RNA–Protein interactions for RNA: ENST00000474457.1

FBXO9-209, Transcript of F-box protein 9, humanhuman

TSL 1 (best)

Gene FBXO9, Length 2,913 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO9-209ENST00000474457 NPHP1O15259 732 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 TTC31Q49AM3 519 aaPredicted RBP8.42□□□□□ -1.06
FBXO9-209ENST00000474457 ESCO1Q5FWF5 840 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 LARP1BQ659C4 914 aaKnown RBP8.42□□□□□ -1.06
FBXO9-209ENST00000474457 LEKR1Q6ZMV7 388 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 NFATC2IPQ8NCF5 419 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 PPP1R13BQ96KQ4 1090 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 DCCP43146 1447 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
FBXO9-209ENST00000474457 IL13P35225 146 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 ACTN2P35609 894 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 MAGEA9P43362 315 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 SMC1AQ14683 1233 aaKnown RBP8.42□□□□□ -1.06
FBXO9-209ENST00000474457 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 LSG1Q9H089 658 aaKnown RBP8.42□□□□□ -1.06
FBXO9-209ENST00000474457 PDRG1Q9NUG6 133 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 EXOC6BQ9Y2D4 811 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 CHMP3Q9Y3E7 222 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 CYP46A1Q9Y6A2 500 aa8.42□□□□□ -1.06
FBXO9-209ENST00000474457 PHRF1Q9P1Y6 1649 aaKnown RBP8.42□□□□□ -1.06
FBXO9-209ENST00000474457 RGPD5Q99666 1765 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 GNAI3P08754 354 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 KRT24Q2M2I5 525 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 NUTM2GQ5VZR2 741 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 TSHZ3Q63HK5 1081 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 DHX37Q8IY37 1157 aaKnown RBP8.41□□□□□ -1.06
FBXO9-209ENST00000474457 CCDC82Q8N4S0 544 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 LEO1Q8WVC0 666 aaPredicted RBP8.41□□□□□ -1.06
FBXO9-209ENST00000474457 NAT10Q9H0A0 1025 aaKnown RBP8.41□□□□□ -1.06
FBXO9-209ENST00000474457 C19orf44Q9H6X5 657 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 TTC41PQ6P2S7 1318 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 HMOX1P09601 288 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 ST5P78524 1137 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 MKRN3Q13064 507 aaKnown RBP8.41□□□□□ -1.06
FBXO9-209ENST00000474457 LRRFIP1Q32MZ4 808 aaKnown RBP8.41□□□□□ -1.06
FBXO9-209ENST00000474457 JAKMIP3Q5VZ66 844 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 TRAIPQ9BWF2 469 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 DEF6Q9H4E7 631 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 DNAI1Q9UI46 699 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 JRKLQ9Y4A0 524 aa8.41□□□□□ -1.06
FBXO9-209ENST00000474457 TRIM66O15016 1216 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 SOX12O15370 315 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 TADA3O75528 432 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 ETF1P62495 437 aaKnown RBP8.4□□□□□ -1.06
FBXO9-209ENST00000474457 ARID5BQ14865 1188 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 E4F1Q66K89 784 aaPredicted RBP8.4□□□□□ -1.06
FBXO9-209ENST00000474457 CNTROBQ8N137 903 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 GPR161Q8N6U8 529 aaKnown RBP8.4□□□□□ -1.06
FBXO9-209ENST00000474457 RUFY2Q8WXA3 655 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 PPM1EQ8WY54 764 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 ANO10Q9NW15 660 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 MED1Q15648 1581 aaPredicted RBP8.4□□□□□ -1.06
FBXO9-209ENST00000474457 SLIT3O75094 1523 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 RPS6KA5O75582 802 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 LARGE1O95461 756 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 TBC1D8O95759 1140 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 DSG3P32926 999 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 PSEN1P49768 467 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 CC2D1AQ6P1N0 951 aaPredicted RBP8.4□□□□□ -1.06
FBXO9-209ENST00000474457 CEP57L1Q8IYX8 460 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 DDX17Q92841 729 aaKnown RBP8.4□□□□□ -1.06
FBXO9-209ENST00000474457 ZSWIM6Q9HCJ5 1215 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 ARFGAP3Q9NP61 516 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 HDAC5Q9UQL6 1122 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 USP16Q9Y5T5 823 aa8.4□□□□□ -1.06
FBXO9-209ENST00000474457 MAP3K19Q56UN5 1328 aa8.4□□□□□ -1.07
FBXO9-209ENST00000474457 NR1I2O75469 434 aa8.4□□□□□ -1.07
FBXO9-209ENST00000474457 SFPQP23246 707 aaKnown RBP eCLIP8.4□□□□□ -1.07
FBXO9-209ENST00000474457 ATP8B2P98198 1209 aa8.4□□□□□ -1.07
FBXO9-209ENST00000474457 ANKRD1Q15327 319 aa8.4□□□□□ -1.07
FBXO9-209ENST00000474457 CDC37L1Q7L3B6 337 aa8.4□□□□□ -1.07
FBXO9-209ENST00000474457 UNC5CLQ8IV45 518 aa8.4□□□□□ -1.07
FBXO9-209ENST00000474457 ZNF622Q969S3 477 aaKnown RBP eCLIP8.4□□□□□ -1.076e-12■□□□□ 8.2
FBXO9-209ENST00000474457 LCMT1Q9UIC8 334 aa8.4□□□□□ -1.07
FBXO9-209ENST00000474457 FOXO3O43524 673 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 RAB11FIP3O75154 756 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 HSP90AB2PQ58FF8 381 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 HOMER1Q86YM7 354 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 RASEFQ8IZ41 740 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 KCNB2Q92953 911 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 MKRN1Q9UHC7 482 aaKnown RBP8.39□□□□□ -1.07
FBXO9-209ENST00000474457 PXDNQ92626 1479 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.39□□□□□ -1.07
FBXO9-209ENST00000474457 CHL1O00533 1208 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 SMC2O95347 1197 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 ATP2B1P20020 1258 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 BRD2P25440 801 aaKnown RBP8.39□□□□□ -1.07
FBXO9-209ENST00000474457 LMAN1P49257 510 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 JAKMIP1Q96N16 626 aaKnown RBP8.39□□□□□ -1.07
FBXO9-209ENST00000474457 IL25Q9H293 177 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 ADAM21Q9UKJ8 722 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 CFAP45Q9UL16 551 aa8.39□□□□□ -1.07
FBXO9-209ENST00000474457 APPP05067 770 aa8.38□□□□□ -1.07
FBXO9-209ENST00000474457 ZKSCAN1P17029 563 aaPredicted RBP8.38□□□□□ -1.07
FBXO9-209ENST00000474457 EIF4A2Q14240 407 aaKnown RBP8.38□□□□□ -1.07
FBXO9-209ENST00000474457 C11orf57Q6ZUT1 292 aaPredicted RBP8.38□□□□□ -1.07
FBXO9-209ENST00000474457 CCDC91Q7Z6B0 441 aa8.38□□□□□ -1.07
FBXO9-209ENST00000474457 SUGP1Q8IWZ8 645 aaKnown RBP8.38□□□□□ -1.07
FBXO9-209ENST00000474457 REXO1L1PQ8IX06 675 aa8.38□□□□□ -1.07
FBXO9-209ENST00000474457 MSL3Q8N5Y2 521 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms