RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 ZNF594Q96JF6 807 aaPredicted RBP6.21□□□□□ -1.42
NF1-209ENST00000479536 SASH3O75995 380 aa6.2□□□□□ -1.42
NF1-209ENST00000479536 RTN1Q16799 776 aa6.2□□□□□ -1.42
NF1-209ENST00000479536 B4GALNT3Q6L9W6 998 aa6.2□□□□□ -1.42
NF1-209ENST00000479536 AGGF1Q8N302 714 aaeCLIP6.2□□□□□ -1.42
NF1-209ENST00000479536 STAG2Q8N3U4 1231 aa6.2□□□□□ -1.42
NF1-209ENST00000479536 IFT43Q96FT9 208 aa6.2□□□□□ -1.42
NF1-209ENST00000479536 DMGDHQ9UI17 866 aaKnown RBP6.2□□□□□ -1.42
NF1-209ENST00000479536 NOVA2Q9UNW9 492 aaKnown RBP6.2□□□□□ -1.42
NF1-209ENST00000479536 BCS1LQ9Y276 419 aa6.2□□□□□ -1.42
NF1-209ENST00000479536 FAM196BA6NMK8 535 aa6.19□□□□□ -1.42
NF1-209ENST00000479536 LGR5O75473 907 aa6.19□□□□□ -1.42
NF1-209ENST00000479536 IDH3AP50213 366 aa6.19□□□□□ -1.42
NF1-209ENST00000479536 GDF6Q6KF10 455 aaPredicted RBP6.19□□□□□ -1.42
NF1-209ENST00000479536 STOML1Q9UBI4 398 aa6.19□□□□□ -1.42
NF1-209ENST00000479536 MKRN1Q9UHC7 482 aaKnown RBP6.19□□□□□ -1.42
NF1-209ENST00000479536 USP17L15C9J2P7 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L10C9JJH3 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L13C9JLJ4 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L12C9JPN9 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L11C9JVI0 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L21D6R901 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L18D6R9N7 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L22D6RA61 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L17D6RBQ6 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L19D6RCP7 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L20D6RJB6 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 ADAMTS4O75173 837 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 ARID4AP29374 1257 aaPredicted RBP6.18□□□□□ -1.42
NF1-209ENST00000479536 INPP5BP32019 993 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 USP17L24Q0WX57 530 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 CRTC2Q53ET0 693 aaPredicted RBP6.18□□□□□ -1.42
NF1-209ENST00000479536 SND1Q7KZF4 910 aaKnown RBP eCLIP6.18□□□□□ -1.42
NF1-209ENST00000479536 SIX5Q8N196 739 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 GAS2L2Q8NHY3 880 aa6.18□□□□□ -1.42
NF1-209ENST00000479536 RASA1P20936 1047 aa6.17□□□□□ -1.42
NF1-209ENST00000479536 PTK7Q13308 1070 aa6.17□□□□□ -1.42
NF1-209ENST00000479536 LARP1Q6PKG0 1096 aaKnown RBP6.17□□□□□ -1.42
NF1-209ENST00000479536 Q6ZS46 218 aa6.17□□□□□ -1.42
NF1-209ENST00000479536 IL22RA1Q8N6P7 574 aa6.17□□□□□ -1.42
NF1-209ENST00000479536 FOXD4L4Q8WXT5 416 aaPredicted RBP6.17□□□□□ -1.42
NF1-209ENST00000479536 PLD4Q96BZ4 506 aa6.17□□□□□ -1.42
NF1-209ENST00000479536 KLK14Q9P0G3 267 aa6.17□□□□□ -1.42
NF1-209ENST00000479536 GNEQ9Y223 722 aaKnown RBP6.17□□□□□ -1.42
NF1-209ENST00000479536 J3QW42 95 aa6.16□□□□□ -1.42
NF1-209ENST00000479536 GRIK1P39086 918 aa6.16□□□□□ -1.42
NF1-209ENST00000479536 ARSDP51689 593 aa6.16□□□□□ -1.42
NF1-209ENST00000479536 NRLP54845 237 aa6.16□□□□□ -1.42
NF1-209ENST00000479536 CCDC27Q2M243 656 aa6.16□□□□□ -1.42
NF1-209ENST00000479536 ZDHHC13Q8IUH4 622 aa6.16□□□□□ -1.42
NF1-209ENST00000479536 UBL7Q96S82 380 aaPredicted RBP6.16□□□□□ -1.42
NF1-209ENST00000479536 DHX15O43143 795 aaKnown RBP6.15□□□□□ -1.42
NF1-209ENST00000479536 DKK1O94907 266 aa6.15□□□□□ -1.42
NF1-209ENST00000479536 SPINK2P20155 84 aa6.15□□□□□ -1.42
NF1-209ENST00000479536 SETDB1Q15047 1291 aa6.15□□□□□ -1.42
NF1-209ENST00000479536 PHLDB3Q6NSJ2 640 aa6.15□□□□□ -1.42
NF1-209ENST00000479536 INTS5Q6P9B9 1019 aaKnown RBP6.15□□□□□ -1.42
NF1-209ENST00000479536 ANKMY2Q8IV38 441 aa6.15□□□□□ -1.42
NF1-209ENST00000479536 FAM200AQ8TCP9 573 aa6.15□□□□□ -1.42
NF1-209ENST00000479536 DCAF11Q8TEB1 546 aa6.15□□□□□ -1.42
NF1-209ENST00000479536 SRA1Q9HD15 236 aaKnown RBP6.15□□□□□ -1.42
NF1-209ENST00000479536 LOC102724428A0A0B4J2F2 783 aa6.14□□□□□ -1.43
NF1-209ENST00000479536 GHRHP01286 108 aa6.14□□□□□ -1.43
NF1-209ENST00000479536 SIK1P57059 783 aa6.14□□□□□ -1.43
NF1-209ENST00000479536 NFIAQ12857 509 aa6.14□□□□□ -1.43
NF1-209ENST00000479536 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.14□□□□□ -1.43
NF1-209ENST00000479536 MAP4K3Q8IVH8 894 aa6.14□□□□□ -1.43
NF1-209ENST00000479536 CCER1Q8TC90 406 aaPredicted RBP6.14□□□□□ -1.43
NF1-209ENST00000479536 HINFPQ9BQA5 517 aa6.14□□□□□ -1.43
NF1-209ENST00000479536 TLR7Q9NYK1 1049 aaKnown RBP6.14□□□□□ -1.43
NF1-209ENST00000479536 MICAL2O94851 1124 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 WNT11O96014 354 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 SSFA2P28290 1259 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 SEC13P55735 322 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 FAM69CQ0P6D2 419 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 DPYDQ12882 1025 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 DGKZQ13574 1117 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 TXNDC2Q86VQ3 553 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 ARMC10Q8N2F6 343 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 CLP1Q92989 425 aaKnown RBP6.13□□□□□ -1.43
NF1-209ENST00000479536 UTP4Q969X6 686 aaKnown RBP6.13□□□□□ -1.43
NF1-209ENST00000479536 NSUN5Q96P11 429 aaKnown RBP6.13□□□□□ -1.43
NF1-209ENST00000479536 C11orf16Q9NQ32 467 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 SLAIN2Q9P270 581 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 USP20Q9Y2K6 914 aa6.13□□□□□ -1.43
NF1-209ENST00000479536 PSAPP07602 524 aa6.12□□□□□ -1.43
NF1-209ENST00000479536 RBM25P49756 843 aaKnown RBP6.12□□□□□ -1.43
NF1-209ENST00000479536 DTX1Q86Y01 620 aa6.12□□□□□ -1.43
NF1-209ENST00000479536 TRIM42Q8IWZ5 723 aa6.12□□□□□ -1.43
NF1-209ENST00000479536 ZNF428Q96B54 188 aa6.12□□□□□ -1.43
NF1-209ENST00000479536 CEP41Q9BYV8 373 aa6.12□□□□□ -1.43
NF1-209ENST00000479536 RBSNQ9H1K0 784 aa6.12□□□□□ -1.43
NF1-209ENST00000479536 C7orf69Q9H7B7 122 aa6.12□□□□□ -1.43
NF1-209ENST00000479536 HMX2A2RU54 273 aa6.11□□□□□ -1.43
NF1-209ENST00000479536 ATP2B4P23634 1241 aa6.11□□□□□ -1.43
NF1-209ENST00000479536 SWI5Q1ZZU3 235 aa6.11□□□□□ -1.43
NF1-209ENST00000479536 RNF43Q68DV7 783 aa6.11□□□□□ -1.43
NF1-209ENST00000479536 ACAD11Q709F0 780 aa6.11□□□□□ -1.43
NF1-209ENST00000479536 DBNDD2Q9BQY9 259 aa6.11□□□□□ -1.43
NF1-209ENST00000479536 TRIM33Q9UPN9 1127 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms