RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 SLC10A5Q5PT55 438 aa14.44□□□□□ -0.1
CBWD3-206ENST00000478048 MEIS3Q99687 375 aa14.44□□□□□ -0.1
CBWD3-206ENST00000478048 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
CBWD3-206ENST00000478048 MS4A1P11836 297 aa14.44□□□□□ -0.1
CBWD3-206ENST00000478048 BRIP1Q9BX63 1249 aa14.44□□□□□ -0.1
CBWD3-206ENST00000478048 UTYO14607 1347 aa14.43□□□□□ -0.1
CBWD3-206ENST00000478048 CDHR2Q9BYE9 1310 aa14.43□□□□□ -0.1
CBWD3-206ENST00000478048 MVPQ14764 893 aaKnown RBP14.43□□□□□ -0.1
CBWD3-206ENST00000478048 FHDC1Q9C0D6 1143 aaPredicted RBP14.43□□□□□ -0.1
CBWD3-206ENST00000478048 LAMB2P55268 1798 aa14.43□□□□□ -0.1
CBWD3-206ENST00000478048 KAZALD1Q96I82 304 aa14.42□□□□□ -0.1
CBWD3-206ENST00000478048 SUCLG2Q96I99 432 aa14.42□□□□□ -0.1
CBWD3-206ENST00000478048 ZBTB7BO15156 539 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-206ENST00000478048 PDE8AO60658 829 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 CHRNA5P30532 468 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 MMRN1Q13201 1228 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 EPHA10Q5JZY3 1008 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 NLGN2Q8NFZ4 835 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 NLRP3Q96P20 1036 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 CD2APQ9Y5K6 639 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 COL11A2P13942 1736 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-206ENST00000478048 KIAA1551Q9HCM1 1747 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 MYH3P11055 1940 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 A0A0G2JLW4 131 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 PDE6BP35913 854 aa14.41□□□□□ -0.1
CBWD3-206ENST00000478048 CCDC85AQ96PX6 553 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-206ENST00000478048 RIC1Q4ADV7 1423 aa14.4□□□□□ -0.1
CBWD3-206ENST00000478048 POTEB3A0JP26 581 aa14.4□□□□□ -0.1
CBWD3-206ENST00000478048 KLRG2A4D1S0 409 aaPredicted RBP14.4□□□□□ -0.1
CBWD3-206ENST00000478048 UBTFL1P0CB47 393 aaPredicted RBP14.4□□□□□ -0.1
CBWD3-206ENST00000478048 DPEP1P16444 411 aa14.4□□□□□ -0.1
CBWD3-206ENST00000478048 FOXO4P98177 505 aa14.4□□□□□ -0.1
CBWD3-206ENST00000478048 POTEBQ6S5H4 581 aa14.4□□□□□ -0.1
CBWD3-206ENST00000478048 C2CD5Q86YS7 1000 aa14.4□□□□□ -0.1
CBWD3-206ENST00000478048 SYT17Q9BSW7 474 aa14.4□□□□□ -0.1
CBWD3-206ENST00000478048 PLA2G12BQ9BX93 195 aa14.4□□□□□ -0.1
CBWD3-206ENST00000478048 TAF1P21675 1872 aa14.39□□□□□ -0.11
CBWD3-206ENST00000478048 ECM2O94769 699 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-206ENST00000478048 IRX6P78412 446 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-206ENST00000478048 CRY2Q49AN0 593 aa14.39□□□□□ -0.11
CBWD3-206ENST00000478048 CRBNQ96SW2 442 aa14.39□□□□□ -0.11
CBWD3-206ENST00000478048 BICC1Q9H694 974 aaKnown RBP14.39□□□□□ -0.11
CBWD3-206ENST00000478048 GOLGB1Q14789 3259 aaKnown RBP14.39□□□□□ -0.11
CBWD3-206ENST00000478048 GNAI3P08754 354 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 SRGNP10124 158 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 KCNA3P22001 575 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 CTSWP56202 376 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 TGFB2P61812 414 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 SF3B3Q15393 1217 aaKnown RBP14.38□□□□□ -0.11
CBWD3-206ENST00000478048 TTLL11Q8NHH1 800 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 C1orf115Q9H7X2 142 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 WWC3Q9ULE0 1092 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 DDX19BQ9UMR2 479 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 LRRFIP2Q9Y608 721 aaKnown RBP14.38□□□□□ -0.11
CBWD3-206ENST00000478048 STK24Q9Y6E0 443 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 H0YIN7 160 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 TMEM92Q6UXU6 159 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 ANKRD44Q8N8A2 993 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 ZSWIM6Q9HCJ5 1215 aa14.38□□□□□ -0.11
CBWD3-206ENST00000478048 COL4A1P02462 1669 aa14.37□□□□□ -0.11
CBWD3-206ENST00000478048 CSF1RP07333 972 aa14.37□□□□□ -0.11
CBWD3-206ENST00000478048 LMBR1LQ6UX01 489 aa14.37□□□□□ -0.11
CBWD3-206ENST00000478048 ZNF622Q969S3 477 aaKnown RBP eCLIP14.37□□□□□ -0.11
CBWD3-206ENST00000478048 SEC31BQ9NQW1 1179 aa14.37□□□□□ -0.11
CBWD3-206ENST00000478048 DLEC1Q9Y238 1755 aa14.36□□□□□ -0.11
CBWD3-206ENST00000478048 HSP90B1P14625 803 aaKnown RBP14.36□□□□□ -0.11
CBWD3-206ENST00000478048 FAM161AQ3B820 660 aa14.36□□□□□ -0.11
CBWD3-206ENST00000478048 MASTLQ96GX5 879 aa14.36□□□□□ -0.11
CBWD3-206ENST00000478048 GREM2Q9H772 168 aa14.36□□□□□ -0.11
CBWD3-206ENST00000478048 ZBTB40Q9NUA8 1239 aa14.36□□□□□ -0.11
CBWD3-206ENST00000478048 CACNA1SQ13698 1873 aa14.36□□□□□ -0.11
CBWD3-206ENST00000478048 BRCA1P38398 1863 aaKnown RBP14.35□□□□□ -0.11
CBWD3-206ENST00000478048 GNAI2P04899 355 aa14.35□□□□□ -0.11
CBWD3-206ENST00000478048 NPR1P16066 1061 aa14.35□□□□□ -0.11
CBWD3-206ENST00000478048 RABL6Q3YEC7 729 aaPredicted RBP14.35□□□□□ -0.11
CBWD3-206ENST00000478048 CCDC152Q4G0S7 254 aa14.35□□□□□ -0.11
CBWD3-206ENST00000478048 RPGRQ92834 1020 aaKnown RBP14.35□□□□□ -0.11
CBWD3-206ENST00000478048 KRTAP3-3Q9BYR6 98 aa14.35□□□□□ -0.11
CBWD3-206ENST00000478048 KRTAP3-2Q9BYR7 98 aa14.35□□□□□ -0.11
CBWD3-206ENST00000478048 CHMP3Q9Y3E7 222 aa14.35□□□□□ -0.11
CBWD3-206ENST00000478048 STK25O00506 426 aa14.35□□□□□ -0.11
CBWD3-206ENST00000478048 HOXA10P31260 410 aaPredicted RBP14.35□□□□□ -0.11
CBWD3-206ENST00000478048 SLC51AQ86UW1 340 aa14.35□□□□□ -0.11
CBWD3-206ENST00000478048 FBXO22Q8NEZ5 403 aa14.35□□□□□ -0.11
CBWD3-206ENST00000478048 PDZRN3Q9UPQ7 1066 aa14.35□□□□□ -0.11
CBWD3-206ENST00000478048 SLX4Q8IY92 1834 aa14.34□□□□□ -0.11
CBWD3-206ENST00000478048 STYK1Q6J9G0 422 aa14.34□□□□□ -0.11
CBWD3-206ENST00000478048 DDX46Q7L014 1031 aaKnown RBP14.34□□□□□ -0.11
CBWD3-206ENST00000478048 EXOC6Q8TAG9 804 aa14.34□□□□□ -0.11
CBWD3-206ENST00000478048 CELF1Q92879 486 aaKnown RBP14.34□□□□□ -0.11
CBWD3-206ENST00000478048 RBM17Q96I25 401 aaKnown RBP14.34□□□□□ -0.11
CBWD3-206ENST00000478048 ITGA6P23229 1130 aa14.33□□□□□ -0.12
CBWD3-206ENST00000478048 PIM2Q9P1W9 311 aa14.33□□□□□ -0.12
CBWD3-206ENST00000478048 CRAMP1Q96RY5 1269 aa14.32□□□□□ -0.12
CBWD3-206ENST00000478048 HDAC5Q9UQL6 1122 aa14.32□□□□□ -0.12
CBWD3-206ENST00000478048 UTRNP46939 3433 aa14.32□□□□□ -0.12
CBWD3-206ENST00000478048 RTL9Q8NET4 1388 aa14.32□□□□□ -0.12
CBWD3-206ENST00000478048 PNMA6EA0A0J9YXQ4 647 aa14.32□□□□□ -0.12
CBWD3-206ENST00000478048 GRAPQ13588 217 aa14.32□□□□□ -0.12
CBWD3-206ENST00000478048 PRPF40BQ6NWY9 871 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms