RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 CKAP2LQ8IYA6 745 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 KRT222Q8N1A0 295 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 NFATC2IPQ8NCF5 419 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 EDC3Q96F86 508 aaKnown RBP9.9□□□□□ -0.82
VAPB-205ENST00000476395 PDRG1Q9NUG6 133 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 MRVI1Q9Y6F6 885 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 LAMB4A4D0S4 1761 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 TULP2O00295 520 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 CCDC144BQ3MJ40 725 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 KSR2Q6VAB6 950 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 CCDC144CPQ8IYA2 1237 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 NEK11Q8NG66 645 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 TCEANC2Q96MN5 208 aa9.9□□□□□ -0.82
VAPB-205ENST00000476395 ALDH8A1Q9H2A2 487 aaPredicted RBP9.9□□□□□ -0.82
VAPB-205ENST00000476395 DRC7Q8IY82 874 aa9.9□□□□□ -0.83
VAPB-205ENST00000476395 CCDC112Q8NEF3 446 aa9.9□□□□□ -0.83
VAPB-205ENST00000476395 PHF8Q9UPP1 1060 aa9.9□□□□□ -0.83
VAPB-205ENST00000476395 ZNF609O15014 1411 aa9.9□□□□□ -0.83
VAPB-205ENST00000476395 ALDH1L1O75891 902 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 GYS2P54840 703 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 USPL1Q5W0Q7 1092 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 ARHGEF25Q86VW2 580 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 TRMT1Q9NXH9 659 aaKnown RBP9.89□□□□□ -0.83
VAPB-205ENST00000476395 FEZ2Q9UHY8 353 aaPredicted RBP9.89□□□□□ -0.83
VAPB-205ENST00000476395 MST1RQ04912 1400 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 A0A087WWV3 80 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 SMTNL1A8MU46 457 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 CACTINQ8WUQ7 758 aaKnown RBP9.89□□□□□ -0.83
VAPB-205ENST00000476395 DBF4Q9UBU7 674 aaPredicted RBP9.89□□□□□ -0.83
VAPB-205ENST00000476395 UBR2Q8IWV8 1755 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 ABCC6O95255 1503 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 CCDC66A2RUB6 948 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 TPD52L1Q16890 204 aaPredicted RBP9.89□□□□□ -0.83
VAPB-205ENST00000476395 TSGA10IPQ3SY00 556 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 EVI5LQ96CN4 794 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 PGBD1Q96JS3 809 aa9.89□□□□□ -0.83
VAPB-205ENST00000476395 DNAJC2Q99543 621 aaKnown RBP9.89□□□□□ -0.83
VAPB-205ENST00000476395 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.89□□□□□ -0.83
VAPB-205ENST00000476395 ADD1P35611 737 aaKnown RBP9.88□□□□□ -0.83
VAPB-205ENST00000476395 RAD51AP2Q09MP3 1159 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 CCDC8Q9H0W5 538 aaPredicted RBP9.88□□□□□ -0.83
VAPB-205ENST00000476395 SMC3Q9UQE7 1217 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 ELP1O95163 1332 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 KDM4FA0A1W2PPD8 638 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 TRIM66O15016 1216 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 SETQ01105 290 aaPredicted RBP9.88□□□□□ -0.83
VAPB-205ENST00000476395 ZNF530Q6P9A1 599 aaPredicted RBP9.88□□□□□ -0.83
VAPB-205ENST00000476395 AACSQ86V21 672 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 NDUFB9Q9Y6M9 179 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 KIF1AQ12756 1690 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 A0A0G2JLW4 131 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 ZSCAN25Q6NSZ9 544 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 LCMT1Q9UIC8 334 aa9.88□□□□□ -0.83
VAPB-205ENST00000476395 MEGF6O75095 1541 aa9.87□□□□□ -0.83
VAPB-205ENST00000476395 GRM8O00222 908 aa9.87□□□□□ -0.83
VAPB-205ENST00000476395 TAF5LO75529 589 aa9.87□□□□□ -0.83
VAPB-205ENST00000476395 LARP1Q6PKG0 1096 aaKnown RBP9.87□□□□□ -0.83
VAPB-205ENST00000476395 ECM29Q5VYK3 1845 aa9.87□□□□□ -0.83
VAPB-205ENST00000476395 RPS6KB1P23443 525 aa9.87□□□□□ -0.83
VAPB-205ENST00000476395 USP16Q9Y5T5 823 aa9.87□□□□□ -0.83
VAPB-205ENST00000476395 PARP4Q9UKK3 1724 aaKnown RBP9.87□□□□□ -0.83
VAPB-205ENST00000476395 PAPPAQ13219 1627 aa9.87□□□□□ -0.83
VAPB-205ENST00000476395 POLR3GO15318 223 aaPredicted RBP9.86□□□□□ -0.83
VAPB-205ENST00000476395 MYCNP04198 464 aaPredicted RBP9.86□□□□□ -0.83
VAPB-205ENST00000476395 CASP7P55210 303 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 SLFNL1Q499Z3 407 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 STOX1Q6ZVD7 989 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 CLASRPQ8N2M8 674 aaKnown RBP9.86□□□□□ -0.83
VAPB-205ENST00000476395 SH2B1Q9NRF2 756 aaPredicted RBP9.86□□□□□ -0.83
VAPB-205ENST00000476395 CYP46A1Q9Y6A2 500 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 SHANK3Q9BYB0 1731 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 CEP135Q66GS9 1140 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 FERMT3Q86UX7 667 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 LINS1Q8NG48 757 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 DBNLQ9UJU6 430 aaKnown RBP9.86□□□□□ -0.83
VAPB-205ENST00000476395 NEURL1BA8MQ27 555 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 JAK2O60674 1132 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 ORAI2Q96SN7 254 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 STRCP1A6NGW2 1772 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 PALLDQ8WX93 1383 aa9.86□□□□□ -0.83
VAPB-205ENST00000476395 CTDNEP1O95476 244 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 GCP02774 474 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 RESTQ13127 1097 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 HSP90AB4PQ58FF6 505 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 PLA2G4DQ86XP0 818 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 ZSCAN31Q96LW9 406 aaPredicted RBP9.85□□□□□ -0.83
VAPB-205ENST00000476395 SEC62Q99442 399 aaKnown RBP9.85□□□□□ -0.83
VAPB-205ENST00000476395 TRIM5Q9C035 493 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 ZCCHC17Q9NP64 241 aaKnown RBP9.85□□□□□ -0.83
VAPB-205ENST00000476395 C4AP0C0L4 1744 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 C4BP0C0L5 1744 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 NEDD4P46934 1319 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 ST5P78524 1137 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 ERCC6LQ2NKX8 1250 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 ILDR1Q86SU0 546 aaPredicted RBP9.85□□□□□ -0.83
VAPB-205ENST00000476395 ZNF397Q8NF99 534 aaPredicted RBP9.85□□□□□ -0.83
VAPB-205ENST00000476395 BOLA2Q9H3K6 86 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 TMEM94Q12767 1356 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 NR1I2O75469 434 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 PTPN12Q05209 780 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms