RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 LMOD1P29536 600 aaPredicted RBP11.13□□□□□ -0.63
CDH23-211ENST00000475158 AK7Q96M32 723 aa11.13□□□□□ -0.63
CDH23-211ENST00000475158 ATP10AO60312 1499 aa11.13□□□□□ -0.63
CDH23-211ENST00000475158 ZBTB43O43298 467 aa11.13□□□□□ -0.63
CDH23-211ENST00000475158 IL2RBP14784 551 aa11.13□□□□□ -0.63
CDH23-211ENST00000475158 RDXP35241 583 aaKnown RBP11.13□□□□□ -0.63
CDH23-211ENST00000475158 CRACR2BQ8N4Y2 399 aaPredicted RBP11.13□□□□□ -0.63
CDH23-211ENST00000475158 PRIMPOLQ96LW4 560 aa11.13□□□□□ -0.63
CDH23-211ENST00000475158 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDH23-211ENST00000475158 SLC4A4Q9Y6R1 1079 aa11.13□□□□□ -0.63
CDH23-211ENST00000475158 V9GYY5 206 aaPredicted RBP11.13□□□□□ -0.63
CDH23-211ENST00000475158 EDC4Q6P2E9 1401 aaKnown RBP11.13□□□□□ -0.63
CDH23-211ENST00000475158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDH23-211ENST00000475158 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
CDH23-211ENST00000475158 NBPF5PQ86XG9 351 aaPredicted RBP11.13□□□□□ -0.63
CDH23-211ENST00000475158 DZIP3Q86Y13 1208 aaKnown RBP11.13□□□□□ -0.63
CDH23-211ENST00000475158 CCDC194A0A1B0GVG4 234 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 CATIPQ7Z7H3 387 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 LUZP1Q86V48 1076 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 UBA5Q9GZZ9 404 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 RBSNQ9H1K0 784 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 A0A1B0GUL7 405 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 IRS4O14654 1257 aaPredicted RBP11.12□□□□□ -0.63
CDH23-211ENST00000475158 CD2BP2O95400 341 aaKnown RBP11.12□□□□□ -0.63
CDH23-211ENST00000475158 DCAF5Q96JK2 942 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 PLEKHF1Q96S99 279 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 CDC5LQ99459 802 aaKnown RBP11.12□□□□□ -0.63
CDH23-211ENST00000475158 SEPT11Q9NVA2 429 aaKnown RBP11.12□□□□□ -0.63
CDH23-211ENST00000475158 U2AF2P26368 475 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDH23-211ENST00000475158 ZNF76P36508 570 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 NOLC1Q14978 699 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDH23-211ENST00000475158 ERCC4Q92889 916 aaPredicted RBP11.12□□□□□ -0.63
CDH23-211ENST00000475158 CENPHQ9H3R5 247 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 BTG4Q9NY30 223 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 METP08581 1390 aa11.12□□□□□ -0.63
CDH23-211ENST00000475158 PTPDC1A2A3K4 754 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 GADD45BO75293 160 aaPredicted RBP11.11□□□□□ -0.63
CDH23-211ENST00000475158 WTAPQ15007 396 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 SNX14Q9Y5W7 946 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 ZNF521Q96K83 1311 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 PLA2R1Q13018 1463 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 TTC41PQ6P2S7 1318 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 SYKP43405 635 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 TEX13AQ9BXU3 409 aaPredicted RBP11.11□□□□□ -0.63
CDH23-211ENST00000475158 RNF41Q9H4P4 317 aaPredicted RBP11.11□□□□□ -0.63
CDH23-211ENST00000475158 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
CDH23-211ENST00000475158 PRAMEF22A3QJZ6 481 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 SGSM2O43147 1006 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 EIF4A1P60842 406 aaKnown RBP11.11□□□□□ -0.63
CDH23-211ENST00000475158 ODF2Q5BJF6 829 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 UNC5CLQ8IV45 518 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 C17orf53Q8N3J3 647 aaPredicted RBP11.11□□□□□ -0.63
CDH23-211ENST00000475158 AOPEPQ8N6M6 819 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 RPGRQ92834 1020 aaKnown RBP11.11□□□□□ -0.63
CDH23-211ENST00000475158 C8orf37Q96NL8 207 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 SEC63Q9UGP8 760 aaKnown RBP11.11□□□□□ -0.63
CDH23-211ENST00000475158 ERVK-7P63135 1459 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 SBNO1A3KN83 1393 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 DDB1Q16531 1140 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 STX1AQ16623 288 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 KIF18AQ8NI77 898 aa11.11□□□□□ -0.63
CDH23-211ENST00000475158 SEC62Q99442 399 aaKnown RBP11.11□□□□□ -0.63
CDH23-211ENST00000475158 A0A1B0GVL5 298 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 PROSER3Q2NL68 480 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 KIAA1328Q86T90 577 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 TRMT2AQ8IZ69 625 aaKnown RBP11.1□□□□□ -0.63
CDH23-211ENST00000475158 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
CDH23-211ENST00000475158 CEP131Q9UPN4 1083 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 PRDM1O75626 825 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 TYRO3Q06418 890 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 TTF1Q15361 905 aaPredicted RBP11.1□□□□□ -0.63
CDH23-211ENST00000475158 TMEM132AQ24JP5 1023 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 KIF4BQ2VIQ3 1234 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 CCDC102BQ68D86 513 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 DNAJC10Q8IXB1 793 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 MAGEB6Q8N7X4 407 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 TARBP1Q13395 1621 aaKnown RBP11.1□□□□□ -0.63
CDH23-211ENST00000475158 JAK2O60674 1132 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 TAF5LO75529 589 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 CCDC181Q5TID7 509 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 FAM200AQ8TCP9 573 aa11.1□□□□□ -0.63
CDH23-211ENST00000475158 CCP110O43303 1012 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 ANKRD18AQ8IVF6 992 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 C10orf67Q8IYJ2 551 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 MYL10Q9BUA6 226 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 RFC4P35249 363 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 CCDC152Q4G0S7 254 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 TNNI3KQ59H18 835 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 DHX32Q7L7V1 743 aaKnown RBP11.09□□□□□ -0.63
CDH23-211ENST00000475158 KRT222Q8N1A0 295 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 EAF2Q96CJ1 260 aaPredicted RBP11.09□□□□□ -0.63
CDH23-211ENST00000475158 ZSCAN16Q9H4T2 348 aaPredicted RBP11.09□□□□□ -0.63
CDH23-211ENST00000475158 FPGT-TNNI3KV9GXZ4 949 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 RTL1A6NKG5 1358 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 CTAGE5O15320 804 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 RNF113AO15541 343 aaKnown RBP11.09□□□□□ -0.63
CDH23-211ENST00000475158 UBA7P41226 1012 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 STX17P56962 302 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms