RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 RFC5P40937 340 aa9.74□□□□□ -0.85
USP33-208ENST00000477949 EVA1CP58658 441 aa9.74□□□□□ -0.85
USP33-208ENST00000477949 RGL3Q3MIN7 710 aa9.74□□□□□ -0.85
USP33-208ENST00000477949 TMEM151AQ8N4L1 468 aa9.74□□□□□ -0.85
USP33-208ENST00000477949 NLGN2Q8NFZ4 835 aa9.74□□□□□ -0.85
USP33-208ENST00000477949 POLR3AO14802 1390 aaPredicted RBP9.74□□□□□ -0.85
USP33-208ENST00000477949 TUBGCP6Q96RT7 1819 aa9.73□□□□□ -0.85
USP33-208ENST00000477949 WASLO00401 505 aaPredicted RBP9.73□□□□□ -0.85
USP33-208ENST00000477949 SLURP2P0DP57 97 aa9.73□□□□□ -0.85
USP33-208ENST00000477949 ZNF827Q17R98 1081 aa9.73□□□□□ -0.85
USP33-208ENST00000477949 NUTM2GQ5VZR2 741 aa9.73□□□□□ -0.85
USP33-208ENST00000477949 ZNF385CQ66K41 422 aaPredicted RBP9.73□□□□□ -0.85
USP33-208ENST00000477949 DNAJC5GQ8N7S2 189 aa9.73□□□□□ -0.85
USP33-208ENST00000477949 KDF1Q8NAX2 398 aaPredicted RBP9.73□□□□□ -0.85
USP33-208ENST00000477949 HIRIP3Q9BW71 556 aaPredicted RBP9.73□□□□□ -0.85
USP33-208ENST00000477949 RASSF7Q02833 373 aa9.72□□□□□ -0.85
USP33-208ENST00000477949 KCTD17Q8N5Z5 321 aa9.72□□□□□ -0.85
USP33-208ENST00000477949 NGDNQ8NEJ9 315 aaKnown RBP9.72□□□□□ -0.85
USP33-208ENST00000477949 ARHGEF28Q8N1W1 1705 aaKnown RBP9.72□□□□□ -0.85
USP33-208ENST00000477949 RNF225M0QZC1 329 aaPredicted RBP9.71□□□□□ -0.86
USP33-208ENST00000477949 GDF11O95390 407 aa9.71□□□□□ -0.86
USP33-208ENST00000477949 DDB1Q16531 1140 aa9.71□□□□□ -0.86
USP33-208ENST00000477949 TMEM259Q4ZIN3 620 aa9.71□□□□□ -0.86
USP33-208ENST00000477949 SVOPQ8N4V2 548 aa9.71□□□□□ -0.86
USP33-208ENST00000477949 FOXD4L5Q5VV16 416 aaPredicted RBP9.7□□□□□ -0.86
USP33-208ENST00000477949 LYSMD3Q7Z3D4 306 aa9.7□□□□□ -0.86
USP33-208ENST00000477949 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
USP33-208ENST00000477949 POGKQ9P215 609 aa9.7□□□□□ -0.86
USP33-208ENST00000477949 SLIT3O75094 1523 aa9.7□□□□□ -0.86
USP33-208ENST00000477949 BTAF1O14981 1849 aa9.7□□□□□ -0.86
USP33-208ENST00000477949 TRPM1Q7Z4N2 1603 aa9.69□□□□□ -0.86
USP33-208ENST00000477949 WHAMMQ8TF30 809 aa9.69□□□□□ -0.86
USP33-208ENST00000477949 TRIM34Q9BYJ4 488 aa9.69□□□□□ -0.86
USP33-208ENST00000477949 LRRC4BQ9NT99 713 aa9.69□□□□□ -0.86
USP33-208ENST00000477949 TNS2Q63HR2 1409 aa9.68□□□□□ -0.86
USP33-208ENST00000477949 ARHGEF15O94989 841 aa9.68□□□□□ -0.86
USP33-208ENST00000477949 GCP02774 474 aa9.68□□□□□ -0.86
USP33-208ENST00000477949 RNF144AP50876 292 aaPredicted RBP9.68□□□□□ -0.86
USP33-208ENST00000477949 PCMTD1Q96MG8 357 aaPredicted RBP9.68□□□□□ -0.86
USP33-208ENST00000477949 PNPLA7Q6ZV29 1317 aa9.67□□□□□ -0.86
USP33-208ENST00000477949 GRIN3BO60391 1043 aa9.67□□□□□ -0.86
USP33-208ENST00000477949 CYLDQ9NQC7 956 aa9.67□□□□□ -0.86
USP33-208ENST00000477949 ABCC6O95255 1503 aa9.66□□□□□ -0.86
USP33-208ENST00000477949 ACEP12821 1306 aa9.66□□□□□ -0.86
USP33-208ENST00000477949 WDR17Q8IZU2 1322 aa9.66□□□□□ -0.86
USP33-208ENST00000477949 WDR90Q96KV7 1748 aa9.66□□□□□ -0.86
USP33-208ENST00000477949 ZBBXA8MT70 800 aa9.66□□□□□ -0.86
USP33-208ENST00000477949 PRICKLE2Q7Z3G6 844 aa9.66□□□□□ -0.86
USP33-208ENST00000477949 NUDT16Q96DE0 195 aaKnown RBP9.66□□□□□ -0.86
USP33-208ENST00000477949 TRAK1Q9UPV9 953 aa9.66□□□□□ -0.86
USP33-208ENST00000477949 MARSP56192 900 aaKnown RBP9.65□□□□□ -0.86
USP33-208ENST00000477949 RGPD5Q99666 1765 aa9.65□□□□□ -0.87
USP33-208ENST00000477949 SRSF11Q05519 484 aaKnown RBP9.64□□□□□ -0.87
USP33-208ENST00000477949 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
USP33-208ENST00000477949 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
USP33-208ENST00000477949 GMCL1Q96IK5 515 aa9.64□□□□□ -0.87
USP33-208ENST00000477949 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
USP33-208ENST00000477949 CUEDC1Q9NWM3 386 aaPredicted RBP9.64□□□□□ -0.87
USP33-208ENST00000477949 PCDHB9Q9Y5E1 797 aa9.64□□□□□ -0.87
USP33-208ENST00000477949 USP6P35125 1406 aa9.64□□□□□ -0.87
USP33-208ENST00000477949 CPSF1Q10570 1443 aaKnown RBP9.64□□□□□ -0.87
USP33-208ENST00000477949 CICQ96RK0 1608 aaPredicted RBP9.64□□□□□ -0.87
USP33-208ENST00000477949 BRD4O60885 1362 aaPredicted RBP9.63□□□□□ -0.87
USP33-208ENST00000477949 LOC100996750A0A140TA64 210 aa9.63□□□□□ -0.87
USP33-208ENST00000477949 ATP5J2-PTCD1G3V325 749 aa9.63□□□□□ -0.87
USP33-208ENST00000477949 POLD1P28340 1107 aa9.63□□□□□ -0.87
USP33-208ENST00000477949 GPC1P35052 558 aa9.63□□□□□ -0.87
USP33-208ENST00000477949 SUZ12Q15022 739 aaKnown RBP9.63□□□□□ -0.87
USP33-208ENST00000477949 TOM1L2Q6ZVM7 507 aa9.63□□□□□ -0.87
USP33-208ENST00000477949 ZNF526Q8TF50 670 aaPredicted RBP9.63□□□□□ -0.87
USP33-208ENST00000477949 KRTAP4-6Q9BYQ5 205 aa9.63□□□□□ -0.87
USP33-208ENST00000477949 PIK3C2AO00443 1686 aa9.63□□□□□ -0.87
USP33-208ENST00000477949 RHOQP17081 205 aa9.62□□□□□ -0.87
USP33-208ENST00000477949 RNF20Q5VTR2 975 aa9.62□□□□□ -0.87
USP33-208ENST00000477949 NLRP13Q86W25 1043 aa9.62□□□□□ -0.87
USP33-208ENST00000477949 CARD10Q9BWT7 1032 aa9.62□□□□□ -0.87
USP33-208ENST00000477949 FBXO45P0C2W1 286 aa9.61□□□□□ -0.87
USP33-208ENST00000477949 IRS1P35568 1242 aa9.61□□□□□ -0.87
USP33-208ENST00000477949 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
USP33-208ENST00000477949 LYPD4Q6UWN0 246 aa9.61□□□□□ -0.87
USP33-208ENST00000477949 SCARF2Q96GP6 870 aaPredicted RBP9.61□□□□□ -0.87
USP33-208ENST00000477949 LY75O60449 1722 aa9.61□□□□□ -0.87
USP33-208ENST00000477949 PPIP5K1Q6PFW1 1433 aa9.6□□□□□ -0.87
USP33-208ENST00000477949 A0A1W2PRU2 124 aa9.6□□□□□ -0.87
USP33-208ENST00000477949 MEN1O00255 615 aa9.6□□□□□ -0.87
USP33-208ENST00000477949 MAP3K10Q02779 954 aa9.6□□□□□ -0.87
USP33-208ENST00000477949 GAS6Q14393 721 aa9.6□□□□□ -0.87
USP33-208ENST00000477949 KANK3Q6NY19 840 aa9.6□□□□□ -0.87
USP33-208ENST00000477949 FOXR1Q6PIV2 292 aa9.6□□□□□ -0.87
USP33-208ENST00000477949 TRIM22Q8IYM9 498 aa9.6□□□□□ -0.87
USP33-208ENST00000477949 ACSBG1Q96GR2 724 aa9.6□□□□□ -0.87
USP33-208ENST00000477949 TNRC18O15417 2968 aaPredicted RBP9.59□□□□□ -0.87
USP33-208ENST00000477949 QRICH2Q9H0J4 1663 aa9.59□□□□□ -0.87
USP33-208ENST00000477949 EXOC5O00471 708 aa9.59□□□□□ -0.87
USP33-208ENST00000477949 ERVK-9P63128 1117 aa9.59□□□□□ -0.87
USP33-208ENST00000477949 CC2D2BQ6DHV5 1058 aa9.59□□□□□ -0.87
USP33-208ENST00000477949 KLRG1Q96E93 195 aa9.59□□□□□ -0.87
USP33-208ENST00000477949 CDK19Q9BWU1 502 aa9.59□□□□□ -0.87
USP33-208ENST00000477949 ENAMQ9NRM1 1142 aa9.59□□□□□ -0.87
USP33-208ENST00000477949 NFAT5O94916 1531 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms