RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CCNHP51946 323 aaPredicted RBP5.78□□□□□ -1.48
NPHP3-206ENST00000474871 SYNE3Q6ZMZ3 975 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 TSC1Q92574 1164 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 MLH3Q9UHC1 1453 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 CCDC66A2RUB6 948 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 PRSS47A8MTI9 375 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 HSP90AB1P08238 724 aaKnown RBP5.78□□□□□ -1.48
NPHP3-206ENST00000474871 EIF4G2P78344 907 aaKnown RBP eCLIP5.78□□□□□ -1.48
NPHP3-206ENST00000474871 GOLGA2Q08379 1002 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 SLC10A5Q5PT55 438 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 GABPB2Q8TAK5 448 aaPredicted RBP5.78□□□□□ -1.48
NPHP3-206ENST00000474871 TBC1D20Q96BZ9 403 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 CASS4Q9NQ75 786 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 PPRC1Q5VV67 1664 aaKnown RBP5.77□□□□□ -1.49
NPHP3-206ENST00000474871 ZMYND10O75800 440 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 LDHCP07864 332 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 LAPTM5Q13571 262 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 AGAP9Q5VTM2 703 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 TOMM22Q9NS69 142 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 COMMD8Q9NX08 183 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 QPCTLQ9NXS2 382 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 RTEL1Q9NZ71 1219 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 CLTCL1P53675 1640 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 H0YHG0 523 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 CPP00450 1065 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 U2AF2P26368 475 aaKnown RBP eCLIP5.77□□□□□ -1.49
NPHP3-206ENST00000474871 RAB27AP51159 221 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 SARNPP82979 210 aaKnown RBP5.77□□□□□ -1.49
NPHP3-206ENST00000474871 ICA1Q05084 483 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 RABL6Q3YEC7 729 aaPredicted RBP5.77□□□□□ -1.49
NPHP3-206ENST00000474871 GAS2L3Q86XJ1 694 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 APPL2Q8NEU8 664 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 OGFRQ9NZT2 677 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 CTNNA3Q9UI47 895 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 LMTK2Q8IWU2 1503 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 LAMC1P11047 1609 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 EFCAB6Q5THR3 1501 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 HMGN5P82970 282 aaKnown RBP5.77□□□□□ -1.49
NPHP3-206ENST00000474871 ZCCHC8Q6NZY4 707 aaKnown RBP5.77□□□□□ -1.49
NPHP3-206ENST00000474871 PODNQ7Z5L7 613 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 HDAC7Q8WUI4 952 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 RASSF4Q9H2L5 321 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 SLAIN2Q9P270 581 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 A2MP01023 1474 aa5.77□□□□□ -1.49
NPHP3-206ENST00000474871 CTIFO43310 598 aaKnown RBP5.76□□□□□ -1.49
NPHP3-206ENST00000474871 VAMP4O75379 141 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 AP1G2O75843 785 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 TRIM37O94972 964 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 VIL1P09327 827 aaKnown RBP5.76□□□□□ -1.49
NPHP3-206ENST00000474871 BTG3Q14201 252 aaPredicted RBP5.76□□□□□ -1.49
NPHP3-206ENST00000474871 KIAA1614Q5VZ46 1190 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 C16orf54Q6UWD8 224 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 SPOCK2Q92563 424 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 PAGR1Q9BTK6 254 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 TANGO6Q9C0B7 1094 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 CHMP5Q9NZZ3 219 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 DIP2CQ9Y2E4 1556 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 PTPRTO14522 1441 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 COL6A1P12109 1028 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 RRM1P23921 792 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 USP11P51784 963 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 PAK2Q13177 524 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 DDX10Q13206 875 aaKnown RBP5.76□□□□□ -1.49
NPHP3-206ENST00000474871 NOLC1Q14978 699 aaKnown RBP eCLIP5.76□□□□□ -1.49
NPHP3-206ENST00000474871 MYOCDQ8IZQ8 938 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 TRMT1Q9NXH9 659 aaKnown RBP5.76□□□□□ -1.49
NPHP3-206ENST00000474871 SPATA7Q9P0W8 599 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 DDX41Q9UJV9 622 aaKnown RBP5.76□□□□□ -1.49
NPHP3-206ENST00000474871 NOL7Q9UMY1 257 aaKnown RBP5.76□□□□□ -1.49
NPHP3-206ENST00000474871 NEURL4Q96JN8 1562 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 WASHC5Q12768 1159 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 VPS37AQ8NEZ2 397 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 CEP89Q96ST8 783 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 NPC1L1Q9UHC9 1359 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 B4GALT4O60513 344 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 CDKL5O76039 1030 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 CYP1A2P05177 515 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 TMEM110Q86TL2 294 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 TBX22Q9Y458 520 aa5.76□□□□□ -1.49
NPHP3-206ENST00000474871 PRAG1Q86YV5 1406 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 CYP27B1O15528 508 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 ATG7O95352 703 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 CCDC93Q567U6 631 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.75□□□□□ -1.49
NPHP3-206ENST00000474871 FEZ1Q99689 392 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 MADDQ8WXG6 1647 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 SPDYE2BA6NHP3 402 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 SPDYE6P0CI01 402 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 DEUP1Q05D60 604 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 SPDYE2Q495Y8 402 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 BICD1Q96G01 975 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 PDLIM2Q96JY6 352 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 LNPKQ9C0E8 428 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 ZMYM4Q5VZL5 1548 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 REC8O95072 547 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 MRE11P49959 708 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 PLEKHG6Q3KR16 790 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 HHATQ5VTY9 493 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 VPS52Q8N1B4 723 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 CCDC47Q96A33 483 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms