RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
GGA1-218ENST00000475445 CCDC191Q8NCU4 936 aa17.07■□□□□ 0.32
GGA1-218ENST00000475445 EDC3Q96F86 508 aaKnown RBP17.07■□□□□ 0.32
GGA1-218ENST00000475445 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
GGA1-218ENST00000475445 ZNF609O15014 1411 aa17.07■□□□□ 0.32
GGA1-218ENST00000475445 ZSCAN20P17040 1043 aaPredicted RBP17.06■□□□□ 0.32
GGA1-218ENST00000475445 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
GGA1-218ENST00000475445 IL2RBP14784 551 aa17.06■□□□□ 0.32
GGA1-218ENST00000475445 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
GGA1-218ENST00000475445 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
GGA1-218ENST00000475445 MSNP26038 577 aaKnown RBP17.05■□□□□ 0.32
GGA1-218ENST00000475445 IL15P40933 162 aaPredicted RBP17.05■□□□□ 0.32
GGA1-218ENST00000475445 MCMDC2Q4G0Z9 681 aa17.05■□□□□ 0.32
GGA1-218ENST00000475445 TTLL7Q6ZT98 887 aa17.05■□□□□ 0.32
GGA1-218ENST00000475445 NECAB1Q8N987 351 aa17.05■□□□□ 0.32
GGA1-218ENST00000475445 KBTBD3Q8NAB2 608 aa17.05■□□□□ 0.32
GGA1-218ENST00000475445 DDX54Q8TDD1 881 aaKnown RBP17.05■□□□□ 0.32
GGA1-218ENST00000475445 GTPBP4Q9BZE4 634 aaKnown RBP17.05■□□□□ 0.32
GGA1-218ENST00000475445 PRDM10Q9NQV6 1147 aa17.05■□□□□ 0.32
GGA1-218ENST00000475445 TOB2Q14106 344 aaPredicted RBP17.05■□□□□ 0.32
GGA1-218ENST00000475445 UVSSAQ2YD98 709 aa17.05■□□□□ 0.32
GGA1-218ENST00000475445 DNAJC2Q99543 621 aaKnown RBP17.05■□□□□ 0.32
GGA1-218ENST00000475445 ATG3Q9NT62 314 aa17.05■□□□□ 0.32
GGA1-218ENST00000475445 FIBPO43427 364 aa17.04■□□□□ 0.32
GGA1-218ENST00000475445 LARP1BQ659C4 914 aaKnown RBP17.04■□□□□ 0.32
GGA1-218ENST00000475445 ATG9AQ7Z3C6 839 aa17.04■□□□□ 0.32
GGA1-218ENST00000475445 VPS37CA5D8V6 355 aaPredicted RBP17.04■□□□□ 0.32
GGA1-218ENST00000475445 NOL7Q9UMY1 257 aaKnown RBP17.04■□□□□ 0.32
GGA1-218ENST00000475445 CHMP3Q9Y3E7 222 aa17.04■□□□□ 0.32
GGA1-218ENST00000475445 TOGARAM1Q9Y4F4 1720 aa17.03■□□□□ 0.32
GGA1-218ENST00000475445 CIAO1O76071 339 aa17.03■□□□□ 0.32
GGA1-218ENST00000475445 TAF3Q5VWG9 929 aa17.03■□□□□ 0.32
GGA1-218ENST00000475445 DNM1Q05193 864 aaKnown RBP17.03■□□□□ 0.32
GGA1-218ENST00000475445 DHX37Q8IY37 1157 aaKnown RBP17.03■□□□□ 0.32
GGA1-218ENST00000475445 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
GGA1-218ENST00000475445 TAF6LQ9Y6J9 622 aa17.03■□□□□ 0.32
GGA1-218ENST00000475445 A1BGP04217 495 aa17.02■□□□□ 0.32
GGA1-218ENST00000475445 RNF214Q8ND24 703 aa17.02■□□□□ 0.32
GGA1-218ENST00000475445 HELLSQ9NRZ9 838 aa17.02■□□□□ 0.32
GGA1-218ENST00000475445 CCDC39Q9UFE4 941 aa17.02■□□□□ 0.32
GGA1-218ENST00000475445 LAMA4Q16363 1823 aa17.02■□□□□ 0.32
GGA1-218ENST00000475445 EYA2O00167 538 aa17.02■□□□□ 0.32
GGA1-218ENST00000475445 MCM5P33992 734 aa17.02■□□□□ 0.32
GGA1-218ENST00000475445 VGLL3A8MV65 326 aa17.01■□□□□ 0.31
GGA1-218ENST00000475445 ELP1O95163 1332 aa17.01■□□□□ 0.31
GGA1-218ENST00000475445 KRT85P78386 507 aa17.01■□□□□ 0.31
GGA1-218ENST00000475445 COL9A3Q14050 684 aaPredicted RBP17.01■□□□□ 0.31
GGA1-218ENST00000475445 DDX46Q7L014 1031 aaKnown RBP17.01■□□□□ 0.31
GGA1-218ENST00000475445 PAG1Q9NWQ8 432 aa17.01■□□□□ 0.31
GGA1-218ENST00000475445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
GGA1-218ENST00000475445 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
GGA1-218ENST00000475445 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
GGA1-218ENST00000475445 HMGB1P09429 215 aaKnown RBP17■□□□□ 0.31
GGA1-218ENST00000475445 NEUROD6Q96NK8 337 aa17■□□□□ 0.31
GGA1-218ENST00000475445 ISCA1Q9BUE6 129 aa17■□□□□ 0.31
GGA1-218ENST00000475445 DSCC1Q9BVC3 393 aa17■□□□□ 0.31
GGA1-218ENST00000475445 FBXO3Q9UK99 471 aa17■□□□□ 0.31
GGA1-218ENST00000475445 NDUFB9Q9Y6M9 179 aa17■□□□□ 0.31
GGA1-218ENST00000475445 CCDC129Q6ZRS4 1044 aa17■□□□□ 0.31
GGA1-218ENST00000475445 GTF3C6Q969F1 213 aa17■□□□□ 0.31
GGA1-218ENST00000475445 ZNF500O60304 480 aaPredicted RBP16.99■□□□□ 0.31
GGA1-218ENST00000475445 CYP21A2P08686 494 aa16.99■□□□□ 0.31
GGA1-218ENST00000475445 CDC37L1Q7L3B6 337 aa16.99■□□□□ 0.31
GGA1-218ENST00000475445 SECISBP2LQ93073 1101 aaKnown RBP16.99■□□□□ 0.31
GGA1-218ENST00000475445 SEC62Q99442 399 aaKnown RBP16.99■□□□□ 0.31
GGA1-218ENST00000475445 ZKSCAN5Q9Y2L8 839 aa16.99■□□□□ 0.31
GGA1-218ENST00000475445 ZMYM1Q5SVZ6 1142 aa16.99■□□□□ 0.31
GGA1-218ENST00000475445 CCDC94Q9BW85 323 aaPredicted RBP16.99■□□□□ 0.31
GGA1-218ENST00000475445 TEX13AQ9BXU3 409 aaPredicted RBP16.99■□□□□ 0.31
GGA1-218ENST00000475445 TRIM28Q13263 835 aaKnown RBP16.98■□□□□ 0.31
GGA1-218ENST00000475445 GOLIM4O00461 696 aa16.98■□□□□ 0.31
GGA1-218ENST00000475445 TCIRG1Q13488 830 aa16.98■□□□□ 0.31
GGA1-218ENST00000475445 Q6ZUG5 572 aa16.97■□□□□ 0.31
GGA1-218ENST00000475445 FUCA2Q9BTY2 467 aa16.97■□□□□ 0.31
GGA1-218ENST00000475445 SCAND2PQ9GZW5 306 aaPredicted RBP16.97■□□□□ 0.31
GGA1-218ENST00000475445 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
GGA1-218ENST00000475445 IFIT1P09914 478 aaKnown RBP16.97■□□□□ 0.31
GGA1-218ENST00000475445 TIMM10P62072 90 aa16.97■□□□□ 0.31
GGA1-218ENST00000475445 LRRC24Q50LG9 513 aa16.97■□□□□ 0.31
GGA1-218ENST00000475445 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.97■□□□□ 0.31
GGA1-218ENST00000475445 A0A1B0GUL7 405 aa16.96■□□□□ 0.31
GGA1-218ENST00000475445 DYNC1I1O14576 645 aa16.96■□□□□ 0.31
GGA1-218ENST00000475445 EVA1CP58658 441 aa16.96■□□□□ 0.31
GGA1-218ENST00000475445 LRRFIP1Q32MZ4 808 aaKnown RBP16.96■□□□□ 0.31
GGA1-218ENST00000475445 TTC6Q86TZ1 520 aa16.96■□□□□ 0.31
GGA1-218ENST00000475445 LLPHQ9BRT6 129 aaKnown RBP16.96■□□□□ 0.31
GGA1-218ENST00000475445 STRN4Q9NRL3 753 aa16.96■□□□□ 0.31
GGA1-218ENST00000475445 COL22A1Q8NFW1 1626 aaPredicted RBP16.96■□□□□ 0.31
GGA1-218ENST00000475445 STK3Q13188 491 aa16.96■□□□□ 0.3
GGA1-218ENST00000475445 PLA2G12BQ9BX93 195 aa16.96■□□□□ 0.3
GGA1-218ENST00000475445 CEP126Q9P2H0 1117 aa16.96■□□□□ 0.3
GGA1-218ENST00000475445 RNF113AO15541 343 aaKnown RBP16.95■□□□□ 0.3
GGA1-218ENST00000475445 CHGBP05060 677 aa16.95■□□□□ 0.3
GGA1-218ENST00000475445 DHX32Q7L7V1 743 aaKnown RBP16.95■□□□□ 0.3
GGA1-218ENST00000475445 AKAP2Q9Y2D5 859 aa16.95■□□□□ 0.3
GGA1-218ENST00000475445 ITGB4P16144 1822 aa16.95■□□□□ 0.3
GGA1-218ENST00000475445 MYH15Q9Y2K3 1946 aa16.95■□□□□ 0.3
GGA1-218ENST00000475445 DTNBO60941 627 aa16.95■□□□□ 0.3
GGA1-218ENST00000475445 PCCAP05165 728 aaPredicted RBP16.95■□□□□ 0.3
GGA1-218ENST00000475445 HSP90B1P14625 803 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms