RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 HSP90AB3PQ58FF7 597 aa9.07□□□□□ -0.96
GPNMB-209ENST00000474157 CARD10Q9BWT7 1032 aa9.07□□□□□ -0.96
GPNMB-209ENST00000474157 QTRT2Q9H974 415 aaKnown RBP9.07□□□□□ -0.96
GPNMB-209ENST00000474157 HCN4Q9Y3Q4 1203 aa9.07□□□□□ -0.96
GPNMB-209ENST00000474157 LRRIQ1Q96JM4 1722 aa9.07□□□□□ -0.96
GPNMB-209ENST00000474157 MROH2AA6NES4 1674 aa9.07□□□□□ -0.96
GPNMB-209ENST00000474157 SPAG9O60271 1321 aaKnown RBP9.06□□□□□ -0.96
GPNMB-209ENST00000474157 CDK13Q14004 1512 aaKnown RBP9.06□□□□□ -0.96
GPNMB-209ENST00000474157 NRG2O14511 850 aaPredicted RBP9.06□□□□□ -0.96
GPNMB-209ENST00000474157 MAFGO15525 162 aa9.06□□□□□ -0.96
GPNMB-209ENST00000474157 DGAT1O75907 488 aa9.06□□□□□ -0.96
GPNMB-209ENST00000474157 RXRBP28702 533 aa9.06□□□□□ -0.96
GPNMB-209ENST00000474157 SF3B2Q13435 895 aaKnown RBP9.06□□□□□ -0.96
GPNMB-209ENST00000474157 CTC1Q2NKJ3 1217 aa9.06□□□□□ -0.96
GPNMB-209ENST00000474157 C4orf17Q53FE4 359 aa9.06□□□□□ -0.96
GPNMB-209ENST00000474157 COX20Q5RI15 118 aa9.06□□□□□ -0.96
GPNMB-209ENST00000474157 TRIM46Q7Z4K8 759 aa9.06□□□□□ -0.96
GPNMB-209ENST00000474157 RNF217Q8TC41 542 aa9.06□□□□□ -0.96
GPNMB-209ENST00000474157 TNRQ92752 1358 aa9.06□□□□□ -0.96
GPNMB-209ENST00000474157 MED14O60244 1454 aa9.05□□□□□ -0.96
GPNMB-209ENST00000474157 OFD1O75665 1012 aa9.05□□□□□ -0.96
GPNMB-209ENST00000474157 SMCPP49901 116 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-209ENST00000474157 MRE11P49959 708 aa9.05□□□□□ -0.96
GPNMB-209ENST00000474157 SCARF1Q14162 830 aa9.05□□□□□ -0.96
GPNMB-209ENST00000474157 ALDH16A1Q8IZ83 802 aa9.05□□□□□ -0.96
GPNMB-209ENST00000474157 DNMT1P26358 1616 aaKnown RBP9.05□□□□□ -0.96
GPNMB-209ENST00000474157 NEURL4Q96JN8 1562 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 CCDC66A2RUB6 948 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 TTC36A6NLP5 189 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 AXIN1O15169 862 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 TXLNAP40222 546 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 PHKA2P46019 1235 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 MEX3CQ5U5Q3 659 aaKnown RBP9.04□□□□□ -0.96
GPNMB-209ENST00000474157 CTR9Q6PD62 1173 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 PRICKLE2Q7Z3G6 844 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 NBPF11Q86T75 865 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
GPNMB-209ENST00000474157 MYO19Q96H55 970 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 PHACTR1Q9C0D0 580 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 RBM28Q9NW13 759 aaKnown RBP9.04□□□□□ -0.96
GPNMB-209ENST00000474157 LRFN2Q9ULH4 789 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 CLIP1P30622 1438 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 ZBED9Q6R2W3 1325 aa9.04□□□□□ -0.96
GPNMB-209ENST00000474157 ARHGAP35Q9NRY4 1499 aa9.03□□□□□ -0.96
GPNMB-209ENST00000474157 SPATA31C2B4DYI2 1134 aa9.03□□□□□ -0.96
GPNMB-209ENST00000474157 MPSTP25325 297 aa9.03□□□□□ -0.96
GPNMB-209ENST00000474157 POU4F2Q12837 409 aa9.03□□□□□ -0.96
GPNMB-209ENST00000474157 NBPF1Q3BBV0 1214 aa9.03□□□□□ -0.96
GPNMB-209ENST00000474157 LYSMD3Q7Z3D4 306 aa9.03□□□□□ -0.96
GPNMB-209ENST00000474157 PRDM10Q9NQV6 1147 aa9.03□□□□□ -0.96
GPNMB-209ENST00000474157 ZHX1Q9UKY1 873 aaPredicted RBP9.03□□□□□ -0.96
GPNMB-209ENST00000474157 SETD1AO15047 1707 aaKnown RBP9.02□□□□□ -0.96
GPNMB-209ENST00000474157 RNF17Q9BXT8 1623 aaKnown RBP9.02□□□□□ -0.96
GPNMB-209ENST00000474157 JCADQ9P266 1359 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 FAM135AQ9P2D6 1515 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 FSD2A1L4K1 749 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 TNFRSF10BO14763 440 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 ECM1Q16610 540 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 RTN1Q16799 776 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 NBPF10Q6P3W6 841 aaKnown RBP9.02□□□□□ -0.97
GPNMB-209ENST00000474157 KIAA1211Q6ZU35 1233 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 AIDAQ96BJ3 306 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 BACH2Q9BYV9 841 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 TROQ12816 1431 aaPredicted RBP9.02□□□□□ -0.97
GPNMB-209ENST00000474157 CEP162Q5TB80 1403 aa9.02□□□□□ -0.97
GPNMB-209ENST00000474157 FIGNL2A6NMB9 653 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 FAM13AO94988 1023 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 RHOQP17081 205 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 HNRNPMP52272 730 aaKnown RBP eCLIP9.01□□□□□ -0.97
GPNMB-209ENST00000474157 MARSP56192 900 aaKnown RBP9.01□□□□□ -0.97
GPNMB-209ENST00000474157 ARHGAP4P98171 946 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 DGKZQ13574 1117 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 HS1BP3Q53T59 392 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 CREBRFQ8IUR6 639 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 CRIPAKQ8N1N5 446 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 ZFP42Q96MM3 310 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 MYH16Q9H6N6 1097 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 BSDC1Q9NW68 430 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-209ENST00000474157 RAI14Q9P0K7 980 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 STIM2Q9P246 746 aa9.01□□□□□ -0.97
GPNMB-209ENST00000474157 SOS2Q07890 1332 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-209ENST00000474157 ABCC1P33527 1531 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 SUPT6HQ7KZ85 1726 aaKnown RBP9□□□□□ -0.97
GPNMB-209ENST00000474157 MYO5CQ9NQX4 1742 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 MIA2Q96PC5 1412 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 IGSF3O75054 1194 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 NPR3P17342 541 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 C1orf53Q5VUE5 145 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 CASC1Q6TDU7 716 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 EGFL6Q8IUX8 553 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 GPATCH11Q8N954 259 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 FOXD4L4Q8WXT5 416 aaPredicted RBP9□□□□□ -0.97
GPNMB-209ENST00000474157 KLK14Q9P0G3 267 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 A2MP01023 1474 aa9□□□□□ -0.97
GPNMB-209ENST00000474157 NINLQ9Y2I6 1382 aa8.99□□□□□ -0.97
GPNMB-209ENST00000474157 ST8SIA5O15466 376 aa8.99□□□□□ -0.97
GPNMB-209ENST00000474157 CALRP27797 417 aaKnown RBP8.99□□□□□ -0.97
GPNMB-209ENST00000474157 SSR1P43307 286 aaKnown RBP8.99□□□□□ -0.97
GPNMB-209ENST00000474157 ANAPC15P60006 121 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms