RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 BTAF1O14981 1849 aa19.65■□□□□ 0.74
TMEM53-208ENST00000476724 A0A0D9SFI3 127 aa19.65■□□□□ 0.74
TMEM53-208ENST00000476724 PHF14O94880 888 aa19.65■□□□□ 0.74
TMEM53-208ENST00000476724 TBC1D2BQ9UPU7 963 aa19.65■□□□□ 0.74
TMEM53-208ENST00000476724 TFCP2Q12800 502 aa19.64■□□□□ 0.74
TMEM53-208ENST00000476724 USP48Q86UV5 1035 aa19.64■□□□□ 0.74
TMEM53-208ENST00000476724 CCDC87Q9NVE4 849 aa19.64■□□□□ 0.74
TMEM53-208ENST00000476724 DBNLQ9UJU6 430 aaKnown RBP19.64■□□□□ 0.74
TMEM53-208ENST00000476724 SYCE3A1L190 88 aa19.64■□□□□ 0.73
TMEM53-208ENST00000476724 CPA1P15085 419 aa19.64■□□□□ 0.73
TMEM53-208ENST00000476724 LMBR1LQ6UX01 489 aa19.64■□□□□ 0.73
TMEM53-208ENST00000476724 DZIP3Q86Y13 1208 aaKnown RBP19.64■□□□□ 0.73
TMEM53-208ENST00000476724 KLHL34Q8N239 644 aa19.64■□□□□ 0.73
TMEM53-208ENST00000476724 TCHHQ07283 1943 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 F13A1P00488 732 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 KCNQ4P56696 695 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 CSPP1Q1MSJ5 1256 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 SMARCC1Q92922 1105 aaPredicted RBP19.63■□□□□ 0.73
TMEM53-208ENST00000476724 TRPC5Q9UL62 973 aaPredicted RBP19.63■□□□□ 0.73
TMEM53-208ENST00000476724 NHSQ6T4R5 1651 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 GPTP24298 496 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 EIF5P55010 431 aaKnown RBP19.63■□□□□ 0.73
TMEM53-208ENST00000476724 KRT32Q14532 448 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 HS1BP3Q53T59 392 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 USPL1Q5W0Q7 1092 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 BLOC1S2Q6QNY1 142 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 CCDC83Q8IWF9 413 aa19.63■□□□□ 0.73
TMEM53-208ENST00000476724 LARGE1O95461 756 aa19.62■□□□□ 0.73
TMEM53-208ENST00000476724 GJB2P29033 226 aa19.62■□□□□ 0.73
TMEM53-208ENST00000476724 TRIM28Q13263 835 aaKnown RBP19.62■□□□□ 0.73
TMEM53-208ENST00000476724 LARP6Q9BRS8 491 aaKnown RBP19.62■□□□□ 0.73
TMEM53-208ENST00000476724 GPR108Q9NPR9 543 aa19.62■□□□□ 0.73
TMEM53-208ENST00000476724 SBF2Q86WG5 1849 aa19.62■□□□□ 0.73
TMEM53-208ENST00000476724 TAF5LO75529 589 aa19.61■□□□□ 0.73
TMEM53-208ENST00000476724 HAUS7Q99871 368 aa19.61■□□□□ 0.73
TMEM53-208ENST00000476724 ZNF831Q5JPB2 1677 aa19.61■□□□□ 0.73
TMEM53-208ENST00000476724 ME3Q16798 604 aa19.61■□□□□ 0.73
TMEM53-208ENST00000476724 FAM89AQ96GI7 184 aa19.61■□□□□ 0.73
TMEM53-208ENST00000476724 CHMP3Q9Y3E7 222 aa19.61■□□□□ 0.73
TMEM53-208ENST00000476724 ONECUT3O60422 494 aaPredicted RBP19.6■□□□□ 0.73
TMEM53-208ENST00000476724 SEPT12Q8IYM1 358 aa19.6■□□□□ 0.73
TMEM53-208ENST00000476724 SYNE4Q8N205 404 aa19.6■□□□□ 0.73
TMEM53-208ENST00000476724 PDLIM2Q96JY6 352 aa19.6■□□□□ 0.73
TMEM53-208ENST00000476724 LETM1O95202 739 aaPredicted RBP19.6■□□□□ 0.73
TMEM53-208ENST00000476724 RPS6KB1P23443 525 aa19.6■□□□□ 0.73
TMEM53-208ENST00000476724 UBE2HP62256 183 aa19.6■□□□□ 0.73
TMEM53-208ENST00000476724 NLRP10Q86W26 655 aa19.6■□□□□ 0.73
TMEM53-208ENST00000476724 LINC00116Q8NCU8 138 aa19.6■□□□□ 0.73
TMEM53-208ENST00000476724 QTRT2Q9H974 415 aaKnown RBP19.6■□□□□ 0.73
TMEM53-208ENST00000476724 DBNDD2Q9BQY9 259 aa19.59■□□□□ 0.73
TMEM53-208ENST00000476724 TSPY26PQ9H489 355 aa19.59■□□□□ 0.73
TMEM53-208ENST00000476724 TPCN1Q9ULQ1 816 aa19.59■□□□□ 0.73
TMEM53-208ENST00000476724 GADD45BO75293 160 aaPredicted RBP19.58■□□□□ 0.73
TMEM53-208ENST00000476724 PCCAP05165 728 aaPredicted RBP19.58■□□□□ 0.73
TMEM53-208ENST00000476724 PDCP20941 246 aa19.58■□□□□ 0.73
TMEM53-208ENST00000476724 IL15P40933 162 aaPredicted RBP19.58■□□□□ 0.73
TMEM53-208ENST00000476724 ZNF589Q86UQ0 364 aaPredicted RBP19.58■□□□□ 0.73
TMEM53-208ENST00000476724 GDPD2Q9HCC8 539 aa19.58■□□□□ 0.73
TMEM53-208ENST00000476724 MTMR6Q9Y217 621 aa19.58■□□□□ 0.73
TMEM53-208ENST00000476724 U3KPZ7 1027 aaPredicted RBP19.58■□□□□ 0.73
TMEM53-208ENST00000476724 ERVV-1B6SEH8 477 aa19.58■□□□□ 0.72
TMEM53-208ENST00000476724 FOXD4L6Q3SYB3 417 aaPredicted RBP19.58■□□□□ 0.72
TMEM53-208ENST00000476724 MCMDC2Q4G0Z9 681 aa19.58■□□□□ 0.72
TMEM53-208ENST00000476724 HSP90AB3PQ58FF7 597 aa19.58■□□□□ 0.72
TMEM53-208ENST00000476724 FOXD4L3Q6VB84 417 aaPredicted RBP19.58■□□□□ 0.72
TMEM53-208ENST00000476724 CNPY2Q9Y2B0 182 aa19.58■□□□□ 0.72
TMEM53-208ENST00000476724 UBN2Q6ZU65 1347 aa19.57■□□□□ 0.72
TMEM53-208ENST00000476724 ZSCAN30Q86W11 494 aa19.57■□□□□ 0.72
TMEM53-208ENST00000476724 ZBTB38Q8NAP3 1195 aaPredicted RBP19.57■□□□□ 0.72
TMEM53-208ENST00000476724 ST3GAL1Q11201 340 aa19.56■□□□□ 0.72
TMEM53-208ENST00000476724 KBTBD3Q8NAB2 608 aa19.56■□□□□ 0.72
TMEM53-208ENST00000476724 CCDC183Q5T5S1 534 aa19.56■□□□□ 0.72
TMEM53-208ENST00000476724 ATG9AQ7Z3C6 839 aa19.56■□□□□ 0.72
TMEM53-208ENST00000476724 EDC3Q96F86 508 aaKnown RBP19.56■□□□□ 0.72
TMEM53-208ENST00000476724 ZNF594Q96JF6 807 aaPredicted RBP19.56■□□□□ 0.72
TMEM53-208ENST00000476724 DNAJC2Q99543 621 aaKnown RBP19.56■□□□□ 0.72
TMEM53-208ENST00000476724 BRWD3Q6RI45 1802 aa19.55■□□□□ 0.72
TMEM53-208ENST00000476724 CIAO1O76071 339 aa19.55■□□□□ 0.72
TMEM53-208ENST00000476724 ZNF34Q8IZ26 560 aa19.55■□□□□ 0.72
TMEM53-208ENST00000476724 FAM184AQ8NB25 1140 aa19.55■□□□□ 0.72
TMEM53-208ENST00000476724 CCDC85AQ96PX6 553 aaPredicted RBP19.55■□□□□ 0.72
TMEM53-208ENST00000476724 SH3TC1Q8TE82 1336 aa19.55■□□□□ 0.72
TMEM53-208ENST00000476724 CAMTA2O94983 1202 aa19.55■□□□□ 0.72
TMEM53-208ENST00000476724 LARP1BQ659C4 914 aaKnown RBP19.55■□□□□ 0.72
TMEM53-208ENST00000476724 SMIM5Q71RC9 77 aa19.55■□□□□ 0.72
TMEM53-208ENST00000476724 EYA2O00167 538 aa19.54■□□□□ 0.72
TMEM53-208ENST00000476724 NECAB1Q8N987 351 aa19.54■□□□□ 0.72
TMEM53-208ENST00000476724 NEK1Q96PY6 1258 aa19.54■□□□□ 0.72
TMEM53-208ENST00000476724 HELLSQ9NRZ9 838 aa19.54■□□□□ 0.72
TMEM53-208ENST00000476724 FBXO3Q9UK99 471 aa19.54■□□□□ 0.72
TMEM53-208ENST00000476724 MYH3P11055 1940 aa19.54■□□□□ 0.72
TMEM53-208ENST00000476724 LY75O60449 1722 aa19.54■□□□□ 0.72
TMEM53-208ENST00000476724 BCORQ6W2J9 1755 aa19.54■□□□□ 0.72
TMEM53-208ENST00000476724 ZNF609O15014 1411 aa19.53■□□□□ 0.72
TMEM53-208ENST00000476724 TOB2Q14106 344 aaPredicted RBP19.53■□□□□ 0.72
TMEM53-208ENST00000476724 UVSSAQ2YD98 709 aa19.53■□□□□ 0.72
TMEM53-208ENST00000476724 PLA2G12BQ9BX93 195 aa19.53■□□□□ 0.72
TMEM53-208ENST00000476724 CDHR2Q9BYE9 1310 aa19.53■□□□□ 0.72
TMEM53-208ENST00000476724 TRMT112Q9UI30 125 aaKnown RBP19.53■□□□□ 0.72
TMEM53-208ENST00000476724 HMGB1P09429 215 aaKnown RBP19.52■□□□□ 0.72
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