RNA–Protein interactions for RNA: ENST00000478462.5

MSL3-214, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-214ENST00000478462 ITPRIPQ8IWB1 547 aa9.58□□□□□ -0.88
MSL3-214ENST00000478462 RBM17Q96I25 401 aaKnown RBP9.58□□□□□ -0.88
MSL3-214ENST00000478462 TNNQ9UQP3 1299 aa9.58□□□□□ -0.88
MSL3-214ENST00000478462 COL11A2P13942 1736 aaPredicted RBP9.58□□□□□ -0.88
MSL3-214ENST00000478462 KIAA1551Q9HCM1 1747 aa9.58□□□□□ -0.88
MSL3-214ENST00000478462 TNRC6CQ9HCJ0 1690 aaKnown RBP9.58□□□□□ -0.88
MSL3-214ENST00000478462 RIC1Q4ADV7 1423 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 SLX4Q8IY92 1834 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 NBPF7P0C2Y1 421 aaPredicted RBP9.57□□□□□ -0.88
MSL3-214ENST00000478462 KCNA3P22001 575 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 ALDH1B1P30837 517 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 MKRN3Q13064 507 aaKnown RBP9.57□□□□□ -0.88
MSL3-214ENST00000478462 GPR162Q16538 588 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 CRY2Q49AN0 593 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 CCDC152Q4G0S7 254 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 DALRD3Q5D0E6 543 aaKnown RBP9.57□□□□□ -0.88
MSL3-214ENST00000478462 STYK1Q6J9G0 422 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 C3orf67Q6ZVT6 689 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 DDX46Q7L014 1031 aaKnown RBP9.57□□□□□ -0.88
MSL3-214ENST00000478462 TMEM57Q8N5G2 664 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 TTLL6Q8N841 843 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 PANK1Q8TE04 598 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 CNKSR1Q969H4 720 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 USP44Q9H0E7 712 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 HDAC5Q9UQL6 1122 aa9.57□□□□□ -0.88
MSL3-214ENST00000478462 UBTFL1P0CB47 393 aaPredicted RBP9.56□□□□□ -0.88
MSL3-214ENST00000478462 RLBP1P12271 317 aa9.56□□□□□ -0.88
MSL3-214ENST00000478462 CASP7P55210 303 aa9.56□□□□□ -0.88
MSL3-214ENST00000478462 SF3B3Q15393 1217 aaKnown RBP9.56□□□□□ -0.88
MSL3-214ENST00000478462 EFCAB3Q8N7B9 438 aa9.56□□□□□ -0.88
MSL3-214ENST00000478462 CCDC85AQ96PX6 553 aaPredicted RBP9.56□□□□□ -0.88
MSL3-214ENST00000478462 PLA2G12BQ9BX93 195 aa9.56□□□□□ -0.88
MSL3-214ENST00000478462 BCS1LQ9Y276 419 aa9.56□□□□□ -0.88
MSL3-214ENST00000478462 CHMP3Q9Y3E7 222 aa9.56□□□□□ -0.88
MSL3-214ENST00000478462 ARFGEF1Q9Y6D6 1849 aa9.56□□□□□ -0.88
MSL3-214ENST00000478462 UTYO14607 1347 aa9.56□□□□□ -0.88
MSL3-214ENST00000478462 GNAI3P08754 354 aa9.55□□□□□ -0.88
MSL3-214ENST00000478462 HOXA10P31260 410 aaPredicted RBP9.55□□□□□ -0.88
MSL3-214ENST00000478462 ATN1P54259 1190 aaPredicted RBP9.55□□□□□ -0.88
MSL3-214ENST00000478462 CTSWP56202 376 aa9.55□□□□□ -0.88
MSL3-214ENST00000478462 PDE3AQ14432 1141 aa9.55□□□□□ -0.88
MSL3-214ENST00000478462 TTLL11Q8NHH1 800 aa9.55□□□□□ -0.88
MSL3-214ENST00000478462 SUCLG2Q96I99 432 aa9.55□□□□□ -0.88
MSL3-214ENST00000478462 CRAMP1Q96RY5 1269 aa9.55□□□□□ -0.88
MSL3-214ENST00000478462 TMX4Q9H1E5 349 aaPredicted RBP9.55□□□□□ -0.88
MSL3-214ENST00000478462 GOLGB1Q14789 3259 aaKnown RBP9.55□□□□□ -0.88
MSL3-214ENST00000478462 CCDC88AQ3V6T2 1871 aa9.55□□□□□ -0.88
MSL3-214ENST00000478462 SPEF2Q9C093 1822 aa9.54□□□□□ -0.88
MSL3-214ENST00000478462 BBOX1O75936 387 aa9.54□□□□□ -0.88
MSL3-214ENST00000478462 RRP1P56182 461 aaKnown RBP9.54□□□□□ -0.88
MSL3-214ENST00000478462 FOXO4P98177 505 aa9.54□□□□□ -0.88
MSL3-214ENST00000478462 PRPF40BQ6NWY9 871 aaKnown RBP9.54□□□□□ -0.88
MSL3-214ENST00000478462 LMBR1LQ6UX01 489 aa9.54□□□□□ -0.88
MSL3-214ENST00000478462 MEIS3Q99687 375 aa9.54□□□□□ -0.88
MSL3-214ENST00000478462 CHMP4BQ9H444 224 aaKnown RBP9.54□□□□□ -0.88
MSL3-214ENST00000478462 COG6Q9Y2V7 657 aa9.54□□□□□ -0.88
MSL3-214ENST00000478462 SUPT16HQ9Y5B9 1047 aaKnown RBP9.54□□□□□ -0.88
MSL3-214ENST00000478462 ANKRD18BA2A2Z9 1011 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 GRIN3BO60391 1043 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 GNAI2P04899 355 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 CSF1RP07333 972 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 RPS8P62241 208 aaKnown RBP9.53□□□□□ -0.88
MSL3-214ENST00000478462 IFIT5Q13325 482 aaKnown RBP9.53□□□□□ -0.88
MSL3-214ENST00000478462 GRAPQ13588 217 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 MVPQ14764 893 aaKnown RBP9.53□□□□□ -0.88
MSL3-214ENST00000478462 CCDC57Q2TAC2 916 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 EPHA10Q5JZY3 1008 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 C20orf194Q5TEA3 1177 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 GRAPLQ8TC17 118 aaPredicted RBP9.53□□□□□ -0.88
MSL3-214ENST00000478462 CDC5LQ99459 802 aaKnown RBP9.53□□□□□ -0.88
MSL3-214ENST00000478462 BICC1Q9H694 974 aaKnown RBP9.53□□□□□ -0.88
MSL3-214ENST00000478462 GREM2Q9H772 168 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 SEC31BQ9NQW1 1179 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
MSL3-214ENST00000478462 LRRFIP2Q9Y608 721 aaKnown RBP9.53□□□□□ -0.88
MSL3-214ENST00000478462 CHD4Q14839 1912 aa9.52□□□□□ -0.88
MSL3-214ENST00000478462 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.89
MSL3-214ENST00000478462 ZBTB7BO15156 539 aaPredicted RBP9.52□□□□□ -0.89
MSL3-214ENST00000478462 C21orf2O43822 256 aa9.52□□□□□ -0.89
MSL3-214ENST00000478462 CENPBP07199 599 aaPredicted RBP9.52□□□□□ -0.89
MSL3-214ENST00000478462 YBX3P16989 372 aaKnown RBP eCLIP9.52□□□□□ -0.89
MSL3-214ENST00000478462 ITGA6P23229 1130 aa9.52□□□□□ -0.89
MSL3-214ENST00000478462 FAM161AQ3B820 660 aa9.52□□□□□ -0.89
MSL3-214ENST00000478462 TAF7LQ5H9L4 462 aa9.52□□□□□ -0.89
MSL3-214ENST00000478462 SOGA3Q5TF21 947 aa9.52□□□□□ -0.89
MSL3-214ENST00000478462 ARHGAP27Q6ZUM4 889 aa9.52□□□□□ -0.89
MSL3-214ENST00000478462 TMC4Q7Z404 712 aa9.52□□□□□ -0.89
MSL3-214ENST00000478462 ANKRD18AQ8IVF6 992 aa9.52□□□□□ -0.89
MSL3-214ENST00000478462 CELF1Q92879 486 aaKnown RBP9.52□□□□□ -0.89
MSL3-214ENST00000478462 KAZALD1Q96I82 304 aa9.52□□□□□ -0.89
MSL3-214ENST00000478462 RTL9Q8NET4 1388 aa9.51□□□□□ -0.89
MSL3-214ENST00000478462 IGHMBP2P38935 993 aaKnown RBP9.51□□□□□ -0.89
MSL3-214ENST00000478462 CC2D2BQ6DHV5 1058 aa9.51□□□□□ -0.89
MSL3-214ENST00000478462 ANKRD44Q8N8A2 993 aa9.51□□□□□ -0.89
MSL3-214ENST00000478462 MPHOSPH8Q99549 860 aa9.51□□□□□ -0.89
MSL3-214ENST00000478462 ATP6V0A2Q9Y487 856 aa9.51□□□□□ -0.89
MSL3-214ENST00000478462 SBF1O95248 1867 aa9.51□□□□□ -0.89
MSL3-214ENST00000478462 FER1L6Q2WGJ9 1857 aa9.51□□□□□ -0.89
MSL3-214ENST00000478462 RABL6Q3YEC7 729 aaPredicted RBP9.5□□□□□ -0.89
MSL3-214ENST00000478462 CCDC93Q567U6 631 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms