RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 DBNDD2Q9BQY9 259 aa16.59■□□□□ 0.25
RPGR-206ENST00000474584 LLPHQ9BRT6 129 aaKnown RBP16.59■□□□□ 0.25
RPGR-206ENST00000474584 TRIM5Q9C035 493 aa16.59■□□□□ 0.25
RPGR-206ENST00000474584 ALS2Q96Q42 1657 aa16.59■□□□□ 0.25
RPGR-206ENST00000474584 ZNF165P49910 485 aa16.58■□□□□ 0.25
RPGR-206ENST00000474584 ARID3AQ99856 593 aa16.58■□□□□ 0.25
RPGR-206ENST00000474584 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.25
RPGR-206ENST00000474584 NDUFB9Q9Y6M9 179 aa16.58■□□□□ 0.25
RPGR-206ENST00000474584 SH3TC1Q8TE82 1336 aa16.58■□□□□ 0.25
RPGR-206ENST00000474584 ABCC6O95255 1503 aa16.58■□□□□ 0.25
RPGR-206ENST00000474584 ZC3H6P61129 1189 aaKnown RBP16.58■□□□□ 0.24
RPGR-206ENST00000474584 DDX46Q7L014 1031 aaKnown RBP16.58■□□□□ 0.24
RPGR-206ENST00000474584 LRP10Q7Z4F1 713 aa16.58■□□□□ 0.24
RPGR-206ENST00000474584 IFNL2Q8IZJ0 200 aa16.58■□□□□ 0.24
RPGR-206ENST00000474584 JARID2Q92833 1246 aaPredicted RBP16.58■□□□□ 0.24
RPGR-206ENST00000474584 DDX11Q96FC9 970 aa16.58■□□□□ 0.24
RPGR-206ENST00000474584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.242e-6■■■□□ 17.4
RPGR-206ENST00000474584 MST1RQ04912 1400 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 A0A087WZG4 1122 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 SCRN1Q12765 414 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 PLA2G4DQ86XP0 818 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 KBTBD3Q8NAB2 608 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 FMNL2Q96PY5 1086 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 SEC62Q99442 399 aaKnown RBP16.57■□□□□ 0.24
RPGR-206ENST00000474584 MEGF6O75095 1541 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 PALLDQ8WX93 1383 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 ZNF75DP51815 510 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 CCDC186Q7Z3E2 898 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 DNAJC25Q9H1X3 360 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 USP16Q9Y5T5 823 aa16.57■□□□□ 0.24
RPGR-206ENST00000474584 PFKFB2O60825 505 aa16.56■□□□□ 0.24
RPGR-206ENST00000474584 NAA16Q6N069 864 aaPredicted RBP16.56■□□□□ 0.24
RPGR-206ENST00000474584 ZNF710Q8N1W2 664 aa16.56■□□□□ 0.24
RPGR-206ENST00000474584 TSC1Q92574 1164 aa16.56■□□□□ 0.24
RPGR-206ENST00000474584 PKNOX2Q96KN3 472 aa16.56■□□□□ 0.24
RPGR-206ENST00000474584 PIP4K2AP48426 406 aaPredicted RBP16.56■□□□□ 0.24
RPGR-206ENST00000474584 DHX32Q7L7V1 743 aaKnown RBP16.56■□□□□ 0.24
RPGR-206ENST00000474584 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
RPGR-206ENST00000474584 ATP5J2-PTCD1G3V325 749 aa16.55■□□□□ 0.24
RPGR-206ENST00000474584 CTAGE5O15320 804 aa16.55■□□□□ 0.24
RPGR-206ENST00000474584 PTCD1O75127 700 aaKnown RBP16.55■□□□□ 0.24
RPGR-206ENST00000474584 LRRC2Q9BYS8 371 aa16.55■□□□□ 0.24
RPGR-206ENST00000474584 PLEKHG2Q9H7P9 1386 aa16.55■□□□□ 0.24
RPGR-206ENST00000474584 PKD1L3Q7Z443 1732 aa16.54■□□□□ 0.24
RPGR-206ENST00000474584 GOLGA6L19H0YKK7 550 aa16.54■□□□□ 0.24
RPGR-206ENST00000474584 CHGBP05060 677 aa16.54■□□□□ 0.24
RPGR-206ENST00000474584 TICAM2Q86XR7 235 aa16.54■□□□□ 0.24
RPGR-206ENST00000474584 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
RPGR-206ENST00000474584 C1orf167Q5SNV9 1468 aa16.54■□□□□ 0.24
RPGR-206ENST00000474584 RIOK3O14730 519 aaKnown RBP16.54■□□□□ 0.24
RPGR-206ENST00000474584 NSUN7Q8NE18 718 aaKnown RBP16.54■□□□□ 0.24
RPGR-206ENST00000474584 PLBD2Q8NHP8 589 aa16.54■□□□□ 0.24
RPGR-206ENST00000474584 DSCC1Q9BVC3 393 aa16.54■□□□□ 0.24
RPGR-206ENST00000474584 BCL2L12Q9HB09 334 aa16.54■□□□□ 0.24
RPGR-206ENST00000474584 SPEF2Q9C093 1822 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 ZSCAN25Q6NSZ9 544 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 LMBR1LQ6UX01 489 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 STOX1Q6ZVD7 989 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 PAG1Q9NWQ8 432 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 CLIP2Q9UDT6 1046 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 PTPDC1A2A3K4 754 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 CSB-PGBD3P0DP91 1061 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 CDC25BP30305 580 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 CASP7P55210 303 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 CEBPZQ03701 1054 aaKnown RBP16.53■□□□□ 0.24
RPGR-206ENST00000474584 STX1AQ16623 288 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 ATL3Q6DD88 541 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 CCDC73Q6ZRK6 1079 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 CHMP4CQ96CF2 233 aa16.53■□□□□ 0.24
RPGR-206ENST00000474584 GOLIM4O00461 696 aa16.52■□□□□ 0.24
RPGR-206ENST00000474584 SMAP1Q8IYB5 467 aaPredicted RBP16.52■□□□□ 0.24
RPGR-206ENST00000474584 ZNF396Q96N95 335 aaPredicted RBP16.52■□□□□ 0.24
RPGR-206ENST00000474584 NEUROD6Q96NK8 337 aa16.52■□□□□ 0.24
RPGR-206ENST00000474584 CCDC9Q9Y3X0 531 aaKnown RBP16.52■□□□□ 0.24
RPGR-206ENST00000474584 COL18A1P39060 1754 aa16.52■□□□□ 0.24
RPGR-206ENST00000474584 LRMPQ12912 555 aa16.52■□□□□ 0.23
RPGR-206ENST00000474584 CCAR1Q8IX12 1150 aaKnown RBP16.52■□□□□ 0.23
RPGR-206ENST00000474584 NRBP1Q9UHY1 535 aa16.52■□□□□ 0.23
RPGR-206ENST00000474584 RCOR1Q9UKL0 485 aa16.52■□□□□ 0.23
RPGR-206ENST00000474584 PARP4Q9UKK3 1724 aaKnown RBP16.52■□□□□ 0.23
RPGR-206ENST00000474584 ADD1P35611 737 aaKnown RBP16.51■□□□□ 0.23
RPGR-206ENST00000474584 APOBRQ0VD83 1088 aa16.51■□□□□ 0.23
RPGR-206ENST00000474584 AGXT2Q9BYV1 514 aa16.51■□□□□ 0.23
RPGR-206ENST00000474584 GPR108Q9NPR9 543 aa16.51■□□□□ 0.23
RPGR-206ENST00000474584 NUP188Q5SRE5 1749 aa16.51■□□□□ 0.23
RPGR-206ENST00000474584 GLI3P10071 1580 aa16.51■□□□□ 0.23
RPGR-206ENST00000474584 FAM177BA6PVY3 158 aa16.5■□□□□ 0.23
RPGR-206ENST00000474584 KINO60870 393 aaKnown RBP16.5■□□□□ 0.23
RPGR-206ENST00000474584 SARM1Q6SZW1 724 aa16.5■□□□□ 0.23
RPGR-206ENST00000474584 ADAMTSL3P82987 1691 aa16.5■□□□□ 0.23
RPGR-206ENST00000474584 CTIFO43310 598 aaKnown RBP16.5■□□□□ 0.23
RPGR-206ENST00000474584 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
RPGR-206ENST00000474584 FOSBP53539 338 aa16.5■□□□□ 0.23
RPGR-206ENST00000474584 CABP4P57796 275 aa16.5■□□□□ 0.23
RPGR-206ENST00000474584 EXOSC10Q01780 885 aaKnown RBP16.5■□□□□ 0.23
RPGR-206ENST00000474584 ZMYM1Q5SVZ6 1142 aa16.5■□□□□ 0.23
RPGR-206ENST00000474584 C16orf45Q96MC5 204 aaPredicted RBP16.5■□□□□ 0.23
RPGR-206ENST00000474584 TJP1Q07157 1748 aa16.5■□□□□ 0.23
RPGR-206ENST00000474584 CYP27B1O15528 508 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms