RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 MASTLQ96GX5 879 aa16.23■□□□□ 0.19
CHD3-210ENST00000479080 LNPKQ9C0E8 428 aa16.23■□□□□ 0.19
CHD3-210ENST00000479080 SPON1Q9HCB6 807 aa16.23■□□□□ 0.19
CHD3-210ENST00000479080 BSDC1Q9NW68 430 aaPredicted RBP16.23■□□□□ 0.19
CHD3-210ENST00000479080 FBXO3Q9UK99 471 aa16.23■□□□□ 0.19
CHD3-210ENST00000479080 SNAP23O00161 211 aa16.22■□□□□ 0.19
CHD3-210ENST00000479080 G3BP1Q13283 466 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHD3-210ENST00000479080 TAF7LQ5H9L4 462 aa16.22■□□□□ 0.19
CHD3-210ENST00000479080 STYK1Q6J9G0 422 aa16.22■□□□□ 0.19
CHD3-210ENST00000479080 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
CHD3-210ENST00000479080 KIF1BPQ96EK5 621 aa16.22■□□□□ 0.19
CHD3-210ENST00000479080 RBM17Q96I25 401 aaKnown RBP16.22■□□□□ 0.19
CHD3-210ENST00000479080 LRRCC1Q9C099 1032 aa16.22■□□□□ 0.19
CHD3-210ENST00000479080 TLR7Q9NYK1 1049 aaKnown RBP16.22■□□□□ 0.19
CHD3-210ENST00000479080 DUOX1Q9NRD9 1551 aa16.21■□□□□ 0.19
CHD3-210ENST00000479080 A0A0G2JLW4 131 aa16.21■□□□□ 0.19
CHD3-210ENST00000479080 IGHMBP2P38935 993 aaKnown RBP16.21■□□□□ 0.19
CHD3-210ENST00000479080 CHRNDQ07001 517 aa16.21■□□□□ 0.19
CHD3-210ENST00000479080 HSP90AB4PQ58FF6 505 aa16.21■□□□□ 0.19
CHD3-210ENST00000479080 NLGN2Q8NFZ4 835 aa16.21■□□□□ 0.19
CHD3-210ENST00000479080 HELBQ8NG08 1087 aaPredicted RBP16.21■□□□□ 0.19
CHD3-210ENST00000479080 EAF2Q96CJ1 260 aaPredicted RBP16.21■□□□□ 0.19
CHD3-210ENST00000479080 CNNM1Q9NRU3 951 aa16.21■□□□□ 0.19
CHD3-210ENST00000479080 MINPP1Q9UNW1 487 aa16.21■□□□□ 0.19
CHD3-210ENST00000479080 SLX4Q8IY92 1834 aa16.2■□□□□ 0.18
CHD3-210ENST00000479080 H0YIN7 160 aa16.2■□□□□ 0.18
CHD3-210ENST00000479080 FGFR2P21802 821 aa16.2■□□□□ 0.18
CHD3-210ENST00000479080 OS9Q13438 667 aaPredicted RBP16.2■□□□□ 0.18
CHD3-210ENST00000479080 BRCA1P38398 1863 aaKnown RBP16.2■□□□□ 0.18
CHD3-210ENST00000479080 IRS2Q9Y4H2 1338 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 PPEF1O14829 653 aaPredicted RBP16.19■□□□□ 0.18
CHD3-210ENST00000479080 TAF5LO75529 589 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 TNNI3KQ59H18 835 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 METTL24Q5JXM2 366 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 ERC1Q8IUD2 1116 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 C7orf43Q8WVR3 580 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 MPHOSPH8Q99549 860 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 FPGT-TNNI3KV9GXZ4 949 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 ARAP2Q8WZ64 1704 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 MROH5Q6ZUA9 1318 aa16.19■□□□□ 0.18
CHD3-210ENST00000479080 PRPF40BQ6NWY9 871 aaKnown RBP16.18■□□□□ 0.18
CHD3-210ENST00000479080 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.182e-7■■■□□ 14.7
CHD3-210ENST00000479080 GPR108Q9NPR9 543 aa16.18■□□□□ 0.18
CHD3-210ENST00000479080 CACNA1SQ13698 1873 aa16.18■□□□□ 0.18
CHD3-210ENST00000479080 PDE8BO95263 885 aa16.17■□□□□ 0.18
CHD3-210ENST00000479080 ADORA1P30542 326 aa16.17■□□□□ 0.18
CHD3-210ENST00000479080 TGFB2P61812 414 aa16.17■□□□□ 0.18
CHD3-210ENST00000479080 GPSM2P81274 684 aa16.17■□□□□ 0.18
CHD3-210ENST00000479080 DBNDD2Q9BQY9 259 aa16.17■□□□□ 0.18
CHD3-210ENST00000479080 CCDC8Q9H0W5 538 aaPredicted RBP16.17■□□□□ 0.18
CHD3-210ENST00000479080 DBNLQ9UJU6 430 aaKnown RBP16.17■□□□□ 0.18
CHD3-210ENST00000479080 A0A1B0GUL7 405 aa16.16■□□□□ 0.18
CHD3-210ENST00000479080 BBOX1O75936 387 aa16.16■□□□□ 0.18
CHD3-210ENST00000479080 KLRK1P26718 216 aa16.16■□□□□ 0.18
CHD3-210ENST00000479080 TIMM10P62072 90 aa16.16■□□□□ 0.18
CHD3-210ENST00000479080 TSHZ3Q63HK5 1081 aa16.16■□□□□ 0.18
CHD3-210ENST00000479080 PLEKHM2Q8IWE5 1019 aa16.16■□□□□ 0.18
CHD3-210ENST00000479080 FHDC1Q9C0D6 1143 aaPredicted RBP16.16■□□□□ 0.18
CHD3-210ENST00000479080 CEP126Q9P2H0 1117 aa16.16■□□□□ 0.18
CHD3-210ENST00000479080 ATP6V0A2Q9Y487 856 aa16.16■□□□□ 0.18
CHD3-210ENST00000479080 ALDH1B1P30837 517 aa16.15■□□□□ 0.18
CHD3-210ENST00000479080 AACSQ86V21 672 aa16.15■□□□□ 0.18
CHD3-210ENST00000479080 SP8Q8IXZ3 490 aa16.15■□□□□ 0.18
CHD3-210ENST00000479080 KLHL34Q8N239 644 aa16.15■□□□□ 0.18
CHD3-210ENST00000479080 GPR101Q96P66 508 aaPredicted RBP16.15■□□□□ 0.18
CHD3-210ENST00000479080 BCL11AQ9H165 835 aa16.15■□□□□ 0.18
CHD3-210ENST00000479080 ATP2B3Q16720 1220 aa16.14■□□□□ 0.17
CHD3-210ENST00000479080 CLASRPQ8N2M8 674 aaKnown RBP16.14■□□□□ 0.17
CHD3-210ENST00000479080 CNKSR1Q969H4 720 aa16.14■□□□□ 0.17
CHD3-210ENST00000479080 PPP1R1BQ9UD71 204 aaPredicted RBP16.14■□□□□ 0.17
CHD3-210ENST00000479080 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
CHD3-210ENST00000479080 RGS3P49796 1198 aa16.13■□□□□ 0.17
CHD3-210ENST00000479080 PUM3Q15397 648 aaKnown RBP16.13■□□□□ 0.17
CHD3-210ENST00000479080 TMC4Q7Z404 712 aa16.13■□□□□ 0.17
CHD3-210ENST00000479080 TXNRD3Q86VQ6 643 aa16.13■□□□□ 0.17
CHD3-210ENST00000479080 TTLL6Q8N841 843 aa16.13■□□□□ 0.17
CHD3-210ENST00000479080 PI4K2BQ8TCG2 481 aa16.13■□□□□ 0.17
CHD3-210ENST00000479080 PODXL2Q9NZ53 605 aa16.13■□□□□ 0.17
CHD3-210ENST00000479080 STAP2Q9UGK3 403 aa16.13■□□□□ 0.17
CHD3-210ENST00000479080 POLLQ9UGP5 575 aa16.13■□□□□ 0.17
CHD3-210ENST00000479080 PDE1AP54750 535 aa16.12■□□□□ 0.17
CHD3-210ENST00000479080 LPIN2Q92539 896 aa16.12■□□□□ 0.17
CHD3-210ENST00000479080 XAGE2Q96GT9 111 aa16.12■□□□□ 0.17
CHD3-210ENST00000479080 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
CHD3-210ENST00000479080 XDHP47989 1333 aa16.12■□□□□ 0.17
CHD3-210ENST00000479080 COL1A1P02452 1464 aaPredicted RBP16.11■□□□□ 0.17
CHD3-210ENST00000479080 C21orf2O43822 256 aa16.11■□□□□ 0.17
CHD3-210ENST00000479080 GSPT1P15170 499 aaKnown RBP16.11■□□□□ 0.17
CHD3-210ENST00000479080 MX1P20591 662 aa16.11■□□□□ 0.17
CHD3-210ENST00000479080 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
CHD3-210ENST00000479080 TBC1D16Q8TBP0 767 aa16.11■□□□□ 0.17
CHD3-210ENST00000479080 ANKRD2Q9GZV1 360 aa16.11■□□□□ 0.17
CHD3-210ENST00000479080 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
CHD3-210ENST00000479080 PIM2Q9P1W9 311 aa16.11■□□□□ 0.17
CHD3-210ENST00000479080 SYT17Q9BSW7 474 aa16.1■□□□□ 0.17
CHD3-210ENST00000479080 AKAP2Q9Y2D5 859 aa16.1■□□□□ 0.17
CHD3-210ENST00000479080 ZNF804BA4D1E1 1349 aa16.1■□□□□ 0.17
CHD3-210ENST00000479080 COL4A5P29400 1685 aa16.09■□□□□ 0.17
CHD3-210ENST00000479080 UFL1O94874 794 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms