RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 SRRTQ9BXP5 876 aaKnown RBP15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 NUTM2FA1L443 756 aa15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 SFPQP23246 707 aaKnown RBP eCLIP15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 EIF4A1P60842 406 aaKnown RBP15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 NUTM2GQ5VZR2 741 aa15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 ZNF396Q96N95 335 aaPredicted RBP15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 PA2G4Q9UQ80 394 aaKnown RBP15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 PHLPP2Q6ZVD8 1323 aa15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 VGLL3A8MV65 326 aa15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 TAF5LO75529 589 aa15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 CEBPZQ03701 1054 aaKnown RBP15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 ARMCX5Q6P1M9 558 aa15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 EAF2Q96CJ1 260 aaPredicted RBP15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 TPM1P09493 284 aa15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 ETF1P62495 437 aaKnown RBP15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 LRRN4CLQ8ND94 238 aa15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 UBXN4Q92575 508 aa15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 ORC3Q9UBD5 711 aaPredicted RBP15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 CEMIPQ8WUJ3 1361 aa15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 MYH15Q9Y2K3 1946 aa15.16■□□□□ 0.02
LYSMD4-206ENST00000479791 SASH1O94885 1247 aa15.15■□□□□ 0.02
LYSMD4-206ENST00000479791 ZNF589Q86UQ0 364 aaPredicted RBP15.15■□□□□ 0.02
LYSMD4-206ENST00000479791 C9orf78Q9NZ63 289 aaPredicted RBP15.15■□□□□ 0.02
LYSMD4-206ENST00000479791 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.15■□□□□ 0.02
LYSMD4-206ENST00000479791 NWD1Q149M9 1564 aa15.15■□□□□ 0.02
LYSMD4-206ENST00000479791 Q6ZUG5 572 aa15.15■□□□□ 0.02
LYSMD4-206ENST00000479791 TXLNBQ8N3L3 684 aa15.15■□□□□ 0.02
LYSMD4-206ENST00000479791 MUM1L1Q5H9M0 696 aa15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 FSIP1Q8NA03 581 aa15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 USP28Q96RU2 1077 aa15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 UBXN6Q9BZV1 441 aa15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 HSP90B1P14625 803 aaKnown RBP15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 SCRN1Q12765 414 aa15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 G3BP1Q13283 466 aaKnown RBP eCLIP15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 XPO4Q9C0E2 1151 aaKnown RBP15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 BOLA2Q9H3K6 86 aa15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 PFKFB2O60825 505 aa15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 TMC6Q7Z403 805 aa15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 FMR1NBQ8N0W7 255 aaPredicted RBP15.14■□□□□ 0.01
LYSMD4-206ENST00000479791 AGLP35573 1532 aa15.13■□□□□ 0.01
LYSMD4-206ENST00000479791 A0A087WWV3 80 aa15.13■□□□□ 0.01
LYSMD4-206ENST00000479791 CCDC8Q9H0W5 538 aaPredicted RBP15.13■□□□□ 0.01
LYSMD4-206ENST00000479791 EFCAB8A8MWE9 144 aa15.13■□□□□ 0.01
LYSMD4-206ENST00000479791 NSUN7Q8NE18 718 aaKnown RBP15.13■□□□□ 0.01
LYSMD4-206ENST00000479791 FTOQ9C0B1 505 aaKnown RBP eCLIP15.13■□□□□ 0.01
LYSMD4-206ENST00000479791 IFNKQ9P0W0 207 aa15.13■□□□□ 0.01
LYSMD4-206ENST00000479791 SMC2O95347 1197 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 ME1P48163 572 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 RAD51AP2Q09MP3 1159 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 MRPS27Q92552 414 aaKnown RBP15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 SDF4Q9BRK5 362 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 KIAA1468Q9P260 1216 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 FEZ2Q9UHY8 353 aaPredicted RBP15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 MED1Q15648 1581 aaPredicted RBP15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 A0A1W2PQ27 194 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 A0A1W2PQ64 194 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 A0A1W2PQD8 194 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 TADA3O75528 432 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 CCDC158Q5M9N0 1113 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 ADALQ6DHV7 355 aa15.12■□□□□ 0.01
LYSMD4-206ENST00000479791 HOXC9P31274 260 aa15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 ZRSR1Q15695 479 aaKnown RBP15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 MNS1Q8NEH6 495 aa15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 DBF4Q9UBU7 674 aaPredicted RBP15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 DNAI1Q9UI46 699 aa15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 HMGB1P09429 215 aaKnown RBP15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 TLR7Q9NYK1 1049 aaKnown RBP15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 DIP2AQ14689 1571 aa15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 NCAPD2Q15021 1401 aa15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 GPS2Q13227 327 aa15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 LRRFIP1Q32MZ4 808 aaKnown RBP15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 TRIM65Q6PJ69 517 aa15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 MAP3K2Q9Y2U5 619 aa15.11■□□□□ 0.01
LYSMD4-206ENST00000479791 UTYO14607 1347 aa15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 DPCR1Q3MIW9 517 aa15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 KSR2Q6VAB6 950 aa15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 RFX7Q2KHR2 1363 aa15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 KDM3BQ7LBC6 1761 aa15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 PTPDC1A2A3K4 754 aa15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 PSME1Q06323 249 aa15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 SYTL4Q96C24 671 aaPredicted RBP15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 RTEL1Q9NZ71 1219 aa15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 PCDHA7Q9UN72 937 aa15.1■□□□□ 0.01
LYSMD4-206ENST00000479791 COL15A1P39059 1388 aa15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 CTDNEP1O95476 244 aa15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 CYP21A2P08686 494 aa15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 ERCC4Q92889 916 aaPredicted RBP15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 ABCC6O95255 1503 aa15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 FCHSD1Q86WN1 690 aa15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 SALL1Q9NSC2 1324 aa15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 GRM8O00222 908 aa15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 POLR3GO15318 223 aaPredicted RBP15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 ANXA1P04083 346 aa15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 GORABQ5T7V8 394 aa15.09■□□□□ 0.01
LYSMD4-206ENST00000479791 CHMP4CQ96CF2 233 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms