RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 TLR7Q9NYK1 1049 aaKnown RBP12.41□□□□□ -0.42
PCCB-213ENST00000475214 YBX3P16989 372 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCCB-213ENST00000475214 RFC4P35249 363 aa12.4□□□□□ -0.42
PCCB-213ENST00000475214 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.42
PCCB-213ENST00000475214 USPL1Q5W0Q7 1092 aa12.4□□□□□ -0.42
PCCB-213ENST00000475214 LDHAL6AQ6ZMR3 332 aa12.4□□□□□ -0.42
PCCB-213ENST00000475214 RUFY2Q8WXA3 655 aa12.4□□□□□ -0.42
PCCB-213ENST00000475214 PUS3Q9BZE2 481 aaKnown RBP12.4□□□□□ -0.42
PCCB-213ENST00000475214 NYXQ9GZU5 481 aa12.4□□□□□ -0.42
PCCB-213ENST00000475214 BOLA2Q9H3K6 86 aa12.4□□□□□ -0.42
PCCB-213ENST00000475214 CNNM1Q9NRU3 951 aa12.4□□□□□ -0.42
PCCB-213ENST00000475214 DBNLQ9UJU6 430 aaKnown RBP12.4□□□□□ -0.42
PCCB-213ENST00000475214 SCN7AQ01118 1682 aa12.4□□□□□ -0.42
PCCB-213ENST00000475214 EPB41L2O43491 1005 aaKnown RBP12.39□□□□□ -0.43
PCCB-213ENST00000475214 HCLS1P14317 486 aaPredicted RBP12.39□□□□□ -0.43
PCCB-213ENST00000475214 MCCP23508 829 aa12.39□□□□□ -0.43
PCCB-213ENST00000475214 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
PCCB-213ENST00000475214 METTL24Q5JXM2 366 aa12.39□□□□□ -0.43
PCCB-213ENST00000475214 ARHGEF1Q92888 912 aaKnown RBP12.39□□□□□ -0.43
PCCB-213ENST00000475214 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
PCCB-213ENST00000475214 DBNDD2Q9BQY9 259 aa12.39□□□□□ -0.43
PCCB-213ENST00000475214 DIAPH3Q9NSV4 1193 aa12.39□□□□□ -0.43
PCCB-213ENST00000475214 UTRNP46939 3433 aa12.39□□□□□ -0.43
PCCB-213ENST00000475214 LAMB2P55268 1798 aa12.38□□□□□ -0.43
PCCB-213ENST00000475214 ZNF609O15014 1411 aa12.38□□□□□ -0.43
PCCB-213ENST00000475214 A0A1B0GUL7 405 aa12.38□□□□□ -0.43
PCCB-213ENST00000475214 TIMM10P62072 90 aa12.38□□□□□ -0.43
PCCB-213ENST00000475214 TBC1D9BQ66K14 1250 aa12.38□□□□□ -0.43
PCCB-213ENST00000475214 BICDL1Q6ZP65 573 aa12.38□□□□□ -0.43
PCCB-213ENST00000475214 NLGN1Q8N2Q7 840 aa12.38□□□□□ -0.43
PCCB-213ENST00000475214 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
PCCB-213ENST00000475214 RIPOR2Q9Y4F9 1068 aa12.38□□□□□ -0.43
PCCB-213ENST00000475214 DDX60Q8IY21 1712 aaKnown RBP12.37□□□□□ -0.43
PCCB-213ENST00000475214 CCDC158Q5M9N0 1113 aa12.37□□□□□ -0.43
PCCB-213ENST00000475214 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
PCCB-213ENST00000475214 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
PCCB-213ENST00000475214 MPHOSPH8Q99549 860 aa12.37□□□□□ -0.43
PCCB-213ENST00000475214 FSD1Q9BTV5 496 aa12.37□□□□□ -0.43
PCCB-213ENST00000475214 ANO2Q9NQ90 1003 aa12.37□□□□□ -0.43
PCCB-213ENST00000475214 SRP68Q9UHB9 627 aaKnown RBP12.37□□□□□ -0.43
PCCB-213ENST00000475214 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
PCCB-213ENST00000475214 UBR3Q6ZT12 1888 aa12.37□□□□□ -0.43
PCCB-213ENST00000475214 MROH5Q6ZUA9 1318 aa12.37□□□□□ -0.43
PCCB-213ENST00000475214 SGSM2O43147 1006 aa12.36□□□□□ -0.43
PCCB-213ENST00000475214 IGHMBP2P38935 993 aaKnown RBP12.36□□□□□ -0.43
PCCB-213ENST00000475214 SLC4A3P48751 1232 aa12.36□□□□□ -0.43
PCCB-213ENST00000475214 RABEP1Q15276 862 aa12.36□□□□□ -0.43
PCCB-213ENST00000475214 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
PCCB-213ENST00000475214 SLC10A5Q5PT55 438 aa12.36□□□□□ -0.43
PCCB-213ENST00000475214 TPTE2Q6XPS3 522 aa12.36□□□□□ -0.43
PCCB-213ENST00000475214 SMIM5Q71RC9 77 aa12.36□□□□□ -0.43
PCCB-213ENST00000475214 NBPF5PQ86XG9 351 aaPredicted RBP12.36□□□□□ -0.43
PCCB-213ENST00000475214 HSCBQ8IWL3 235 aa12.36□□□□□ -0.43
PCCB-213ENST00000475214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
PCCB-213ENST00000475214 CDC5LQ99459 802 aaKnown RBP12.36□□□□□ -0.43
PCCB-213ENST00000475214 HAUS7Q99871 368 aa12.36□□□□□ -0.43
PCCB-213ENST00000475214 IFIT1P09914 478 aaKnown RBP12.35□□□□□ -0.43
PCCB-213ENST00000475214 SF3B3Q15393 1217 aaKnown RBP12.35□□□□□ -0.43
PCCB-213ENST00000475214 ATP2B3Q16720 1220 aa12.35□□□□□ -0.43
PCCB-213ENST00000475214 TTC39AQ5SRH9 613 aa12.35□□□□□ -0.43
PCCB-213ENST00000475214 CWC27Q6UX04 472 aaKnown RBP12.35□□□□□ -0.43
PCCB-213ENST00000475214 TICAM2Q86XR7 235 aa12.35□□□□□ -0.43
PCCB-213ENST00000475214 SNX21Q969T3 373 aa12.35□□□□□ -0.43
PCCB-213ENST00000475214 XAGE2Q96GT9 111 aa12.35□□□□□ -0.43
PCCB-213ENST00000475214 DNAJC2Q99543 621 aaKnown RBP12.35□□□□□ -0.43
PCCB-213ENST00000475214 KIF2CQ99661 725 aa12.35□□□□□ -0.43
PCCB-213ENST00000475214 TBC1D2Q9BYX2 928 aa12.35□□□□□ -0.43
PCCB-213ENST00000475214 C4AP0C0L4 1744 aa12.34□□□□□ -0.43
PCCB-213ENST00000475214 RFX7Q2KHR2 1363 aa12.34□□□□□ -0.43
PCCB-213ENST00000475214 NPHP1O15259 732 aa12.34□□□□□ -0.43
PCCB-213ENST00000475214 PDE8BO95263 885 aa12.34□□□□□ -0.43
PCCB-213ENST00000475214 AMIGO3Q86WK7 504 aa12.34□□□□□ -0.43
PCCB-213ENST00000475214 NLRP3Q96P20 1036 aa12.34□□□□□ -0.43
PCCB-213ENST00000475214 SEC31BQ9NQW1 1179 aa12.34□□□□□ -0.43
PCCB-213ENST00000475214 RIC1Q4ADV7 1423 aa12.34□□□□□ -0.43
PCCB-213ENST00000475214 RAD50Q92878 1312 aa12.34□□□□□ -0.43
PCCB-213ENST00000475214 ABCC12Q96J65 1359 aa12.33□□□□□ -0.44
PCCB-213ENST00000475214 MMP10P09238 476 aa12.33□□□□□ -0.44
PCCB-213ENST00000475214 ANAPC15P60006 121 aa12.33□□□□□ -0.44
PCCB-213ENST00000475214 TGFB2P61812 414 aa12.33□□□□□ -0.44
PCCB-213ENST00000475214 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
PCCB-213ENST00000475214 GOLGB1Q14789 3259 aaKnown RBP12.33□□□□□ -0.44
PCCB-213ENST00000475214 CARMIL3Q8ND23 1372 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 SLC5A1P13866 664 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 ADORA1P30542 326 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 NMIQ13287 307 aaPredicted RBP12.32□□□□□ -0.44
PCCB-213ENST00000475214 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
PCCB-213ENST00000475214 LRRFIP1Q32MZ4 808 aaKnown RBP12.32□□□□□ -0.44
PCCB-213ENST00000475214 ANKRD18AQ8IVF6 992 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 VGLL2Q8N8G2 317 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 KBTBD3Q8NAB2 608 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 LPIN2Q92539 896 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 PAG1Q9NWQ8 432 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 PARP3Q9Y6F1 533 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 SPEF2Q9C093 1822 aa12.32□□□□□ -0.44
PCCB-213ENST00000475214 GOLIM4O00461 696 aa12.31□□□□□ -0.44
PCCB-213ENST00000475214 ST18O60284 1047 aa12.31□□□□□ -0.44
PCCB-213ENST00000475214 EDC3Q96F86 508 aaKnown RBP12.31□□□□□ -0.44
PCCB-213ENST00000475214 ZNF512BQ96KM6 892 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms