RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 CNOT7Q9UIV1 285 aaKnown RBP20.04■□□□□ 0.8
CLDN11-204ENST00000477531 PCNTO95613 3336 aa20.04■□□□□ 0.8
CLDN11-204ENST00000477531 DUOX1Q9NRD9 1551 aa20.04■□□□□ 0.8
CLDN11-204ENST00000477531 LTBP1Q14766 1721 aa20.03■□□□□ 0.8
CLDN11-204ENST00000477531 GCKRQ14397 625 aa20.03■□□□□ 0.8
CLDN11-204ENST00000477531 LINS1Q8NG48 757 aa20.03■□□□□ 0.8
CLDN11-204ENST00000477531 CNTNAP1P78357 1384 aa20.03■□□□□ 0.8
CLDN11-204ENST00000477531 XDHP47989 1333 aa20.02■□□□□ 0.8
CLDN11-204ENST00000477531 PSMD14O00487 310 aa20.02■□□□□ 0.8
CLDN11-204ENST00000477531 DPF2Q92785 391 aa20.02■□□□□ 0.8
CLDN11-204ENST00000477531 GPR101Q96P66 508 aaPredicted RBP20.02■□□□□ 0.8
CLDN11-204ENST00000477531 GREM2Q9H772 168 aa20.02■□□□□ 0.8
CLDN11-204ENST00000477531 SPINK5Q9NQ38 1064 aaPredicted RBP20.02■□□□□ 0.8
CLDN11-204ENST00000477531 ABT1Q9ULW3 272 aaKnown RBP20.02■□□□□ 0.8
CLDN11-204ENST00000477531 CACNA1FO60840 1977 aa20.02■□□□□ 0.8
CLDN11-204ENST00000477531 ATP2B4P23634 1241 aa20.01■□□□□ 0.79
CLDN11-204ENST00000477531 RPS12P25398 132 aaKnown RBP20.01■□□□□ 0.79
CLDN11-204ENST00000477531 IGHMBP2P38935 993 aaKnown RBP20.01■□□□□ 0.79
CLDN11-204ENST00000477531 IFFO2Q5TF58 517 aa20.01■□□□□ 0.79
CLDN11-204ENST00000477531 ZC3H15Q8WU90 426 aaKnown RBP20.01■□□□□ 0.79
CLDN11-204ENST00000477531 BSDC1Q9NW68 430 aaPredicted RBP20.01■□□□□ 0.79
CLDN11-204ENST00000477531 RTL9Q8NET4 1388 aa20■□□□□ 0.79
CLDN11-204ENST00000477531 HSPA1AP0DMV8 641 aaKnown RBP20■□□□□ 0.79
CLDN11-204ENST00000477531 HSPA1BP0DMV9 641 aaKnown RBP20■□□□□ 0.79
CLDN11-204ENST00000477531 DEFB115Q30KQ5 88 aa20■□□□□ 0.79
CLDN11-204ENST00000477531 MICALL2Q8IY33 904 aa20■□□□□ 0.79
CLDN11-204ENST00000477531 PLA2G12BQ9BX93 195 aa20■□□□□ 0.79
CLDN11-204ENST00000477531 ZBTB12Q9Y330 459 aaPredicted RBP20■□□□□ 0.79
CLDN11-204ENST00000477531 COL4A1P02462 1669 aa19.99■□□□□ 0.79
CLDN11-204ENST00000477531 MPHOSPH8Q99549 860 aa19.98■□□□□ 0.79
CLDN11-204ENST00000477531 RASSF10A6NK89 507 aa19.97■□□□□ 0.79
CLDN11-204ENST00000477531 F6X3S4 739 aa19.97■□□□□ 0.79
CLDN11-204ENST00000477531 ITGA6P23229 1130 aa19.97■□□□□ 0.79
CLDN11-204ENST00000477531 VEGFBP49765 207 aa19.97■□□□□ 0.79
CLDN11-204ENST00000477531 TRPM4Q8TD43 1214 aa19.97■□□□□ 0.79
CLDN11-204ENST00000477531 KCNQ5Q9NR82 932 aa19.97■□□□□ 0.79
CLDN11-204ENST00000477531 PGAP2Q9UHJ9 254 aa19.97■□□□□ 0.79
CLDN11-204ENST00000477531 MINPP1Q9UNW1 487 aa19.97■□□□□ 0.79
CLDN11-204ENST00000477531 TRAF5O00463 557 aa19.96■□□□□ 0.79
CLDN11-204ENST00000477531 VIL1P09327 827 aaKnown RBP19.96■□□□□ 0.79
CLDN11-204ENST00000477531 CDC37L1Q7L3B6 337 aa19.96■□□□□ 0.79
CLDN11-204ENST00000477531 MYH3P11055 1940 aa19.96■□□□□ 0.79
CLDN11-204ENST00000477531 CSF1RP07333 972 aa19.95■□□□□ 0.78
CLDN11-204ENST00000477531 HIRAP54198 1017 aaPredicted RBP19.95■□□□□ 0.78
CLDN11-204ENST00000477531 CASP7P55210 303 aa19.95■□□□□ 0.78
CLDN11-204ENST00000477531 BEND3Q5T5X7 828 aa19.95■□□□□ 0.78
CLDN11-204ENST00000477531 RBM26Q5T8P6 1007 aaKnown RBP19.95■□□□□ 0.78
CLDN11-204ENST00000477531 PAXIP1Q6ZW49 1069 aaPredicted RBP19.95■□□□□ 0.78
CLDN11-204ENST00000477531 SAMD7Q7Z3H4 446 aa19.95■□□□□ 0.78
CLDN11-204ENST00000477531 PODNQ7Z5L7 613 aa19.95■□□□□ 0.78
CLDN11-204ENST00000477531 AIDAQ96BJ3 306 aa19.95■□□□□ 0.78
CLDN11-204ENST00000477531 ANKRD2Q9GZV1 360 aa19.95■□□□□ 0.78
CLDN11-204ENST00000477531 SHTN1A0MZ66 631 aa19.94■□□□□ 0.78
CLDN11-204ENST00000477531 ANKRD18BA2A2Z9 1011 aa19.94■□□□□ 0.78
CLDN11-204ENST00000477531 E9PSI1 815 aa19.94■□□□□ 0.78
CLDN11-204ENST00000477531 CELF2O95319 508 aaKnown RBP19.94■□□□□ 0.78
CLDN11-204ENST00000477531 CCT4P50991 539 aaKnown RBP19.94■□□□□ 0.78
CLDN11-204ENST00000477531 FMR1Q06787 632 aaKnown RBP eCLIP19.94■□□□□ 0.78
CLDN11-204ENST00000477531 FAM161AQ3B820 660 aa19.94■□□□□ 0.78
CLDN11-204ENST00000477531 TBC1D10BQ4KMP7 808 aaPredicted RBP19.94■□□□□ 0.78
CLDN11-204ENST00000477531 GLIS2Q9BZE0 524 aaPredicted RBP19.94■□□□□ 0.78
CLDN11-204ENST00000477531 LEMD3Q9Y2U8 911 aa19.94■□□□□ 0.78
CLDN11-204ENST00000477531 CHMP3Q9Y3E7 222 aa19.94■□□□□ 0.78
CLDN11-204ENST00000477531 ZNF521Q96K83 1311 aa19.94■□□□□ 0.78
CLDN11-204ENST00000477531 ECE1P42892 770 aa19.93■□□□□ 0.78
CLDN11-204ENST00000477531 RSBN1LQ6PCB5 846 aaPredicted RBP19.93■□□□□ 0.78
CLDN11-204ENST00000477531 SLC4A10Q6U841 1118 aa19.93■□□□□ 0.78
CLDN11-204ENST00000477531 AGBL3Q8NEM8 1001 aa19.93■□□□□ 0.78
CLDN11-204ENST00000477531 C9orf78Q9NZ63 289 aaPredicted RBP19.93■□□□□ 0.78
CLDN11-204ENST00000477531 USP17L3A6NCW0 530 aa19.92■□□□□ 0.78
CLDN11-204ENST00000477531 USP17L4A6NCW7 530 aa19.92■□□□□ 0.78
CLDN11-204ENST00000477531 KCNJ4P48050 445 aa19.92■□□□□ 0.78
CLDN11-204ENST00000477531 IFIT5Q13325 482 aaKnown RBP19.92■□□□□ 0.78
CLDN11-204ENST00000477531 CST9Q5W186 159 aa19.92■□□□□ 0.78
CLDN11-204ENST00000477531 USP17L1Q7RTZ2 530 aa19.92■□□□□ 0.78
CLDN11-204ENST00000477531 DCPSQ96C86 337 aaKnown RBP19.92■□□□□ 0.78
CLDN11-204ENST00000477531 WDR33Q9C0J8 1336 aaKnown RBP19.92■□□□□ 0.78
CLDN11-204ENST00000477531 MED23Q9ULK4 1368 aa19.92■□□□□ 0.78
CLDN11-204ENST00000477531 GRM8O00222 908 aa19.91■□□□□ 0.78
CLDN11-204ENST00000477531 ALDH1L1O75891 902 aa19.91■□□□□ 0.78
CLDN11-204ENST00000477531 COL13A1Q5TAT6 717 aaPredicted RBP19.91■□□□□ 0.78
CLDN11-204ENST00000477531 USP48Q86UV5 1035 aa19.91■□□□□ 0.78
CLDN11-204ENST00000477531 SRCIN1Q9C0H9 1055 aa19.91■□□□□ 0.78
CLDN11-204ENST00000477531 ZNF408Q9H9D4 720 aa19.91■□□□□ 0.78
CLDN11-204ENST00000477531 TLL2Q9Y6L7 1015 aa19.91■□□□□ 0.78
CLDN11-204ENST00000477531 TRPM7Q96QT4 1865 aa19.9■□□□□ 0.78
CLDN11-204ENST00000477531 KIF4BQ2VIQ3 1234 aa19.9■□□□□ 0.78
CLDN11-204ENST00000477531 TAF7LQ5H9L4 462 aa19.9■□□□□ 0.78
CLDN11-204ENST00000477531 KRT26Q7Z3Y9 468 aa19.9■□□□□ 0.78
CLDN11-204ENST00000477531 ZNF804BA4D1E1 1349 aa19.9■□□□□ 0.78
CLDN11-204ENST00000477531 MAP2K1Q02750 393 aaPredicted RBP19.89■□□□□ 0.77
CLDN11-204ENST00000477531 GRM1Q13255 1194 aa19.89■□□□□ 0.77
CLDN11-204ENST00000477531 CCDC57Q2TAC2 916 aa19.89■□□□□ 0.77
CLDN11-204ENST00000477531 FBXW7Q969H0 707 aa19.89■□□□□ 0.77
CLDN11-204ENST00000477531 CAPNS2Q96L46 248 aa19.89■□□□□ 0.77
CLDN11-204ENST00000477531 COA1Q9GZY4 146 aa19.89■□□□□ 0.77
CLDN11-204ENST00000477531 USP17L8P0C7I0 530 aa19.88■□□□□ 0.77
CLDN11-204ENST00000477531 FOXO4P98177 505 aa19.88■□□□□ 0.77
CLDN11-204ENST00000477531 CHRNDQ07001 517 aa19.88■□□□□ 0.77
CLDN11-204ENST00000477531 LMBR1LQ6UX01 489 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms