RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 ZMYM1Q5SVZ6 1142 aa8.89□□□□□ -0.99
LMBR1-216ENST00000477983 OR13H1Q8NG92 308 aa8.89□□□□□ -0.99
LMBR1-216ENST00000477983 CCDC97Q96F63 343 aaPredicted RBP8.89□□□□□ -0.99
LMBR1-216ENST00000477983 DLL1O00548 723 aa8.88□□□□□ -0.99
LMBR1-216ENST00000477983 ZAP70P43403 619 aa8.88□□□□□ -0.99
LMBR1-216ENST00000477983 PRSS36Q5K4E3 855 aa8.88□□□□□ -0.99
LMBR1-216ENST00000477983 CACTIN-AS1Q8N1I8 211 aa8.88□□□□□ -0.99
LMBR1-216ENST00000477983 WFDC12Q8WWY7 111 aa8.88□□□□□ -0.99
LMBR1-216ENST00000477983 NSUN5Q96P11 429 aaKnown RBP8.88□□□□□ -0.99
LMBR1-216ENST00000477983 KRTAP9-2Q9BYQ4 174 aa8.88□□□□□ -0.99
LMBR1-216ENST00000477983 FNDC3AQ9Y2H6 1198 aaKnown RBP8.88□□□□□ -0.99
LMBR1-216ENST00000477983 UBAP1LF5GYI3 381 aa8.87□□□□□ -0.99
LMBR1-216ENST00000477983 ZBTB39O15060 712 aa8.87□□□□□ -0.99
LMBR1-216ENST00000477983 FOXD4L6Q3SYB3 417 aaPredicted RBP8.87□□□□□ -0.99
LMBR1-216ENST00000477983 FOXD4L3Q6VB84 417 aaPredicted RBP8.87□□□□□ -0.99
LMBR1-216ENST00000477983 RBSNQ9H1K0 784 aa8.87□□□□□ -0.99
LMBR1-216ENST00000477983 SRA1Q9HD15 236 aaKnown RBP8.87□□□□□ -0.99
LMBR1-216ENST00000477983 ABTB2Q8N961 1025 aa8.86□□□□□ -0.99
LMBR1-216ENST00000477983 TP53INP1Q96A56 240 aa8.86□□□□□ -0.99
LMBR1-216ENST00000477983 GTF3C3Q9Y5Q9 886 aa8.86□□□□□ -0.99
LMBR1-216ENST00000477983 KRTAP9-6A0A140TA67 174 aa8.85□□□□□ -0.99
LMBR1-216ENST00000477983 ATP2B4P23634 1241 aa8.85□□□□□ -0.99
LMBR1-216ENST00000477983 NOS3P29474 1203 aa8.85□□□□□ -0.99
LMBR1-216ENST00000477983 TMEM130Q8N3G9 435 aa8.85□□□□□ -0.99
LMBR1-216ENST00000477983 IL22RA1Q8N6P7 574 aa8.85□□□□□ -0.99
LMBR1-216ENST00000477983 IREB2P48200 963 aaKnown RBP8.84□□□□□ -0.99
LMBR1-216ENST00000477983 GDF6Q6KF10 455 aaPredicted RBP8.84□□□□□ -0.99
LMBR1-216ENST00000477983 MAP4K3Q8IVH8 894 aa8.84□□□□□ -0.99
LMBR1-216ENST00000477983 GPR152Q8TDT2 470 aa8.84□□□□□ -0.99
LMBR1-216ENST00000477983 MUC3BQ9H195 1237 aa8.84□□□□□ -0.99
LMBR1-216ENST00000477983 SETDB1Q15047 1291 aa8.83□□□□□ -1
LMBR1-216ENST00000477983 COL13A1Q5TAT6 717 aaPredicted RBP8.83□□□□□ -1
LMBR1-216ENST00000477983 TTC39BQ5VTQ0 682 aaPredicted RBP8.83□□□□□ -1
LMBR1-216ENST00000477983 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
LMBR1-216ENST00000477983 SEPT3Q9UH03 358 aa8.83□□□□□ -1
LMBR1-216ENST00000477983 KIF4AO95239 1232 aa8.82□□□□□ -1
LMBR1-216ENST00000477983 HYAL2Q12891 473 aa8.82□□□□□ -1
LMBR1-216ENST00000477983 MRPL18Q9H0U6 180 aaKnown RBP8.82□□□□□ -1
LMBR1-216ENST00000477983 TRIM33Q9UPN9 1127 aa8.82□□□□□ -1
LMBR1-216ENST00000477983 ARID3CA6NKF2 412 aa8.81□□□□□ -1
LMBR1-216ENST00000477983 PDE12Q6L8Q7 609 aaKnown RBP8.81□□□□□ -1
LMBR1-216ENST00000477983 DZIP1LQ8IYY4 767 aaKnown RBP8.81□□□□□ -1
LMBR1-216ENST00000477983 MEGF10Q96KG7 1140 aa8.81□□□□□ -1
LMBR1-216ENST00000477983 ABI2Q9NYB9 513 aaPredicted RBP8.81□□□□□ -1
LMBR1-216ENST00000477983 XKR5Q6UX68 686 aa8.8□□□□□ -1
LMBR1-216ENST00000477983 SPACA7Q96KW9 195 aa8.8□□□□□ -1
LMBR1-216ENST00000477983 AKTIPQ9H8T0 292 aa8.8□□□□□ -1
LMBR1-216ENST00000477983 PPME1Q9Y570 386 aa8.8□□□□□ -1
LMBR1-216ENST00000477983 F8W735 103 aaPredicted RBP8.79□□□□□ -1
LMBR1-216ENST00000477983 RPLP1P05386 114 aaKnown RBP8.79□□□□□ -1
LMBR1-216ENST00000477983 ARTNQ5T4W7 220 aa8.79□□□□□ -1
LMBR1-216ENST00000477983 CEP120Q8N960 986 aa8.79□□□□□ -1
LMBR1-216ENST00000477983 HELQQ8TDG4 1101 aa8.79□□□□□ -1
LMBR1-216ENST00000477983 ELP3Q9H9T3 547 aa8.79□□□□□ -1
LMBR1-216ENST00000477983 PPP1R15AO75807 674 aaPredicted RBP8.78□□□□□ -1
LMBR1-216ENST00000477983 SCNN1AP37088 669 aa8.78□□□□□ -1
LMBR1-216ENST00000477983 NUDT16Q96DE0 195 aaKnown RBP8.78□□□□□ -1
LMBR1-216ENST00000477983 TMEM88BA6NKF7 163 aa8.77□□□□□ -1.01
LMBR1-216ENST00000477983 TM4SF5O14894 197 aa8.77□□□□□ -1.01
LMBR1-216ENST00000477983 SMNDC1O75940 238 aaKnown RBP eCLIP8.77□□□□□ -1.01
LMBR1-216ENST00000477983 CYP2E1P05181 493 aaPredicted RBP8.77□□□□□ -1.01
LMBR1-216ENST00000477983 SSFA2P28290 1259 aa8.77□□□□□ -1.01
LMBR1-216ENST00000477983 ATP11AP98196 1134 aa8.77□□□□□ -1.01
LMBR1-216ENST00000477983 CEP135Q66GS9 1140 aa8.77□□□□□ -1.01
LMBR1-216ENST00000477983 Q6ZS46 218 aa8.77□□□□□ -1.01
LMBR1-216ENST00000477983 PBX4Q9BYU1 374 aa8.77□□□□□ -1.01
LMBR1-216ENST00000477983 TMEM63CQ9P1W3 806 aa8.77□□□□□ -1.01
LMBR1-216ENST00000477983 ALX3O95076 343 aa8.76□□□□□ -1.01
LMBR1-216ENST00000477983 CDC27P30260 824 aa8.76□□□□□ -1.01
LMBR1-216ENST00000477983 ADAMTSL4Q6UY14 1074 aa8.76□□□□□ -1.01
LMBR1-216ENST00000477983 PRR23CQ6ZRP0 262 aa8.76□□□□□ -1.01
LMBR1-216ENST00000477983 ATCAYQ86WG3 371 aa8.76□□□□□ -1.01
LMBR1-216ENST00000477983 GALNT11Q8NCW6 608 aa8.76□□□□□ -1.01
LMBR1-216ENST00000477983 RASSF4Q9H2L5 321 aa8.76□□□□□ -1.01
LMBR1-216ENST00000477983 ZFP64Q9NPA5 681 aa8.76□□□□□ -1.01
LMBR1-216ENST00000477983 SALL4Q9UJQ4 1053 aa8.76□□□□□ -1.01
LMBR1-216ENST00000477983 LINC01387J3KSC0 135 aa8.75□□□□□ -1.01
LMBR1-216ENST00000477983 NOM1Q5C9Z4 860 aaKnown RBP8.75□□□□□ -1.01
LMBR1-216ENST00000477983 SLC51AQ86UW1 340 aa8.75□□□□□ -1.01
LMBR1-216ENST00000477983 KRTAP1-3Q8IUG1 177 aa8.75□□□□□ -1.01
LMBR1-216ENST00000477983 ADAM19Q9H013 955 aa8.75□□□□□ -1.01
LMBR1-216ENST00000477983 CNTN3Q9P232 1028 aa8.75□□□□□ -1.01
LMBR1-216ENST00000477983 SCO2A0A1W2PP80 73 aa8.74□□□□□ -1.01
LMBR1-216ENST00000477983 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.74□□□□□ -1.01
LMBR1-216ENST00000477983 ZNF438Q7Z4V0 828 aa8.74□□□□□ -1.01
LMBR1-216ENST00000477983 NCAPG2Q86XI2 1143 aa8.74□□□□□ -1.01
LMBR1-216ENST00000477983 CCDC82Q8N4S0 544 aa8.74□□□□□ -1.01
LMBR1-216ENST00000477983 EDEM1Q92611 657 aa8.74□□□□□ -1.01
LMBR1-216ENST00000477983 LACRTQ9GZZ8 138 aa8.74□□□□□ -1.01
LMBR1-216ENST00000477983 GGNBP2Q9H3C7 697 aa8.74□□□□□ -1.01
LMBR1-216ENST00000477983 PDGFAP04085 211 aa8.73□□□□□ -1.01
LMBR1-216ENST00000477983 NPR3P17342 541 aa8.73□□□□□ -1.01
LMBR1-216ENST00000477983 MZF1P28698 734 aaPredicted RBP8.73□□□□□ -1.01
LMBR1-216ENST00000477983 LRP8Q14114 963 aa8.73□□□□□ -1.01
LMBR1-216ENST00000477983 GTF3C2Q8WUA4 911 aaPredicted RBP8.73□□□□□ -1.01
LMBR1-216ENST00000477983 POP1Q99575 1024 aaKnown RBP8.73□□□□□ -1.01
LMBR1-216ENST00000477983 NFKBIEO00221 500 aa8.72□□□□□ -1.01
LMBR1-216ENST00000477983 PCSK2P16519 638 aa8.72□□□□□ -1.01
LMBR1-216ENST00000477983 CD68P34810 354 aaPredicted RBP8.72□□□□□ -1.01
LMBR1-216ENST00000477983 C1orf127Q8N9H9 656 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms