RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 RTN1Q16799 776 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 DUOXA2Q1HG44 320 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 CDCA8Q53HL2 280 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 IER5Q5VY09 327 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 RNF43Q68DV7 783 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 OGFOD2Q6N063 350 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 ZDHHC13Q8IUH4 622 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 TRIM42Q8IWZ5 723 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 TP53INP2Q8IXH6 220 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 CMTR1Q8N1G2 835 aaKnown RBP2.12□□□□□ -2.07
HDAC9-222ENST00000474742 CACTIN-AS1Q8N1I8 211 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 LARGE2Q8N3Y3 721 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 OGFOD1Q8N543 542 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 TRPM4Q8TD43 1214 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 SPACA7Q96KW9 195 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 CALR3Q96L12 384 aaKnown RBP2.12□□□□□ -2.07
HDAC9-222ENST00000474742 NSUN5Q96P11 429 aaKnown RBP2.12□□□□□ -2.07
HDAC9-222ENST00000474742 LACRTQ9GZZ8 138 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 C7orf69Q9H7B7 122 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 SLAIN2Q9P270 581 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 PPME1Q9Y570 386 aa2.12□□□□□ -2.07
HDAC9-222ENST00000474742 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 LINC01387J3KSC0 135 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 M0R2N6 131 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 GAS2O43903 313 aaKnown RBP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 XYLBO75191 536 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 SMNDC1O75940 238 aaKnown RBP eCLIP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 SPINK2P20155 84 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 RFX1P22670 979 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 CD68P34810 354 aaPredicted RBP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 SEC13P55735 322 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 JAG1P78504 1218 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 FAM69CQ0P6D2 419 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 PKN1Q16512 942 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 LARP1Q6PKG0 1096 aaKnown RBP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 POTEAQ6S8J7 498 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 BEND4Q6ZU67 534 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 DTX1Q86Y01 620 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 CLEC10AQ8IUN9 316 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 SIX5Q8N196 739 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 FBXL6Q8N531 539 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 SHKBP1Q8TBC3 707 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 IFT43Q96FT9 208 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 UBL7Q96S82 380 aaPredicted RBP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 C2orf49Q9BVC5 232 aaPredicted RBP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 CARD10Q9BWT7 1032 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 OSBPL1AQ9BXW6 950 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 TLR7Q9NYK1 1049 aaKnown RBP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 KLK14Q9P0G3 267 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 ZFATQ9P243 1243 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 ZMIZ1Q9ULJ6 1067 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 LEMD3Q9Y2U8 911 aa2.11□□□□□ -2.07
HDAC9-222ENST00000474742 RTCBQ9Y3I0 505 aaKnown RBP2.11□□□□□ -2.07
HDAC9-222ENST00000474742 FAM196BA6NMK8 535 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L15C9J2P7 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L10C9JJH3 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L13C9JLJ4 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L12C9JPN9 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L11C9JVI0 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L21D6R901 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L18D6R9N7 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L22D6RA61 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L17D6RBQ6 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L19D6RCP7 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L20D6RJB6 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 ADAMTS4O75173 837 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 MICAL2O94851 1124 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 C8AP07357 584 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 BMP3P12645 472 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 CDC27P30260 824 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 INPP5BP32019 993 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP17L24Q0WX57 530 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 DPYDQ12882 1025 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 SETDB1Q15047 1291 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 UVSSAQ2YD98 709 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 FDX2Q6P4F2 183 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 TXNDC11Q6PKC3 985 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 FAM20CQ8IXL6 584 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 RGL4Q8IZJ4 473 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 ABI1Q8IZP0 508 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 STAG2Q8N3U4 1231 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 CCDC82Q8N4S0 544 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 STK32AQ8WU08 396 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 MYRFLQ96LU7 910 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 MFSD14AQ96MC6 490 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 PIM2Q9P1W9 311 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 TRIM33Q9UPN9 1127 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 USP20Q9Y2K6 914 aa2.1□□□□□ -2.07
HDAC9-222ENST00000474742 CARNS1A5YM72 827 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 PRR19A6NJB7 356 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 SUPT5HO00267 1087 aaKnown RBP2.09□□□□□ -2.07
HDAC9-222ENST00000474742 SCNN1AP37088 669 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 CABP4P57796 275 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 HYAL2Q12891 473 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 C11orf91Q3C1V1 193 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 FAM26DQ5JW98 314 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 TTC39BQ5VTQ0 682 aaPredicted RBP2.09□□□□□ -2.07
HDAC9-222ENST00000474742 CEP135Q66GS9 1140 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms