RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CXCL9Q07325 125 aa9.07□□□□□ -0.96
CKS1B-205ENST00000473344 TNIP1Q15025 636 aa9.07□□□□□ -0.96
CKS1B-205ENST00000473344 FAM161AQ3B820 660 aa9.07□□□□□ -0.96
CKS1B-205ENST00000473344 HSP90AB3PQ58FF7 597 aa9.07□□□□□ -0.96
CKS1B-205ENST00000473344 DDX46Q7L014 1031 aaKnown RBP9.07□□□□□ -0.96
CKS1B-205ENST00000473344 MPNDQ8N594 471 aa9.07□□□□□ -0.96
CKS1B-205ENST00000473344 CFAP44Q96MT7 982 aa9.07□□□□□ -0.96
CKS1B-205ENST00000473344 PLEKHF1Q96S99 279 aa9.07□□□□□ -0.96
CKS1B-205ENST00000473344 ZNF408Q9H9D4 720 aa9.07□□□□□ -0.96
CKS1B-205ENST00000473344 ABCC4O15439 1325 aa9.06□□□□□ -0.96
CKS1B-205ENST00000473344 CDHR2Q9BYE9 1310 aa9.06□□□□□ -0.96
CKS1B-205ENST00000473344 CA12O43570 354 aa9.06□□□□□ -0.96
CKS1B-205ENST00000473344 GMPSP49915 693 aaPredicted RBP9.06□□□□□ -0.96
CKS1B-205ENST00000473344 AIMP1Q12904 312 aaKnown RBP9.06□□□□□ -0.96
CKS1B-205ENST00000473344 DOK7Q18PE1 504 aa9.06□□□□□ -0.96
CKS1B-205ENST00000473344 SLC10A5Q5PT55 438 aa9.06□□□□□ -0.96
CKS1B-205ENST00000473344 CIAPIN1Q6FI81 312 aa9.06□□□□□ -0.96
CKS1B-205ENST00000473344 SAPCD2Q86UD0 394 aa9.06□□□□□ -0.96
CKS1B-205ENST00000473344 SLC51AQ86UW1 340 aa9.06□□□□□ -0.96
CKS1B-205ENST00000473344 SP8Q8IXZ3 490 aa9.06□□□□□ -0.96
CKS1B-205ENST00000473344 RTFDC1Q9BY42 306 aaPredicted RBP9.06□□□□□ -0.96
CKS1B-205ENST00000473344 TRMT112Q9UI30 125 aaKnown RBP9.06□□□□□ -0.96
CKS1B-205ENST00000473344 LTBP1Q14766 1721 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 KDM3BQ7LBC6 1761 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 H7C1D1 291 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 AOC2O75106 756 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 RAD17O75943 681 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 HCLS1P14317 486 aaPredicted RBP9.05□□□□□ -0.96
CKS1B-205ENST00000473344 RIPK4P57078 832 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 MLLT1Q03111 559 aaPredicted RBP9.05□□□□□ -0.96
CKS1B-205ENST00000473344 LMOD3Q0VAK6 560 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 KIAA2012Q0VF49 1180 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 ERICH6Q7L0X2 663 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 CDC37L1Q7L3B6 337 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 COPS6Q7L5N1 327 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 ZC3H15Q8WU90 426 aaKnown RBP9.05□□□□□ -0.96
CKS1B-205ENST00000473344 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 GLIS2Q9BZE0 524 aaPredicted RBP9.05□□□□□ -0.96
CKS1B-205ENST00000473344 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 SH3TC1Q8TE82 1336 aa9.05□□□□□ -0.96
CKS1B-205ENST00000473344 NUP98P52948 1817 aa9.04□□□□□ -0.96
CKS1B-205ENST00000473344 RIMBP2O15034 1052 aa9.04□□□□□ -0.96
CKS1B-205ENST00000473344 ANXA1P04083 346 aa9.04□□□□□ -0.96
CKS1B-205ENST00000473344 BRPF1P55201 1214 aaPredicted RBP9.04□□□□□ -0.96
CKS1B-205ENST00000473344 GRAPQ13588 217 aa9.04□□□□□ -0.96
CKS1B-205ENST00000473344 PDIA6Q15084 440 aa9.04□□□□□ -0.96
CKS1B-205ENST00000473344 TMC4Q7Z404 712 aa9.04□□□□□ -0.96
CKS1B-205ENST00000473344 NLRP10Q86W26 655 aa9.04□□□□□ -0.96
CKS1B-205ENST00000473344 GRAPLQ8TC17 118 aaPredicted RBP9.04□□□□□ -0.96
CKS1B-205ENST00000473344 HHIPL1Q96JK4 782 aa9.04□□□□□ -0.96
CKS1B-205ENST00000473344 HS3ST6Q96QI5 342 aa9.04□□□□□ -0.96
CKS1B-205ENST00000473344 BABAM1Q9NWV8 329 aa9.04□□□□□ -0.96
CKS1B-205ENST00000473344 CNOT7Q9UIV1 285 aaKnown RBP9.04□□□□□ -0.96
CKS1B-205ENST00000473344 THSD7BQ9C0I4 1608 aa9.03□□□□□ -0.96
CKS1B-205ENST00000473344 TCIRG1Q13488 830 aa9.03□□□□□ -0.96
CKS1B-205ENST00000473344 WASHC4Q2M389 1173 aa9.03□□□□□ -0.96
CKS1B-205ENST00000473344 PROSER3Q2NL68 480 aa9.03□□□□□ -0.96
CKS1B-205ENST00000473344 LRP10Q7Z4F1 713 aa9.03□□□□□ -0.96
CKS1B-205ENST00000473344 ZNF710Q8N1W2 664 aa9.03□□□□□ -0.96
CKS1B-205ENST00000473344 XAGE3Q8WTP9 111 aa9.03□□□□□ -0.96
CKS1B-205ENST00000473344 PGAP2Q9UHJ9 254 aa9.03□□□□□ -0.96
CKS1B-205ENST00000473344 NSFL1CQ9UNZ2 370 aaKnown RBP9.03□□□□□ -0.96
CKS1B-205ENST00000473344 GTF3C3Q9Y5Q9 886 aa9.03□□□□□ -0.96
CKS1B-205ENST00000473344 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
CKS1B-205ENST00000473344 C6orf229H3BNL8 230 aa9.02□□□□□ -0.97
CKS1B-205ENST00000473344 HUNKP57058 714 aa9.02□□□□□ -0.97
CKS1B-205ENST00000473344 NOGQ13253 232 aa9.02□□□□□ -0.97
CKS1B-205ENST00000473344 MICALL2Q8IY33 904 aa9.02□□□□□ -0.97
CKS1B-205ENST00000473344 TRPM4Q8TD43 1214 aa9.02□□□□□ -0.97
CKS1B-205ENST00000473344 LAS1LQ9Y4W2 734 aaKnown RBP9.02□□□□□ -0.97
CKS1B-205ENST00000473344 HOXB1P14653 301 aaPredicted RBP9.01□□□□□ -0.97
CKS1B-205ENST00000473344 HIRAP54198 1017 aaPredicted RBP9.01□□□□□ -0.97
CKS1B-205ENST00000473344 DGKZQ13574 1117 aa9.01□□□□□ -0.97
CKS1B-205ENST00000473344 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
CKS1B-205ENST00000473344 USP48Q86UV5 1035 aa9.01□□□□□ -0.97
CKS1B-205ENST00000473344 DPF2Q92785 391 aa9.01□□□□□ -0.97
CKS1B-205ENST00000473344 ZNF428Q96B54 188 aa9.01□□□□□ -0.97
CKS1B-205ENST00000473344 DCPSQ96C86 337 aaKnown RBP9.01□□□□□ -0.97
CKS1B-205ENST00000473344 EYA3Q99504 573 aa9.01□□□□□ -0.97
CKS1B-205ENST00000473344 MCOLN1Q9GZU1 580 aa9.01□□□□□ -0.97
CKS1B-205ENST00000473344 DLG5Q8TDM6 1919 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 YDJCA8MPS7 323 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 HOXB3P14651 431 aaPredicted RBP9□□□□□ -0.97
CKS1B-205ENST00000473344 TMPOP42166 694 aaKnown RBP9□□□□□ -0.97
CKS1B-205ENST00000473344 RGS19P49795 217 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 TBC1D10BQ4KMP7 808 aaPredicted RBP9□□□□□ -0.97
CKS1B-205ENST00000473344 RBM26Q5T8P6 1007 aaKnown RBP9□□□□□ -0.97
CKS1B-205ENST00000473344 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 ANKRD13DQ6ZTN6 518 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 SAMD7Q7Z3H4 446 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 KRT26Q7Z3Y9 468 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 C2orf69Q8N8R5 385 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 FAM89AQ96GI7 184 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 DBNDD1Q9H9R9 158 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 CHPF2Q9P2E5 772 aa9□□□□□ -0.97
CKS1B-205ENST00000473344 DBF4Q9UBU7 674 aaPredicted RBP9□□□□□ -0.97
CKS1B-205ENST00000473344 SHTN1A0MZ66 631 aa8.99□□□□□ -0.97
CKS1B-205ENST00000473344 PSMD14O00487 310 aa8.99□□□□□ -0.97
CKS1B-205ENST00000473344 SLC34A2O95436 690 aa8.99□□□□□ -0.97
CKS1B-205ENST00000473344 RPS12P25398 132 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms