RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 ZBTB39O15060 712 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 MMP20O60882 483 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 GHRHP01286 108 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 NID1P14543 1247 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 NPR3P17342 541 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 MZF1P28698 734 aaPredicted RBP9.82□□□□□ -0.84
ITGA4-209ENST00000478440 USP5P45974 858 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 FKBP4Q02790 459 aaKnown RBP eCLIP9.82□□□□□ -0.84
ITGA4-209ENST00000478440 TRIP4Q15650 581 aaPredicted RBP9.82□□□□□ -0.84
ITGA4-209ENST00000478440 PLA2G4EQ3MJ16 856 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 PHLDB3Q6NSJ2 640 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 RETREG2Q8NC44 543 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 NUDT8Q8WV74 236 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 EGFL7Q9UHF1 273 aa9.82□□□□□ -0.84
ITGA4-209ENST00000478440 LOC102724428A0A0B4J2F2 783 aa9.81□□□□□ -0.84
ITGA4-209ENST00000478440 EIF2AK2P19525 551 aaKnown RBP9.81□□□□□ -0.84
ITGA4-209ENST00000478440 EIF1AXP47813 144 aaKnown RBP9.81□□□□□ -0.84
ITGA4-209ENST00000478440 SIK1P57059 783 aa9.81□□□□□ -0.84
ITGA4-209ENST00000478440 RAC1P63000 192 aa9.81□□□□□ -0.84
ITGA4-209ENST00000478440 AAMPQ13685 434 aa9.81□□□□□ -0.84
ITGA4-209ENST00000478440 TRAPPC3LQ5T215 181 aa9.81□□□□□ -0.84
ITGA4-209ENST00000478440 NUDT16Q96DE0 195 aaKnown RBP9.81□□□□□ -0.84
ITGA4-209ENST00000478440 NACC1Q96RE7 527 aa9.81□□□□□ -0.84
ITGA4-209ENST00000478440 ABI2Q9NYB9 513 aaPredicted RBP9.81□□□□□ -0.84
ITGA4-209ENST00000478440 NAGPAQ9UK23 515 aa9.81□□□□□ -0.84
ITGA4-209ENST00000478440 MROH2BQ7Z745 1585 aa9.8□□□□□ -0.84
ITGA4-209ENST00000478440 ZBTB42B2RXF5 422 aa9.8□□□□□ -0.84
ITGA4-209ENST00000478440 ABL1P00519 1130 aa9.8□□□□□ -0.84
ITGA4-209ENST00000478440 MPSTP25325 297 aa9.8□□□□□ -0.84
ITGA4-209ENST00000478440 CACTIN-AS1Q8N1I8 211 aa9.8□□□□□ -0.84
ITGA4-209ENST00000478440 OR13H1Q8NG92 308 aa9.8□□□□□ -0.84
ITGA4-209ENST00000478440 SPACA7Q96KW9 195 aa9.8□□□□□ -0.84
ITGA4-209ENST00000478440 KRBA1A5PL33 1030 aa9.79□□□□□ -0.84
ITGA4-209ENST00000478440 CARNS1A5YM72 827 aa9.79□□□□□ -0.84
ITGA4-209ENST00000478440 APBA3O96018 575 aa9.79□□□□□ -0.84
ITGA4-209ENST00000478440 SCNN1AP37088 669 aa9.79□□□□□ -0.84
ITGA4-209ENST00000478440 AFF1P51825 1210 aaKnown RBP9.79□□□□□ -0.84
ITGA4-209ENST00000478440 MLLT1Q03111 559 aaPredicted RBP9.79□□□□□ -0.84
ITGA4-209ENST00000478440 DNM1Q05193 864 aaKnown RBP9.79□□□□□ -0.84
ITGA4-209ENST00000478440 HYAL2Q12891 473 aa9.79□□□□□ -0.84
ITGA4-209ENST00000478440 COL9A3Q14050 684 aaPredicted RBP9.79□□□□□ -0.84
ITGA4-209ENST00000478440 PERM1Q5SV97 790 aa9.79□□□□□ -0.84
ITGA4-209ENST00000478440 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
ITGA4-209ENST00000478440 ZNF438Q7Z4V0 828 aa9.79□□□□□ -0.84
ITGA4-209ENST00000478440 EDEM1Q92611 657 aa9.79□□□□□ -0.84
ITGA4-209ENST00000478440 LPIN3Q9BQK8 851 aa9.79□□□□□ -0.84
ITGA4-209ENST00000478440 EHHADHQ08426 723 aa9.78□□□□□ -0.84
ITGA4-209ENST00000478440 XKR5Q6UX68 686 aa9.78□□□□□ -0.84
ITGA4-209ENST00000478440 ATCAYQ86WG3 371 aa9.78□□□□□ -0.84
ITGA4-209ENST00000478440 PDGFAP04085 211 aa9.77□□□□□ -0.85
ITGA4-209ENST00000478440 DTWD1Q8N5C7 304 aa9.77□□□□□ -0.85
ITGA4-209ENST00000478440 PMEPA1Q969W9 287 aa9.77□□□□□ -0.85
ITGA4-209ENST00000478440 PLD4Q96BZ4 506 aa9.77□□□□□ -0.85
ITGA4-209ENST00000478440 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.85
ITGA4-209ENST00000478440 KRTAP4-12Q9BQ66 201 aa9.77□□□□□ -0.85
ITGA4-209ENST00000478440 SMG9Q9H0W8 520 aaKnown RBP9.77□□□□□ -0.85
ITGA4-209ENST00000478440 ELP3Q9H9T3 547 aa9.77□□□□□ -0.85
ITGA4-209ENST00000478440 MRC2Q9UBG0 1479 aa9.77□□□□□ -0.85
ITGA4-209ENST00000478440 C8orf34Q49A92 452 aa9.76□□□□□ -0.85
ITGA4-209ENST00000478440 MSL1Q68DK7 614 aa9.76□□□□□ -0.85
ITGA4-209ENST00000478440 HFE2Q6ZVN8 426 aa9.76□□□□□ -0.85
ITGA4-209ENST00000478440 WFDC8Q8IUA0 241 aa9.76□□□□□ -0.85
ITGA4-209ENST00000478440 CCER1Q8TC90 406 aaPredicted RBP9.76□□□□□ -0.85
ITGA4-209ENST00000478440 DCAF11Q8TEB1 546 aa9.76□□□□□ -0.85
ITGA4-209ENST00000478440 NSUN5Q96P11 429 aaKnown RBP9.76□□□□□ -0.85
ITGA4-209ENST00000478440 ELNP15502 786 aa9.75□□□□□ -0.85
ITGA4-209ENST00000478440 MTMR3Q13615 1198 aa9.75□□□□□ -0.85
ITGA4-209ENST00000478440 KRTAP9-9Q9BYP9 154 aa9.75□□□□□ -0.85
ITGA4-209ENST00000478440 KRTAP9-4Q9BYQ2 154 aa9.75□□□□□ -0.85
ITGA4-209ENST00000478440 WIZO95785 1651 aa9.74□□□□□ -0.85
ITGA4-209ENST00000478440 ICMTO60725 284 aa9.74□□□□□ -0.85
ITGA4-209ENST00000478440 GLYCTKQ8IVS8 523 aa9.74□□□□□ -0.85
ITGA4-209ENST00000478440 A0A0A0MRY4 1105 aa9.73□□□□□ -0.85
ITGA4-209ENST00000478440 J3QW42 95 aa9.73□□□□□ -0.85
ITGA4-209ENST00000478440 KIF4AO95239 1232 aa9.73□□□□□ -0.85
ITGA4-209ENST00000478440 ZNF211Q13398 564 aaPredicted RBP9.73□□□□□ -0.85
ITGA4-209ENST00000478440 DMRTC2Q8IXT2 367 aaPredicted RBP9.73□□□□□ -0.85
ITGA4-209ENST00000478440 MUC3BQ9H195 1237 aa9.73□□□□□ -0.85
ITGA4-209ENST00000478440 SRA1Q9HD15 236 aaKnown RBP9.73□□□□□ -0.85
ITGA4-209ENST00000478440 POLIQ9UNA4 740 aa9.73□□□□□ -0.85
ITGA4-209ENST00000478440 CADPSQ9ULU8 1353 aa9.73□□□□□ -0.85
ITGA4-209ENST00000478440 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
ITGA4-209ENST00000478440 FAM177BA6PVY3 158 aa9.72□□□□□ -0.85
ITGA4-209ENST00000478440 BTBD11A6QL63 1104 aa9.72□□□□□ -0.85
ITGA4-209ENST00000478440 C1QTNF9BB2RNN3 333 aa9.72□□□□□ -0.85
ITGA4-209ENST00000478440 C9orf172C9J069 976 aa9.72□□□□□ -0.85
ITGA4-209ENST00000478440 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
ITGA4-209ENST00000478440 SMNDC1O75940 238 aaKnown RBP eCLIP9.72□□□□□ -0.85
ITGA4-209ENST00000478440 CD163Q86VB7 1156 aa9.72□□□□□ -0.85
ITGA4-209ENST00000478440 WDR62O43379 1518 aa9.72□□□□□ -0.85
ITGA4-209ENST00000478440 H3BRB1 525 aa9.71□□□□□ -0.86
ITGA4-209ENST00000478440 NRG1Q02297 640 aaPredicted RBP9.71□□□□□ -0.86
ITGA4-209ENST00000478440 GRIK5Q16478 980 aa9.71□□□□□ -0.86
ITGA4-209ENST00000478440 NCAPG2Q86XI2 1143 aa9.71□□□□□ -0.86
ITGA4-209ENST00000478440 MAP4K3Q8IVH8 894 aa9.71□□□□□ -0.86
ITGA4-209ENST00000478440 TUT1Q9H6E5 874 aaKnown RBP9.71□□□□□ -0.86
ITGA4-209ENST00000478440 ANO2Q9NQ90 1003 aa9.71□□□□□ -0.86
ITGA4-209ENST00000478440 TMEM63CQ9P1W3 806 aa9.71□□□□□ -0.86
ITGA4-209ENST00000478440 BRD1O95696 1058 aa9.7□□□□□ -0.86
ITGA4-209ENST00000478440 CES1P23141 567 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms