RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 VGLL2Q8N8G2 317 aa17.45■□□□□ 0.38
CLDN18-203ENST00000479660 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
CLDN18-203ENST00000479660 NMIQ13287 307 aaPredicted RBP17.44■□□□□ 0.38
CLDN18-203ENST00000479660 SLC10A5Q5PT55 438 aa17.44■□□□□ 0.38
CLDN18-203ENST00000479660 TPTE2Q6XPS3 522 aa17.44■□□□□ 0.38
CLDN18-203ENST00000479660 FAM227BQ96M60 508 aa17.44■□□□□ 0.38
CLDN18-203ENST00000479660 LSG1Q9H089 658 aaKnown RBP17.44■□□□□ 0.38
CLDN18-203ENST00000479660 SF3B3Q15393 1217 aaKnown RBP17.43■□□□□ 0.38
CLDN18-203ENST00000479660 TXNRD1Q16881 649 aa17.43■□□□□ 0.38
CLDN18-203ENST00000479660 TTC39AQ5SRH9 613 aa17.43■□□□□ 0.38
CLDN18-203ENST00000479660 DDX46Q7L014 1031 aaKnown RBP17.43■□□□□ 0.38
CLDN18-203ENST00000479660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.43■□□□□ 0.38
CLDN18-203ENST00000479660 PAG1Q9NWQ8 432 aa17.43■□□□□ 0.38
CLDN18-203ENST00000479660 RAD50Q92878 1312 aa17.43■□□□□ 0.38
CLDN18-203ENST00000479660 LAMB2P55268 1798 aa17.43■□□□□ 0.38
CLDN18-203ENST00000479660 GOLIM4O00461 696 aa17.42■□□□□ 0.38
CLDN18-203ENST00000479660 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
CLDN18-203ENST00000479660 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
CLDN18-203ENST00000479660 ANAPC15P60006 121 aa17.42■□□□□ 0.38
CLDN18-203ENST00000479660 C3orf67Q6ZVT6 689 aa17.42■□□□□ 0.38
CLDN18-203ENST00000479660 PROM2Q8N271 834 aa17.42■□□□□ 0.38
CLDN18-203ENST00000479660 KBTBD3Q8NAB2 608 aa17.42■□□□□ 0.38
CLDN18-203ENST00000479660 HELBQ8NG08 1087 aaPredicted RBP17.42■□□□□ 0.38
CLDN18-203ENST00000479660 CDC5LQ99459 802 aaKnown RBP17.42■□□□□ 0.38
CLDN18-203ENST00000479660 PALD1Q9ULE6 856 aa17.42■□□□□ 0.38
CLDN18-203ENST00000479660 A0A0D9SFI3 127 aa17.42■□□□□ 0.38
CLDN18-203ENST00000479660 HSPA4P34932 840 aa17.42■□□□□ 0.38
CLDN18-203ENST00000479660 ABCC12Q96J65 1359 aa17.41■□□□□ 0.38
CLDN18-203ENST00000479660 C4AP0C0L4 1744 aa17.41■□□□□ 0.38
CLDN18-203ENST00000479660 PUM3Q15397 648 aaKnown RBP17.41■□□□□ 0.38
CLDN18-203ENST00000479660 SPRYD3Q8NCJ5 442 aa17.41■□□□□ 0.38
CLDN18-203ENST00000479660 NLRP3Q96P20 1036 aa17.41■□□□□ 0.38
CLDN18-203ENST00000479660 SLKQ9H2G2 1235 aaPredicted RBP17.41■□□□□ 0.38
CLDN18-203ENST00000479660 LRP5O75197 1615 aa17.41■□□□□ 0.38
CLDN18-203ENST00000479660 RFX7Q2KHR2 1363 aa17.4■□□□□ 0.38
CLDN18-203ENST00000479660 SSFA2P28290 1259 aa17.4■□□□□ 0.38
CLDN18-203ENST00000479660 FKBP4Q02790 459 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLDN18-203ENST00000479660 LPIN2Q92539 896 aa17.4■□□□□ 0.38
CLDN18-203ENST00000479660 SNRKQ9NRH2 765 aa17.4■□□□□ 0.38
CLDN18-203ENST00000479660 PLSCR1O15162 318 aa17.4■□□□□ 0.38
CLDN18-203ENST00000479660 NPHP1O15259 732 aa17.4■□□□□ 0.38
CLDN18-203ENST00000479660 APBA3O96018 575 aa17.4■□□□□ 0.38
CLDN18-203ENST00000479660 PTH1RQ03431 593 aa17.4■□□□□ 0.38
CLDN18-203ENST00000479660 NFIXQ14938 502 aa17.4■□□□□ 0.38
CLDN18-203ENST00000479660 K7ELQ4 463 aaPredicted RBP17.39■□□□□ 0.37
CLDN18-203ENST00000479660 ST18O60284 1047 aa17.39■□□□□ 0.37
CLDN18-203ENST00000479660 TAF5LO75529 589 aa17.39■□□□□ 0.37
CLDN18-203ENST00000479660 FGFR2P21802 821 aa17.39■□□□□ 0.37
CLDN18-203ENST00000479660 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
CLDN18-203ENST00000479660 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
CLDN18-203ENST00000479660 RGS17Q9UGC6 210 aaPredicted RBP17.39■□□□□ 0.37
CLDN18-203ENST00000479660 UBR3Q6ZT12 1888 aa17.39■□□□□ 0.37
CLDN18-203ENST00000479660 COL24A1Q17RW2 1714 aa17.39■□□□□ 0.37
CLDN18-203ENST00000479660 TICAM2Q86XR7 235 aa17.38■□□□□ 0.37
CLDN18-203ENST00000479660 IL17RAQ96F46 866 aa17.38■□□□□ 0.37
CLDN18-203ENST00000479660 ANP32EQ9BTT0 268 aa17.38■□□□□ 0.37
CLDN18-203ENST00000479660 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
CLDN18-203ENST00000479660 CARMIL3Q8ND23 1372 aa17.38■□□□□ 0.37
CLDN18-203ENST00000479660 SCARF1Q14162 830 aa17.38■□□□□ 0.37
CLDN18-203ENST00000479660 ANTXR1Q9H6X2 564 aa17.38■□□□□ 0.37
CLDN18-203ENST00000479660 CHGBP05060 677 aa17.37■□□□□ 0.37
CLDN18-203ENST00000479660 GYS1P13807 737 aa17.37■□□□□ 0.37
CLDN18-203ENST00000479660 SLC5A1P13866 664 aa17.37■□□□□ 0.37
CLDN18-203ENST00000479660 CHRNDQ07001 517 aa17.37■□□□□ 0.37
CLDN18-203ENST00000479660 ZNF512BQ96KM6 892 aaPredicted RBP17.37■□□□□ 0.37
CLDN18-203ENST00000479660 MED23Q9ULK4 1368 aa17.37■□□□□ 0.37
CLDN18-203ENST00000479660 NEK4P51957 841 aa17.37■□□□□ 0.37
CLDN18-203ENST00000479660 CCDC102BQ68D86 513 aa17.37■□□□□ 0.37
CLDN18-203ENST00000479660 ZNF589Q86UQ0 364 aaPredicted RBP17.37■□□□□ 0.37
CLDN18-203ENST00000479660 BSDC1Q9NW68 430 aaPredicted RBP17.37■□□□□ 0.37
CLDN18-203ENST00000479660 SNAP23O00161 211 aa17.36■□□□□ 0.37
CLDN18-203ENST00000479660 MCAMP43121 646 aa17.36■□□□□ 0.37
CLDN18-203ENST00000479660 ZAP70P43403 619 aa17.36■□□□□ 0.37
CLDN18-203ENST00000479660 MCMDC2Q4G0Z9 681 aa17.36■□□□□ 0.37
CLDN18-203ENST00000479660 POTEAQ6S8J7 498 aa17.36■□□□□ 0.37
CLDN18-203ENST00000479660 CELF1Q92879 486 aaKnown RBP17.36■□□□□ 0.37
CLDN18-203ENST00000479660 MAP4K1Q92918 833 aa17.36■□□□□ 0.37
CLDN18-203ENST00000479660 PHKA1P46020 1223 aa17.35■□□□□ 0.37
CLDN18-203ENST00000479660 KCNJ4P48050 445 aa17.35■□□□□ 0.37
CLDN18-203ENST00000479660 CNBD1Q8NA66 436 aa17.35■□□□□ 0.37
CLDN18-203ENST00000479660 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
CLDN18-203ENST00000479660 SNX14Q9Y5W7 946 aa17.35■□□□□ 0.37
CLDN18-203ENST00000479660 SPEF2Q9C093 1822 aa17.35■□□□□ 0.37
CLDN18-203ENST00000479660 HSP90AA1P07900 732 aaKnown RBP17.35■□□□□ 0.37
CLDN18-203ENST00000479660 UQCRFS1P1P0C7P4 283 aa17.35■□□□□ 0.37
CLDN18-203ENST00000479660 LRRFIP1Q32MZ4 808 aaKnown RBP17.35■□□□□ 0.37
CLDN18-203ENST00000479660 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
CLDN18-203ENST00000479660 PI16Q6UXB8 463 aa17.35■□□□□ 0.37
CLDN18-203ENST00000479660 RASEFQ8IZ41 740 aa17.35■□□□□ 0.37
CLDN18-203ENST00000479660 SEC62Q99442 399 aaKnown RBP17.35■□□□□ 0.37
CLDN18-203ENST00000479660 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
CLDN18-203ENST00000479660 RBM8AQ9Y5S9 174 aaKnown RBP17.35■□□□□ 0.37
CLDN18-203ENST00000479660 RNF113AO15541 343 aaKnown RBP17.34■□□□□ 0.37
CLDN18-203ENST00000479660 COL4A1P02462 1669 aa17.34■□□□□ 0.37
CLDN18-203ENST00000479660 RPS8P62241 208 aaKnown RBP17.34■□□□□ 0.37
CLDN18-203ENST00000479660 NECTIN1Q15223 517 aa17.34■□□□□ 0.37
CLDN18-203ENST00000479660 HELLSQ9NRZ9 838 aa17.34■□□□□ 0.37
CLDN18-203ENST00000479660 ARID4AP29374 1257 aaPredicted RBP17.33■□□□□ 0.37
CLDN18-203ENST00000479660 SLFNL1Q499Z3 407 aa17.33■□□□□ 0.36
CLDN18-203ENST00000479660 ZMYM1Q5SVZ6 1142 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms