 TBC1D8O95759 1140 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 DPCR1Q3MIW9 517 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 ADALQ6DHV7 355 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 FCHSD1Q86WN1 690 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.76■□□□□ 0.11
C9orf78-205ENST00000480023 U3KPZ7 1027 aaPredicted RBP15.76■□□□□ 0.11
C9orf78-205ENST00000480023 USP54Q70EL1 1684 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 SMC2O95347 1197 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 CTDNEP1O95476 244 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 ME1P48163 572 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 GPS2Q13227 327 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 NCAPHQ15003 741 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 MNS1Q8NEH6 495 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 TMX1Q9H3N1 280 aa15.76■□□□□ 0.11
C9orf78-205ENST00000480023 TLR7Q9NYK1 1049 aaKnown RBP15.76■□□□□ 0.11
C9orf78-205ENST00000480023 C9orf78Q9NZ63 289 aaPredicted RBP15.76■□□□□ 0.11
C9orf78-205ENST00000480023 HSP90B1P14625 803 aaKnown RBP15.75■□□□□ 0.11
C9orf78-205ENST00000480023 HDGFP51858 240 aaKnown RBP15.75■□□□□ 0.11
C9orf78-205ENST00000480023 ILDR1Q86SU0 546 aaPredicted RBP15.75■□□□□ 0.11
C9orf78-205ENST00000480023 HOMER1Q86YM7 354 aa15.75■□□□□ 0.11
C9orf78-205ENST00000480023 NEK11Q8NG66 645 aa15.75■□□□□ 0.11
C9orf78-205ENST00000480023 TRIM34Q9BYJ4 488 aa15.75■□□□□ 0.11
C9orf78-205ENST00000480023 BOLA2Q9H3K6 86 aa15.75■□□□□ 0.11
C9orf78-205ENST00000480023 PARP3Q9Y6F1 533 aa15.75■□□□□ 0.11
C9orf78-205ENST00000480023 PTPDC1A2A3K4 754 aa15.74■□□□□ 0.11
C9orf78-205ENST00000480023 IKBKBO14920 756 aa15.74■□□□□ 0.11
C9orf78-205ENST00000480023 FANCGO15287 622 aa15.74■□□□□ 0.11
C9orf78-205ENST00000480023 HMGB1P09429 215 aaKnown RBP15.74■□□□□ 0.11
C9orf78-205ENST00000480023 HOXC9P31274 260 aa15.74■□□□□ 0.11
C9orf78-205ENST00000480023 G3BP1Q13283 466 aaKnown RBP eCLIP15.74■□□□□ 0.11
C9orf78-205ENST00000480023 CC2D1AQ6P1N0 951 aaPredicted RBP15.74■□□□□ 0.11
C9orf78-205ENST00000480023 NFATC2IPQ8NCF5 419 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms