RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 EXOC6Q8TAG9 804 aa12.04□□□□□ -0.48
CD46-214ENST00000480003 NLRP3Q96P20 1036 aa12.04□□□□□ -0.48
CD46-214ENST00000480003 G3V3G9 751 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 GNAI2P04899 355 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 TGFB2P61812 414 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 ATP8B2P98198 1209 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 AAMPQ13685 434 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 ANKRD44Q8N8A2 993 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 MS4A4AQ96JQ5 239 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 LRRFIP2Q9Y608 721 aaKnown RBP12.03□□□□□ -0.48
CD46-214ENST00000480003 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 ABCC12Q96J65 1359 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 RIC1Q4ADV7 1423 aa12.03□□□□□ -0.48
CD46-214ENST00000480003 STK25O00506 426 aa12.02□□□□□ -0.49
CD46-214ENST00000480003 ST18O60284 1047 aa12.02□□□□□ -0.49
CD46-214ENST00000480003 KCNA3P22001 575 aa12.02□□□□□ -0.49
CD46-214ENST00000480003 HOXA10P31260 410 aaPredicted RBP12.02□□□□□ -0.49
CD46-214ENST00000480003 PDE6BP35913 854 aa12.02□□□□□ -0.49
CD46-214ENST00000480003 IRX6P78412 446 aaPredicted RBP12.02□□□□□ -0.49
CD46-214ENST00000480003 MTX1Q13505 466 aa12.02□□□□□ -0.49
CD46-214ENST00000480003 LMBR1LQ6UX01 489 aa12.02□□□□□ -0.49
CD46-214ENST00000480003 BICC1Q9H694 974 aaKnown RBP12.02□□□□□ -0.49
CD46-214ENST00000480003 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
CD46-214ENST00000480003 ANKRD36CQ5JPF3 1778 aa12.02□□□□□ -0.49
CD46-214ENST00000480003 NPHP1O15259 732 aa12.01□□□□□ -0.49
CD46-214ENST00000480003 SRGNP10124 158 aa12.01□□□□□ -0.49
CD46-214ENST00000480003 CTSWP56202 376 aa12.01□□□□□ -0.49
CD46-214ENST00000480003 RPAP2Q8IXW5 612 aaPredicted RBP12.01□□□□□ -0.49
CD46-214ENST00000480003 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
CD46-214ENST00000480003 AFDNP55196 1824 aaKnown RBP12□□□□□ -0.49
CD46-214ENST00000480003 RFX5P48382 616 aaPredicted RBP12□□□□□ -0.49
CD46-214ENST00000480003 CCDC152Q4G0S7 254 aa12□□□□□ -0.49
CD46-214ENST00000480003 SIRT2Q8IXJ6 389 aa12□□□□□ -0.49
CD46-214ENST00000480003 PCDHB15Q9Y5E8 787 aa12□□□□□ -0.49
CD46-214ENST00000480003 C10orf71Q711Q0 1435 aa12□□□□□ -0.49
CD46-214ENST00000480003 A0A0G2JLW4 131 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 H0YIN7 160 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 DPEP1P16444 411 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 CEP85Q6P2H3 762 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 MASTLQ96GX5 879 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 CRAMP1Q96RY5 1269 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 SYT17Q9BSW7 474 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 GREM2Q9H772 168 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 C1orf115Q9H7X2 142 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 SEC31BQ9NQW1 1179 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 RTL9Q8NET4 1388 aa11.99□□□□□ -0.49
CD46-214ENST00000480003 N4BP2Q86UW6 1770 aaPredicted RBP11.98□□□□□ -0.49
CD46-214ENST00000480003 PNMA6EA0A0J9YXQ4 647 aa11.98□□□□□ -0.49
CD46-214ENST00000480003 NPR1P16066 1061 aa11.98□□□□□ -0.49
CD46-214ENST00000480003 ITGA6P23229 1130 aa11.98□□□□□ -0.49
CD46-214ENST00000480003 CHRNA5P30532 468 aa11.98□□□□□ -0.49
CD46-214ENST00000480003 STYK1Q6J9G0 422 aa11.98□□□□□ -0.49
CD46-214ENST00000480003 C2CD5Q86YS7 1000 aa11.98□□□□□ -0.49
CD46-214ENST00000480003 RBM17Q96I25 401 aaKnown RBP11.98□□□□□ -0.49
CD46-214ENST00000480003 SNPHO15079 494 aa11.97□□□□□ -0.49
CD46-214ENST00000480003 BBOX1O75936 387 aa11.97□□□□□ -0.49
CD46-214ENST00000480003 ALDH1B1P30837 517 aa11.97□□□□□ -0.49
CD46-214ENST00000480003 RPS8P62241 208 aaKnown RBP11.97□□□□□ -0.49
CD46-214ENST00000480003 PTPN12Q05209 780 aaKnown RBP11.97□□□□□ -0.49
CD46-214ENST00000480003 ERICH6BQ5W0A0 696 aa11.97□□□□□ -0.49
CD46-214ENST00000480003 DDX46Q7L014 1031 aaKnown RBP11.97□□□□□ -0.49
CD46-214ENST00000480003 MICALL2Q8IY33 904 aa11.97□□□□□ -0.49
CD46-214ENST00000480003 CCDC85AQ96PX6 553 aaPredicted RBP11.97□□□□□ -0.49
CD46-214ENST00000480003 FHDC1Q9C0D6 1143 aaPredicted RBP11.97□□□□□ -0.49
CD46-214ENST00000480003 ANKRD18BA2A2Z9 1011 aa11.96□□□□□ -0.49
CD46-214ENST00000480003 SRGAP3O43295 1099 aa11.96□□□□□ -0.49
CD46-214ENST00000480003 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
CD46-214ENST00000480003 GRAPQ13588 217 aa11.96□□□□□ -0.49
CD46-214ENST00000480003 CCDC57Q2TAC2 916 aa11.96□□□□□ -0.49
CD46-214ENST00000480003 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
CD46-214ENST00000480003 NLGN2Q8NFZ4 835 aa11.96□□□□□ -0.49
CD46-214ENST00000480003 GRAPLQ8TC17 118 aaPredicted RBP11.96□□□□□ -0.49
CD46-214ENST00000480003 C7orf43Q8WVR3 580 aa11.96□□□□□ -0.49
CD46-214ENST00000480003 CELF1Q92879 486 aaKnown RBP11.96□□□□□ -0.49
CD46-214ENST00000480003 CNKSR1Q969H4 720 aa11.96□□□□□ -0.49
CD46-214ENST00000480003 COPRSQ9NQ92 184 aa11.96□□□□□ -0.49
CD46-214ENST00000480003 NOP58Q9Y2X3 529 aaKnown RBP11.96□□□□□ -0.49
CD46-214ENST00000480003 FBXO22Q8NEZ5 403 aa11.95□□□□□ -0.5
CD46-214ENST00000480003 RPGRQ92834 1020 aaKnown RBP11.95□□□□□ -0.5
CD46-214ENST00000480003 ZNF622Q969S3 477 aaKnown RBP eCLIP11.95□□□□□ -0.52e-9■□□□□ 9.2
CD46-214ENST00000480003 ZNF594Q96JF6 807 aaPredicted RBP11.95□□□□□ -0.5
CD46-214ENST00000480003 BSDC1Q9NW68 430 aaPredicted RBP11.95□□□□□ -0.5
CD46-214ENST00000480003 PIM2Q9P1W9 311 aa11.95□□□□□ -0.5
CD46-214ENST00000480003 CHMP3Q9Y3E7 222 aa11.95□□□□□ -0.5
CD46-214ENST00000480003 RIPOR2Q9Y4F9 1068 aa11.95□□□□□ -0.5
CD46-214ENST00000480003 ANKRD31Q8N7Z5 1873 aa11.95□□□□□ -0.5
CD46-214ENST00000480003 DDX60Q8IY21 1712 aaKnown RBP11.94□□□□□ -0.5
CD46-214ENST00000480003 HDAC1Q13547 482 aaPredicted RBP11.94□□□□□ -0.5
CD46-214ENST00000480003 ANKRD18AQ8IVF6 992 aa11.94□□□□□ -0.5
CD46-214ENST00000480003 TTLL6Q8N841 843 aa11.94□□□□□ -0.5
CD46-214ENST00000480003 KLHDC4Q8TBB5 520 aa11.94□□□□□ -0.5
CD46-214ENST00000480003 CDC5LQ99459 802 aaKnown RBP11.94□□□□□ -0.5
CD46-214ENST00000480003 MFRPQ9BY79 579 aa11.94□□□□□ -0.5
CD46-214ENST00000480003 PA2G4Q9UQ80 394 aaKnown RBP11.94□□□□□ -0.5
CD46-214ENST00000480003 KIF13BQ9NQT8 1826 aa11.93□□□□□ -0.5
CD46-214ENST00000480003 IGHDP01880 384 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms