RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 BTBD11A6QL63 1104 aa14.81□□□□□ -0.04
RTFDC1-207ENST00000477573 EIF3CLB5ME19 914 aaKnown RBP14.81□□□□□ -0.04
RTFDC1-207ENST00000477573 NEFHP12036 1026 aa14.81□□□□□ -0.04
RTFDC1-207ENST00000477573 ANKRD23Q86SG2 305 aa14.81□□□□□ -0.04
RTFDC1-207ENST00000477573 EIF3CQ99613 913 aaKnown RBP14.81□□□□□ -0.04
RTFDC1-207ENST00000477573 SPG7Q9UQ90 795 aa14.81□□□□□ -0.04
RTFDC1-207ENST00000477573 EFCAB13Q8IY85 973 aa14.81□□□□□ -0.04
RTFDC1-207ENST00000477573 ZSCAN16Q9H4T2 348 aaPredicted RBP14.81□□□□□ -0.04
RTFDC1-207ENST00000477573 NSFL1CQ9UNZ2 370 aaKnown RBP14.81□□□□□ -0.04
RTFDC1-207ENST00000477573 KDM3BQ7LBC6 1761 aa14.81□□□□□ -0.04
RTFDC1-207ENST00000477573 EIF4A1P60842 406 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 NUCB1Q02818 461 aa14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 FLIIQ13045 1269 aa14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 ELF2Q15723 593 aa14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 HDGFL1Q5TGJ6 251 aa14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 CEP135Q66GS9 1140 aa14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 ELP1O95163 1332 aa14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 ZRANB2O95218 330 aaKnown RBP eCLIP14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 SLU7O95391 586 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 LEKR1Q6ZMV7 388 aa14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 DNAAF4Q8WXU2 420 aa14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 C1orf115Q9H7X2 142 aa14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 A1CFQ9NQ94 594 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 ARGLU1Q9NWB6 273 aaPredicted RBP14.8□□□□□ -0.04
RTFDC1-207ENST00000477573 CCDC171Q6TFL3 1326 aa14.79□□□□□ -0.04
RTFDC1-207ENST00000477573 COQ9O75208 318 aa14.79□□□□□ -0.04
RTFDC1-207ENST00000477573 INHBEP58166 350 aa14.79□□□□□ -0.04
RTFDC1-207ENST00000477573 ST5P78524 1137 aa14.79□□□□□ -0.04
RTFDC1-207ENST00000477573 CHRNA2Q15822 529 aa14.79□□□□□ -0.04
RTFDC1-207ENST00000477573 FMNL3Q8IVF7 1028 aa14.79□□□□□ -0.04
RTFDC1-207ENST00000477573 RPAP2Q8IXW5 612 aaPredicted RBP14.79□□□□□ -0.04
RTFDC1-207ENST00000477573 ERCC4Q92889 916 aaPredicted RBP14.79□□□□□ -0.04
RTFDC1-207ENST00000477573 TEX13AQ9BXU3 409 aaPredicted RBP14.79□□□□□ -0.04
RTFDC1-207ENST00000477573 G2E3Q7L622 706 aa14.78□□□□□ -0.04
RTFDC1-207ENST00000477573 MKRN1Q9UHC7 482 aaKnown RBP14.78□□□□□ -0.04
RTFDC1-207ENST00000477573 SLC4A10Q6U841 1118 aa14.78□□□□□ -0.04
RTFDC1-207ENST00000477573 CHD1LQ86WJ1 897 aa14.78□□□□□ -0.04
RTFDC1-207ENST00000477573 FAXDC2Q96IV6 333 aa14.78□□□□□ -0.04
RTFDC1-207ENST00000477573 PRDM11Q9NQV5 511 aa14.78□□□□□ -0.04
RTFDC1-207ENST00000477573 MIEF2Q96C03 454 aa14.77□□□□□ -0.04
RTFDC1-207ENST00000477573 CLCN6P51797 869 aa14.77□□□□□ -0.05
RTFDC1-207ENST00000477573 IFNL2Q8IZJ0 200 aa14.77□□□□□ -0.05
RTFDC1-207ENST00000477573 NECTIN2Q92692 538 aa14.77□□□□□ -0.05
RTFDC1-207ENST00000477573 FAM107BQ9H098 131 aa14.77□□□□□ -0.05
RTFDC1-207ENST00000477573 ETAA1Q9NY74 926 aa14.77□□□□□ -0.05
RTFDC1-207ENST00000477573 ADAMTS7Q9UKP4 1686 aa14.76□□□□□ -0.05
RTFDC1-207ENST00000477573 TMEM132AQ24JP5 1023 aa14.76□□□□□ -0.05
RTFDC1-207ENST00000477573 REXO1L1PQ8IX06 675 aa14.76□□□□□ -0.05
RTFDC1-207ENST00000477573 ANKRD44Q8N8A2 993 aa14.76□□□□□ -0.05
RTFDC1-207ENST00000477573 POLR3GO15318 223 aaPredicted RBP14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 ADCY2Q08462 1091 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 ANKRD45Q5TZF3 282 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 TMCO3Q6UWJ1 677 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 SIRT2Q8IXJ6 389 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 PXDNLA1KZ92 1463 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 F6X3S4 739 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 HMMRO75330 724 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 GNAI3P08754 354 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 EIF2S2P20042 333 aaKnown RBP14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 BMP2KLQ5H9B9 411 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 CCDC183Q5T5S1 534 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 TATDN2Q93075 761 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 ZDHHC9Q9Y397 364 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 RPS6KL1Q9Y6S9 549 aa14.75□□□□□ -0.05
RTFDC1-207ENST00000477573 A0A087WUV0 522 aaPredicted RBP14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 ANKRD18BA2A2Z9 1011 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 PHKG2P15735 406 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 SETDB1Q15047 1291 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 TPD52L1Q16890 204 aaPredicted RBP14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 FILIP1Q7Z7B0 1213 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 NUTM1Q86Y26 1132 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 MEIS3Q99687 375 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 LNPKQ9C0E8 428 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 NHSL1Q5SYE7 1610 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 WDR17Q8IZU2 1322 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 SIPA1L3O60292 1781 aaPredicted RBP14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 MEGF6O75095 1541 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 AP1ARQ63HQ0 302 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 CCDC186Q7Z3E2 898 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 TADA2BQ86TJ2 420 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 ERC1Q8IUD2 1116 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 GIMAP7Q8NHV1 300 aa14.74□□□□□ -0.05
RTFDC1-207ENST00000477573 GNAI2P04899 355 aa14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 PKP1Q13835 747 aa14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 CCDC96Q2M329 555 aa14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 CEP85Q6P2H3 762 aa14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 DCTPP1Q9H773 170 aa14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 GNL3LQ9NVN8 582 aaKnown RBP14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 ATP10DQ9P241 1426 aa14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 EIF3JO75822 258 aaKnown RBP14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 OAS2P29728 719 aaKnown RBP14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 MNAT1P51948 309 aa14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 DCAF5Q96JK2 942 aa14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 SLC52A2Q9HAB3 445 aa14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 DBF4Q9UBU7 674 aaPredicted RBP14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 SCN11AQ9UI33 1791 aa14.73□□□□□ -0.05
RTFDC1-207ENST00000477573 KCNQ3O43525 872 aa14.72□□□□□ -0.05
RTFDC1-207ENST00000477573 HCLS1P14317 486 aaPredicted RBP14.72□□□□□ -0.05
RTFDC1-207ENST00000477573 TOM1L2Q6ZVM7 507 aa14.72□□□□□ -0.05
RTFDC1-207ENST00000477573 SH3GL3Q99963 347 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms