RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
HMGCL-205ENST00000479458 COLQQ9Y215 455 aaPredicted RBP9.96□□□□□ -0.82
HMGCL-205ENST00000479458 IL16Q14005 1332 aa9.96□□□□□ -0.82
HMGCL-205ENST00000479458 RANBP2P49792 3224 aaKnown RBP9.95□□□□□ -0.82
HMGCL-205ENST00000479458 ANXA1P04083 346 aa9.95□□□□□ -0.82
HMGCL-205ENST00000479458 MYL6BP14649 208 aa9.95□□□□□ -0.82
HMGCL-205ENST00000479458 FKBP1BP68106 108 aa9.95□□□□□ -0.82
HMGCL-205ENST00000479458 DIEXFQ68CQ4 756 aaKnown RBP9.95□□□□□ -0.82
HMGCL-205ENST00000479458 NGEFQ8N5V2 710 aa9.95□□□□□ -0.82
HMGCL-205ENST00000479458 SUPT20HQ8NEM7 779 aa9.95□□□□□ -0.82
HMGCL-205ENST00000479458 NECTIN2Q92692 538 aa9.95□□□□□ -0.82
HMGCL-205ENST00000479458 DPF2Q92785 391 aa9.95□□□□□ -0.82
HMGCL-205ENST00000479458 SALL2Q9Y467 1007 aaPredicted RBP9.95□□□□□ -0.82
HMGCL-205ENST00000479458 MAP3K15Q6ZN16 1313 aa9.95□□□□□ -0.82
HMGCL-205ENST00000479458 NUP98P52948 1817 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 PAPPA2Q9BXP8 1791 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 IBTKQ9P2D0 1353 aaPredicted RBP9.94□□□□□ -0.82
HMGCL-205ENST00000479458 PITPNM2Q9BZ72 1349 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 ERVV-1B6SEH8 477 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 H7C1D1 291 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 GPR25O00155 361 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 PPIP5K2O43314 1243 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 HLFQ16534 295 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 HDGFL1Q5TGJ6 251 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 USP48Q86UV5 1035 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 WDR63Q8IWG1 891 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 TRPM4Q8TD43 1214 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 TSR2Q969E8 191 aaKnown RBP9.94□□□□□ -0.82
HMGCL-205ENST00000479458 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
HMGCL-205ENST00000479458 CNOT7Q9UIV1 285 aaKnown RBP9.94□□□□□ -0.82
HMGCL-205ENST00000479458 TM4SF4P48230 202 aa9.93□□□□□ -0.82
HMGCL-205ENST00000479458 KIF6Q6ZMV9 814 aa9.93□□□□□ -0.82
HMGCL-205ENST00000479458 KRT26Q7Z3Y9 468 aa9.93□□□□□ -0.82
HMGCL-205ENST00000479458 RASAL3Q86YV0 1011 aa9.93□□□□□ -0.82
HMGCL-205ENST00000479458 C8orf58Q8NAV2 365 aa9.93□□□□□ -0.82
HMGCL-205ENST00000479458 NYXQ9GZU5 481 aa9.93□□□□□ -0.82
HMGCL-205ENST00000479458 CHPF2Q9P2E5 772 aa9.93□□□□□ -0.82
HMGCL-205ENST00000479458 NIP7Q9Y221 180 aaKnown RBP eCLIP9.93□□□□□ -0.82
HMGCL-205ENST00000479458 ZNF521Q96K83 1311 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 FANCIQ9NVI1 1328 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 POTEFA5A3E0 1075 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 ELL2O00472 640 aaPredicted RBP9.92□□□□□ -0.82
HMGCL-205ENST00000479458 KIAA2012Q0VF49 1180 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 AOC3Q16853 763 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 COPS6Q7L5N1 327 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 TSPYL6Q8N831 410 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 XAGE3Q8WTP9 111 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 SPOCK2Q92563 424 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 BCL2L13Q9BXK5 485 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 ZBTB3Q9H5J0 574 aa9.92□□□□□ -0.82
HMGCL-205ENST00000479458 DBF4Q9UBU7 674 aaPredicted RBP9.92□□□□□ -0.82
HMGCL-205ENST00000479458 GIGYF2Q6Y7W6 1299 aaKnown RBP9.91□□□□□ -0.82
HMGCL-205ENST00000479458 RPGRQ92834 1020 aaKnown RBP9.91□□□□□ -0.82
HMGCL-205ENST00000479458 RBM17Q96I25 401 aaKnown RBP9.91□□□□□ -0.82
HMGCL-205ENST00000479458 ATP6V0A2Q9Y487 856 aa9.91□□□□□ -0.82
HMGCL-205ENST00000479458 UBN2Q6ZU65 1347 aa9.9□□□□□ -0.82
HMGCL-205ENST00000479458 PPEF1O14829 653 aaPredicted RBP9.9□□□□□ -0.82
HMGCL-205ENST00000479458 FKTNO75072 461 aa9.9□□□□□ -0.82
HMGCL-205ENST00000479458 GTF2E1P29083 439 aaPredicted RBP9.9□□□□□ -0.82
HMGCL-205ENST00000479458 AIMP1Q12904 312 aaKnown RBP9.9□□□□□ -0.82
HMGCL-205ENST00000479458 MICALL2Q8IY33 904 aa9.9□□□□□ -0.82
HMGCL-205ENST00000479458 ARMC5Q96C12 935 aa9.9□□□□□ -0.82
HMGCL-205ENST00000479458 DCPSQ96C86 337 aaKnown RBP9.9□□□□□ -0.82
HMGCL-205ENST00000479458 TMX4Q9H1E5 349 aaPredicted RBP9.9□□□□□ -0.82
HMGCL-205ENST00000479458 HYPKQ9NX55 129 aa9.9□□□□□ -0.82
HMGCL-205ENST00000479458 FARP1Q9Y4F1 1045 aaPredicted RBP9.9□□□□□ -0.82
HMGCL-205ENST00000479458 ANKRD36CQ5JPF3 1778 aa9.9□□□□□ -0.82
HMGCL-205ENST00000479458 ABCC12Q96J65 1359 aa9.89□□□□□ -0.83
HMGCL-205ENST00000479458 TBC1D8O95759 1140 aa9.89□□□□□ -0.83
HMGCL-205ENST00000479458 GPTP24298 496 aa9.89□□□□□ -0.83
HMGCL-205ENST00000479458 RPS12P25398 132 aaKnown RBP9.89□□□□□ -0.83
HMGCL-205ENST00000479458 TWISTNBQ3B726 338 aaPredicted RBP9.89□□□□□ -0.83
HMGCL-205ENST00000479458 CCDC30Q5VVM6 783 aa9.89□□□□□ -0.83
HMGCL-205ENST00000479458 ZNF34Q8IZ26 560 aa9.89□□□□□ -0.83
HMGCL-205ENST00000479458 CHMP4AQ9BY43 222 aa9.89□□□□□ -0.83
HMGCL-205ENST00000479458 FAM177BA6PVY3 158 aa9.88□□□□□ -0.83
HMGCL-205ENST00000479458 EXOSC9Q06265 439 aaKnown RBP9.88□□□□□ -0.83
HMGCL-205ENST00000479458 GOLGA2Q08379 1002 aa9.88□□□□□ -0.83
HMGCL-205ENST00000479458 PARP10Q53GL7 1025 aa9.88□□□□□ -0.83
HMGCL-205ENST00000479458 HSP90AB3PQ58FF7 597 aa9.88□□□□□ -0.83
HMGCL-205ENST00000479458 SUSD4Q5VX71 490 aa9.88□□□□□ -0.83
HMGCL-205ENST00000479458 PLBD2Q8NHP8 589 aa9.88□□□□□ -0.83
HMGCL-205ENST00000479458 MYH16Q9H6N6 1097 aa9.88□□□□□ -0.83
HMGCL-205ENST00000479458 PHAXQ9H814 394 aaKnown RBP9.88□□□□□ -0.83
HMGCL-205ENST00000479458 LAMA3Q16787 3333 aa9.88□□□□□ -0.83
HMGCL-205ENST00000479458 LAMB1P07942 1786 aa9.88□□□□□ -0.83
HMGCL-205ENST00000479458 CACNA1FO60840 1977 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 YDJCA8MPS7 323 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 ADM5C9JUS6 153 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 BBOX1O75936 387 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 RAD17O75943 681 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 NTSR2O95665 410 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 ALDH1A1P00352 501 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 NUBP1P53384 320 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 SREBF2Q12772 1141 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 TCIRG1Q13488 830 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 DLK2Q6UY11 383 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 ANKRD13DQ6ZTN6 518 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 SAMD7Q7Z3H4 446 aa9.87□□□□□ -0.83
HMGCL-205ENST00000479458 NUTM1Q86Y26 1132 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms