RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 UBN2Q6ZU65 1347 aa11.6□□□□□ -0.55
SMC4-214ENST00000472991 SERPINB2P05120 415 aa11.6□□□□□ -0.55
SMC4-214ENST00000472991 FKBP5Q13451 457 aaPredicted RBP11.6□□□□□ -0.55
SMC4-214ENST00000472991 ALDH1L2Q3SY69 923 aa11.6□□□□□ -0.55
SMC4-214ENST00000472991 HSP90AB3PQ58FF7 597 aa11.6□□□□□ -0.55
SMC4-214ENST00000472991 SETDB2Q96T68 719 aa11.6□□□□□ -0.55
SMC4-214ENST00000472991 IBTKQ9P2D0 1353 aaPredicted RBP11.59□□□□□ -0.55
SMC4-214ENST00000472991 PI4KAP2A4QPH2 592 aa11.59□□□□□ -0.55
SMC4-214ENST00000472991 FAM177BA6PVY3 158 aa11.59□□□□□ -0.55
SMC4-214ENST00000472991 RARSP54136 660 aaKnown RBP11.59□□□□□ -0.55
SMC4-214ENST00000472991 TCIRG1Q13488 830 aa11.59□□□□□ -0.55
SMC4-214ENST00000472991 KSR2Q6VAB6 950 aa11.59□□□□□ -0.55
SMC4-214ENST00000472991 ZNF34Q8IZ26 560 aa11.59□□□□□ -0.55
SMC4-214ENST00000472991 PI4KAP1Q8N8J0 262 aa11.59□□□□□ -0.55
SMC4-214ENST00000472991 KIAA1468Q9P260 1216 aa11.59□□□□□ -0.55
SMC4-214ENST00000472991 MAP3K2Q9Y2U5 619 aa11.59□□□□□ -0.55
SMC4-214ENST00000472991 TAF1P21675 1872 aa11.59□□□□□ -0.55
SMC4-214ENST00000472991 SPEF2Q9C093 1822 aa11.58□□□□□ -0.56
SMC4-214ENST00000472991 ARFGEF1Q9Y6D6 1849 aa11.58□□□□□ -0.56
SMC4-214ENST00000472991 ATP5J2-PTCD1G3V325 749 aa11.58□□□□□ -0.56
SMC4-214ENST00000472991 PRR5LQ6MZQ0 368 aa11.58□□□□□ -0.56
SMC4-214ENST00000472991 NBPF5PQ86XG9 351 aaPredicted RBP11.58□□□□□ -0.56
SMC4-214ENST00000472991 MYD88Q99836 296 aa11.58□□□□□ -0.56
SMC4-214ENST00000472991 METTL22Q9BUU2 404 aaPredicted RBP11.58□□□□□ -0.56
SMC4-214ENST00000472991 FHDC1Q9C0D6 1143 aaPredicted RBP11.58□□□□□ -0.56
SMC4-214ENST00000472991 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 TRIM6-TRIM34B2RNG4 842 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 F6X3S4 739 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 NPHP1O15259 732 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
SMC4-214ENST00000472991 PARP10Q53GL7 1025 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 SUSD4Q5VX71 490 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 LAPTM4BQ86VI4 370 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 NLRP10Q86W26 655 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 CCDC24Q8N4L8 307 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 CNBD1Q8NA66 436 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 DNAAF4Q8WXU2 420 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 ISCA1Q9BUE6 129 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 PTPRCP08575 1304 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
SMC4-214ENST00000472991 ABCC12Q96J65 1359 aa11.56□□□□□ -0.56
SMC4-214ENST00000472991 MAP3K7O43318 606 aa11.56□□□□□ -0.56
SMC4-214ENST00000472991 BCAR3O75815 825 aa11.56□□□□□ -0.56
SMC4-214ENST00000472991 NTSR2O95665 410 aa11.56□□□□□ -0.56
SMC4-214ENST00000472991 NUTM1Q86Y26 1132 aa11.56□□□□□ -0.56
SMC4-214ENST00000472991 BRPF1P55201 1214 aaPredicted RBP11.55□□□□□ -0.56
SMC4-214ENST00000472991 ST5P78524 1137 aa11.55□□□□□ -0.56
SMC4-214ENST00000472991 NEXNQ0ZGT2 675 aa11.55□□□□□ -0.56
SMC4-214ENST00000472991 CWF19L2Q2TBE0 894 aaKnown RBP11.55□□□□□ -0.56
SMC4-214ENST00000472991 PPP1R42Q7Z4L9 355 aa11.55□□□□□ -0.56
SMC4-214ENST00000472991 NLGN2Q8NFZ4 835 aa11.55□□□□□ -0.56
SMC4-214ENST00000472991 SYT17Q9BSW7 474 aa11.55□□□□□ -0.56
SMC4-214ENST00000472991 NYXQ9GZU5 481 aa11.55□□□□□ -0.56
SMC4-214ENST00000472991 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
SMC4-214ENST00000472991 CD2APQ9Y5K6 639 aa11.55□□□□□ -0.56
SMC4-214ENST00000472991 RIC1Q4ADV7 1423 aa11.54□□□□□ -0.56
SMC4-214ENST00000472991 SLX4Q8IY92 1834 aa11.54□□□□□ -0.56
SMC4-214ENST00000472991 IGKV5-2P06315 115 aa11.54□□□□□ -0.56
SMC4-214ENST00000472991 GTF2E1P29083 439 aaPredicted RBP11.54□□□□□ -0.56
SMC4-214ENST00000472991 ERFEQ4G0M1 354 aa11.54□□□□□ -0.56
SMC4-214ENST00000472991 TPTE2Q6XPS3 522 aa11.54□□□□□ -0.56
SMC4-214ENST00000472991 UTP14AQ9BVJ6 771 aaKnown RBP11.54□□□□□ -0.56
SMC4-214ENST00000472991 TRMT112Q9UI30 125 aaKnown RBP11.54□□□□□ -0.56
SMC4-214ENST00000472991 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
SMC4-214ENST00000472991 CCDC88AQ3V6T2 1871 aa11.53□□□□□ -0.56
SMC4-214ENST00000472991 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
SMC4-214ENST00000472991 TRIM28Q13263 835 aaKnown RBP11.53□□□□□ -0.56
SMC4-214ENST00000472991 SLC4A10Q6U841 1118 aa11.53□□□□□ -0.56
SMC4-214ENST00000472991 CCDC191Q8NCU4 936 aa11.53□□□□□ -0.56
SMC4-214ENST00000472991 ANKK1Q8NFD2 765 aa11.53□□□□□ -0.56
SMC4-214ENST00000472991 CWC25Q9NXE8 425 aaPredicted RBP11.53□□□□□ -0.56
SMC4-214ENST00000472991 RNF123Q5XPI4 1314 aa11.53□□□□□ -0.56
SMC4-214ENST00000472991 GRXCR2A6NFK2 248 aa11.52□□□□□ -0.57
SMC4-214ENST00000472991 CHRNA5P30532 468 aa11.52□□□□□ -0.57
SMC4-214ENST00000472991 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
SMC4-214ENST00000472991 BEND3Q5T5X7 828 aa11.52□□□□□ -0.57
SMC4-214ENST00000472991 SYNE4Q8N205 404 aa11.52□□□□□ -0.57
SMC4-214ENST00000472991 LINS1Q8NG48 757 aa11.52□□□□□ -0.57
SMC4-214ENST00000472991 FRAT1Q92837 279 aaPredicted RBP11.52□□□□□ -0.57
SMC4-214ENST00000472991 FAM89AQ96GI7 184 aa11.52□□□□□ -0.57
SMC4-214ENST00000472991 API5Q9BZZ5 524 aaKnown RBP11.52□□□□□ -0.57
SMC4-214ENST00000472991 SEPT9Q9UHD8 586 aaPredicted RBP11.52□□□□□ -0.57
SMC4-214ENST00000472991 RCAN3Q9UKA8 241 aa11.52□□□□□ -0.57
SMC4-214ENST00000472991 SH3TC1Q8TE82 1336 aa11.52□□□□□ -0.57
SMC4-214ENST00000472991 CHD4Q14839 1912 aa11.51□□□□□ -0.57
SMC4-214ENST00000472991 A0A0G2JLW4 131 aa11.51□□□□□ -0.57
SMC4-214ENST00000472991 DPEP1P16444 411 aa11.51□□□□□ -0.57
SMC4-214ENST00000472991 PDE6BP35913 854 aa11.51□□□□□ -0.57
SMC4-214ENST00000472991 TGFB2P61812 414 aa11.51□□□□□ -0.57
SMC4-214ENST00000472991 C2CD5Q86YS7 1000 aa11.51□□□□□ -0.57
SMC4-214ENST00000472991 JARID2Q92833 1246 aaPredicted RBP11.51□□□□□ -0.57
SMC4-214ENST00000472991 ZFRQ96KR1 1074 aaKnown RBP11.51□□□□□ -0.57
SMC4-214ENST00000472991 BRIP1Q9BX63 1249 aa11.51□□□□□ -0.57
SMC4-214ENST00000472991 WWC3Q9ULE0 1092 aa11.51□□□□□ -0.57
SMC4-214ENST00000472991 TNNQ9UQP3 1299 aa11.51□□□□□ -0.57
SMC4-214ENST00000472991 IPO8O15397 1037 aaKnown RBP11.5□□□□□ -0.57
SMC4-214ENST00000472991 ALDH1L1O75891 902 aa11.5□□□□□ -0.57
SMC4-214ENST00000472991 PCCAP05165 728 aaPredicted RBP11.5□□□□□ -0.57
SMC4-214ENST00000472991 HCLS1P14317 486 aaPredicted RBP11.5□□□□□ -0.57
SMC4-214ENST00000472991 TRIM27P14373 513 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms