RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 COL15A1P39059 1388 aa16.71■□□□□ 0.27
NHLRC3-204ENST00000473371 ATP5JP18859 108 aa16.71■□□□□ 0.27
NHLRC3-204ENST00000473371 PTPN14Q15678 1187 aa16.71■□□□□ 0.27
NHLRC3-204ENST00000473371 FILIP1Q7Z7B0 1213 aa16.71■□□□□ 0.27
NHLRC3-204ENST00000473371 DNAJC2Q99543 621 aaKnown RBP16.71■□□□□ 0.27
NHLRC3-204ENST00000473371 KINO60870 393 aaKnown RBP16.71■□□□□ 0.27
NHLRC3-204ENST00000473371 SKILP12757 684 aa16.71■□□□□ 0.27
NHLRC3-204ENST00000473371 SEC62Q99442 399 aaKnown RBP16.71■□□□□ 0.27
NHLRC3-204ENST00000473371 RCOR1Q9UKL0 485 aa16.71■□□□□ 0.27
NHLRC3-204ENST00000473371 RGPD2P0DJD1 1756 aa16.71■□□□□ 0.27
NHLRC3-204ENST00000473371 HEG1Q9ULI3 1381 aa16.71■□□□□ 0.26
NHLRC3-204ENST00000473371 USP27XA6NNY8 438 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 CYP21A2P08686 494 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 FTOQ9C0B1 505 aaKnown RBP eCLIP16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 DBNLQ9UJU6 430 aaKnown RBP16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 USP16Q9Y5T5 823 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 PXDNQ92626 1479 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 NCAPD2Q15021 1401 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 CCDC69A6NI79 296 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 RBM6P78332 1123 aaKnown RBP16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 KCNH5Q8NCM2 988 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 SMARCC2Q8TAQ2 1214 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 CHGBP05060 677 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 LLPHQ9BRT6 129 aaKnown RBP16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 GOLPH3LQ9H4A5 285 aa16.7■□□□□ 0.26
NHLRC3-204ENST00000473371 A0A087WWV3 80 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 NEURL1BA8MQ27 555 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 MYL6BP14649 208 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 ADD1P35611 737 aaKnown RBP16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 TNNI3KQ59H18 835 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 NAA16Q6N069 864 aaPredicted RBP16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 MYD88Q99836 296 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 ANO10Q9NW15 660 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 FPGT-TNNI3KV9GXZ4 949 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 PFKFB2O60825 505 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 TFCP2Q12800 502 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 MCMDC2Q4G0Z9 681 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 NSUN7Q8NE18 718 aaKnown RBP16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 ZNF609O15014 1411 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 NFAT5O94916 1531 aa16.69■□□□□ 0.26
NHLRC3-204ENST00000473371 PSME1Q06323 249 aa16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 GCKRQ14397 625 aa16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 PDIA6Q15084 440 aa16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 ZNF771Q7L3S4 317 aaPredicted RBP16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 ZNF396Q96N95 335 aaPredicted RBP16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 TRMT1Q9NXH9 659 aaKnown RBP16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 NAP1L2Q9ULW6 460 aaPredicted RBP16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 USP28Q96RU2 1077 aa16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 PTPDC1A2A3K4 754 aa16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 FSIP1Q8NA03 581 aa16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 FBXW7Q969H0 707 aa16.68■□□□□ 0.26
NHLRC3-204ENST00000473371 APOBRQ0VD83 1088 aa16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 DHX40Q8IX18 779 aaKnown RBP16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 CEP57L1Q8IYX8 460 aa16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 COPRSQ9NQ92 184 aa16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 ZNF215Q9UL58 517 aaPredicted RBP16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 ME1P48163 572 aa16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 CCT2P78371 535 aaKnown RBP16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 FAM160A1Q05DH4 1040 aa16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 SNW1Q13573 536 aaKnown RBP16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 STOX1Q6ZVD7 989 aa16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 DDX46Q7L014 1031 aaKnown RBP16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 AOPEPQ8N6M6 819 aa16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 XAGE3Q8WTP9 111 aa16.67■□□□□ 0.26
NHLRC3-204ENST00000473371 HMGB1P09429 215 aaKnown RBP16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 NYAP1Q6ZVC0 841 aa16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 DHX32Q7L7V1 743 aaKnown RBP16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 DBNDD2Q9BQY9 259 aa16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 V9GYY5 206 aaPredicted RBP16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 CCZ1BP86790 482 aa16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 CCZ1P86791 482 aaPredicted RBP16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 GUCY1B3Q02153 619 aa16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 ZNF397Q8NF99 534 aaPredicted RBP16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 KIF18AQ8NI77 898 aa16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 MRC1P22897 1456 aa16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 OVOS2A0A0G2JMS6 1433 aa16.66■□□□□ 0.26
NHLRC3-204ENST00000473371 PPFIA3O75145 1194 aa16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 CTDNEP1O95476 244 aa16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 GABPB1Q06547 395 aaPredicted RBP16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 COPS6Q7L5N1 327 aa16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 ERCC4Q92889 916 aaPredicted RBP16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 METTL22Q9BUU2 404 aaPredicted RBP16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 NAT10Q9H0A0 1025 aaKnown RBP16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 MORC2Q9Y6X9 1032 aaPredicted RBP16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 RFX7Q2KHR2 1363 aa16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 PTPN12Q05209 780 aaKnown RBP16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 ATL3Q6DD88 541 aa16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 CCAR2Q8N163 923 aaKnown RBP16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 ENGASEQ8NFI3 743 aa16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 HAUS7Q99871 368 aa16.65■□□□□ 0.26
NHLRC3-204ENST00000473371 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.26
NHLRC3-204ENST00000473371 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
NHLRC3-204ENST00000473371 NCOA5Q9HCD5 579 aaKnown RBP16.64■□□□□ 0.25
NHLRC3-204ENST00000473371 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms