RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 ABI2Q9NYB9 513 aaPredicted RBP10.04□□□□□ -0.8
COMMD3-212ENST00000479958 J3QW42 95 aa10.03□□□□□ -0.8
COMMD3-212ENST00000479958 ABL1P00519 1130 aa10.03□□□□□ -0.8
COMMD3-212ENST00000479958 MPSTP25325 297 aa10.03□□□□□ -0.8
COMMD3-212ENST00000479958 MZF1P28698 734 aaPredicted RBP10.03□□□□□ -0.8
COMMD3-212ENST00000479958 HYAL2Q12891 473 aa10.03□□□□□ -0.8
COMMD3-212ENST00000479958 MSL1Q68DK7 614 aa10.03□□□□□ -0.8
COMMD3-212ENST00000479958 CD163Q86VB7 1156 aa10.03□□□□□ -0.8
COMMD3-212ENST00000479958 DMRTC2Q8IXT2 367 aaPredicted RBP10.03□□□□□ -0.8
COMMD3-212ENST00000479958 NSUN5Q96P11 429 aaKnown RBP10.03□□□□□ -0.8
COMMD3-212ENST00000479958 ITGB2P05107 769 aa10.02□□□□□ -0.81
COMMD3-212ENST00000479958 ZNF438Q7Z4V0 828 aa10.02□□□□□ -0.81
COMMD3-212ENST00000479958 WFDC8Q8IUA0 241 aa10.02□□□□□ -0.81
COMMD3-212ENST00000479958 PLD4Q96BZ4 506 aa10.02□□□□□ -0.81
COMMD3-212ENST00000479958 ELP3Q9H9T3 547 aa10.02□□□□□ -0.81
COMMD3-212ENST00000479958 A0A0A0MRY4 1105 aa10.01□□□□□ -0.81
COMMD3-212ENST00000479958 NPR3P17342 541 aa10.01□□□□□ -0.81
COMMD3-212ENST00000479958 C8orf34Q49A92 452 aa10.01□□□□□ -0.81
COMMD3-212ENST00000479958 XKR5Q6UX68 686 aa10.01□□□□□ -0.81
COMMD3-212ENST00000479958 CACTIN-AS1Q8N1I8 211 aa10.01□□□□□ -0.81
COMMD3-212ENST00000479958 FAM229AH3BQW9 127 aa10□□□□□ -0.81
COMMD3-212ENST00000479958 USP5P45974 858 aa10□□□□□ -0.81
COMMD3-212ENST00000479958 DTWD1Q8N5C7 304 aa10□□□□□ -0.81
COMMD3-212ENST00000479958 C9orf172C9J069 976 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 PDGFAP04085 211 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 ELNP15502 786 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 MTMR3Q13615 1198 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 PMEPA1Q969W9 287 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 PROCP04070 461 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 CHRNA4P43681 627 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 GATA4P43694 442 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 EHHADHQ08426 723 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 GRIK5Q16478 980 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 EGFL7Q9UHF1 273 aa9.99□□□□□ -0.81
COMMD3-212ENST00000479958 GRIK4Q16099 956 aa9.98□□□□□ -0.81
COMMD3-212ENST00000479958 NCAPG2Q86XI2 1143 aa9.98□□□□□ -0.81
COMMD3-212ENST00000479958 NRG1Q02297 640 aaPredicted RBP9.97□□□□□ -0.81
COMMD3-212ENST00000479958 GDF6Q6KF10 455 aaPredicted RBP9.97□□□□□ -0.81
COMMD3-212ENST00000479958 GGNBP2Q9H3C7 697 aa9.97□□□□□ -0.81
COMMD3-212ENST00000479958 ANO2Q9NQ90 1003 aa9.97□□□□□ -0.81
COMMD3-212ENST00000479958 POLIQ9UNA4 740 aa9.97□□□□□ -0.81
COMMD3-212ENST00000479958 SMNDC1O75940 238 aaKnown RBP eCLIP9.96□□□□□ -0.82
COMMD3-212ENST00000479958 BAG6P46379 1132 aa9.96□□□□□ -0.82
COMMD3-212ENST00000479958 FMR1NBQ8N0W7 255 aaPredicted RBP9.96□□□□□ -0.82
COMMD3-212ENST00000479958 IL22RA1Q8N6P7 574 aa9.96□□□□□ -0.82
COMMD3-212ENST00000479958 MUC3BQ9H195 1237 aa9.96□□□□□ -0.82
COMMD3-212ENST00000479958 TMEM63CQ9P1W3 806 aa9.96□□□□□ -0.82
COMMD3-212ENST00000479958 CES1P23141 567 aa9.95□□□□□ -0.82
COMMD3-212ENST00000479958 ZNF211Q13398 564 aaPredicted RBP9.95□□□□□ -0.82
COMMD3-212ENST00000479958 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
COMMD3-212ENST00000479958 FBXO11Q86XK2 927 aa9.95□□□□□ -0.82
COMMD3-212ENST00000479958 DCAF11Q8TEB1 546 aa9.95□□□□□ -0.82
COMMD3-212ENST00000479958 FAM177BA6PVY3 158 aa9.94□□□□□ -0.82
COMMD3-212ENST00000479958 ICMTO60725 284 aa9.94□□□□□ -0.82
COMMD3-212ENST00000479958 KIF4AO95239 1232 aa9.94□□□□□ -0.82
COMMD3-212ENST00000479958 CCER1Q8TC90 406 aaPredicted RBP9.94□□□□□ -0.82
COMMD3-212ENST00000479958 LENG1Q96BZ8 264 aaPredicted RBP9.94□□□□□ -0.82
COMMD3-212ENST00000479958 CEP135Q66GS9 1140 aa9.93□□□□□ -0.82
COMMD3-212ENST00000479958 GLYCTKQ8IVS8 523 aa9.93□□□□□ -0.82
COMMD3-212ENST00000479958 SRA1Q9HD15 236 aaKnown RBP9.93□□□□□ -0.82
COMMD3-212ENST00000479958 CNTN3Q9P232 1028 aa9.93□□□□□ -0.82
COMMD3-212ENST00000479958 CYP2E1P05181 493 aaPredicted RBP9.92□□□□□ -0.82
COMMD3-212ENST00000479958 COL13A1Q5TAT6 717 aaPredicted RBP9.92□□□□□ -0.82
COMMD3-212ENST00000479958 MAP4K3Q8IVH8 894 aa9.92□□□□□ -0.82
COMMD3-212ENST00000479958 USP21Q9UK80 565 aa9.92□□□□□ -0.82
COMMD3-212ENST00000479958 IGF2-ASQ6U949 168 aa9.91□□□□□ -0.82
COMMD3-212ENST00000479958 C1orf127Q8N9H9 656 aa9.91□□□□□ -0.82
COMMD3-212ENST00000479958 PBX4Q9BYU1 374 aa9.91□□□□□ -0.82
COMMD3-212ENST00000479958 BRPF3Q9ULD4 1205 aa9.91□□□□□ -0.82
COMMD3-212ENST00000479958 PPME1Q9Y570 386 aa9.91□□□□□ -0.82
COMMD3-212ENST00000479958 FZD6O60353 706 aa9.9□□□□□ -0.82
COMMD3-212ENST00000479958 SELPP16109 830 aa9.9□□□□□ -0.82
COMMD3-212ENST00000479958 SERPINB4P48594 390 aa9.9□□□□□ -0.82
COMMD3-212ENST00000479958 CEP120Q8N960 986 aa9.9□□□□□ -0.82
COMMD3-212ENST00000479958 SALL4Q9UJQ4 1053 aa9.9□□□□□ -0.82
COMMD3-212ENST00000479958 TRIM33Q9UPN9 1127 aa9.9□□□□□ -0.82
COMMD3-212ENST00000479958 A6NHS1 94 aa9.9□□□□□ -0.83
COMMD3-212ENST00000479958 H3BRB1 525 aa9.9□□□□□ -0.83
COMMD3-212ENST00000479958 PHACTR2O75167 634 aa9.9□□□□□ -0.83
COMMD3-212ENST00000479958 CDC27P30260 824 aa9.9□□□□□ -0.83
COMMD3-212ENST00000479958 RASSF4Q9H2L5 321 aa9.9□□□□□ -0.83
COMMD3-212ENST00000479958 TUT1Q9H6E5 874 aaKnown RBP9.9□□□□□ -0.83
COMMD3-212ENST00000479958 CCDC87Q9NVE4 849 aa9.9□□□□□ -0.83
COMMD3-212ENST00000479958 KANSL3Q9P2N6 904 aa9.9□□□□□ -0.83
COMMD3-212ENST00000479958 ATP11AP98196 1134 aa9.89□□□□□ -0.83
COMMD3-212ENST00000479958 DOC2BQ14184 412 aa9.89□□□□□ -0.83
COMMD3-212ENST00000479958 ADGRE1Q14246 886 aa9.89□□□□□ -0.83
COMMD3-212ENST00000479958 TXNDC2Q86VQ3 553 aa9.89□□□□□ -0.83
COMMD3-212ENST00000479958 TNFRSF21O75509 655 aa9.88□□□□□ -0.83
COMMD3-212ENST00000479958 NEFLP07196 543 aa9.88□□□□□ -0.83
COMMD3-212ENST00000479958 PTPRAP18433 802 aa9.88□□□□□ -0.83
COMMD3-212ENST00000479958 FAM117BQ6P1L5 589 aa9.88□□□□□ -0.83
COMMD3-212ENST00000479958 SHISA2Q6UWI4 295 aa9.88□□□□□ -0.83
COMMD3-212ENST00000479958 SNX29Q8TEQ0 813 aa9.88□□□□□ -0.83
COMMD3-212ENST00000479958 LACRTQ9GZZ8 138 aa9.88□□□□□ -0.83
COMMD3-212ENST00000479958 K7ELQ4 463 aaPredicted RBP9.87□□□□□ -0.83
COMMD3-212ENST00000479958 NDUFB5O43674 189 aa9.87□□□□□ -0.83
COMMD3-212ENST00000479958 FURINP09958 794 aa9.87□□□□□ -0.83
COMMD3-212ENST00000479958 TXNRD3Q86VQ6 643 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms