RNA–Protein interactions for RNA: ENST00000472961.1

CFHR1-204, Transcript of complement factor H related 1, humanhuman

TSL 1 (best)

Gene CFHR1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-204ENST00000472961 ECE2O60344 883 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 GPSM2P81274 684 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 MKRN3Q13064 507 aaKnown RBP8.28□□□□□ -1.08
CFHR1-204ENST00000472961 GRAPQ13588 217 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 CNGB1Q14028 1251 aaPredicted RBP8.28□□□□□ -1.08
CFHR1-204ENST00000472961 TNIP1Q15025 636 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 KIF4BQ2VIQ3 1234 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 ANGEL2Q5VTE6 544 aaKnown RBP8.28□□□□□ -1.08
CFHR1-204ENST00000472961 NLRP10Q86W26 655 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 GRAPLQ8TC17 118 aaPredicted RBP8.28□□□□□ -1.08
CFHR1-204ENST00000472961 NLRP3Q96P20 1036 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 FZD1Q9UP38 647 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 MGAMO43451 1857 aa8.28□□□□□ -1.08
CFHR1-204ENST00000472961 EN2P19622 333 aaPredicted RBP8.27□□□□□ -1.09
CFHR1-204ENST00000472961 TM4SF4P48230 202 aa8.27□□□□□ -1.09
CFHR1-204ENST00000472961 TAF7Q15545 349 aaPredicted RBP8.27□□□□□ -1.09
CFHR1-204ENST00000472961 SUPT20HQ8NEM7 779 aa8.27□□□□□ -1.09
CFHR1-204ENST00000472961 GMLQ99445 158 aa8.27□□□□□ -1.09
CFHR1-204ENST00000472961 MUC3AQ02505 3323 aa8.26□□□□□ -1.09
CFHR1-204ENST00000472961 BBOX1O75936 387 aa8.26□□□□□ -1.09
CFHR1-204ENST00000472961 VIL1P09327 827 aaKnown RBP8.26□□□□□ -1.09
CFHR1-204ENST00000472961 ZNF280AP59817 542 aaPredicted RBP8.26□□□□□ -1.09
CFHR1-204ENST00000472961 SCARF1Q14162 830 aa8.26□□□□□ -1.09
CFHR1-204ENST00000472961 NOM1Q5C9Z4 860 aaKnown RBP8.26□□□□□ -1.09
CFHR1-204ENST00000472961 KIF6Q6ZMV9 814 aa8.26□□□□□ -1.09
CFHR1-204ENST00000472961 DCPSQ96C86 337 aaKnown RBP8.26□□□□□ -1.09
CFHR1-204ENST00000472961 GCC1Q96CN9 775 aa8.26□□□□□ -1.09
CFHR1-204ENST00000472961 OTUD5Q96G74 571 aa8.26□□□□□ -1.09
CFHR1-204ENST00000472961 UTP14AQ9BVJ6 771 aaKnown RBP8.26□□□□□ -1.09
CFHR1-204ENST00000472961 CFHR5Q9BXR6 569 aa8.26□□□□□ -1.09
CFHR1-204ENST00000472961 ARAP2Q8WZ64 1704 aa8.26□□□□□ -1.09
CFHR1-204ENST00000472961 PKN2Q16513 984 aaKnown RBP8.25□□□□□ -1.09
CFHR1-204ENST00000472961 WASHC4Q2M389 1173 aa8.25□□□□□ -1.09
CFHR1-204ENST00000472961 NBPF9Q3BBW0 867 aa8.25□□□□□ -1.09
CFHR1-204ENST00000472961 OTOP1Q7RTM1 612 aa8.25□□□□□ -1.09
CFHR1-204ENST00000472961 TBC1D16Q8TBP0 767 aa8.25□□□□□ -1.09
CFHR1-204ENST00000472961 MXD3Q9BW11 206 aa8.25□□□□□ -1.09
CFHR1-204ENST00000472961 CDH23Q9H251 3354 aa8.24□□□□□ -1.09
CFHR1-204ENST00000472961 RPS12P25398 132 aaKnown RBP8.24□□□□□ -1.09
CFHR1-204ENST00000472961 PTPN12Q05209 780 aaKnown RBP8.24□□□□□ -1.09
CFHR1-204ENST00000472961 PARP10Q53GL7 1025 aa8.24□□□□□ -1.09
CFHR1-204ENST00000472961 PPP1R42Q7Z4L9 355 aa8.24□□□□□ -1.09
CFHR1-204ENST00000472961 SULF1Q8IWU6 871 aa8.24□□□□□ -1.09
CFHR1-204ENST00000472961 PLEKHF1Q96S99 279 aa8.24□□□□□ -1.09
CFHR1-204ENST00000472961 HDAC9Q9UKV0 1011 aa8.24□□□□□ -1.09
CFHR1-204ENST00000472961 NSFL1CQ9UNZ2 370 aaKnown RBP8.24□□□□□ -1.09
CFHR1-204ENST00000472961 AOX1Q06278 1338 aa8.24□□□□□ -1.09
CFHR1-204ENST00000472961 IGF2BP3O00425 579 aaKnown RBP eCLIP8.23□□□□□ -1.09
CFHR1-204ENST00000472961 HTATSF1O43719 755 aaKnown RBP8.23□□□□□ -1.09
CFHR1-204ENST00000472961 FKTNO75072 461 aa8.23□□□□□ -1.09
CFHR1-204ENST00000472961 KRT24Q2M2I5 525 aa8.23□□□□□ -1.09
CFHR1-204ENST00000472961 TIMELESSQ9UNS1 1208 aa8.23□□□□□ -1.09
CFHR1-204ENST00000472961 U2AF1L5P0DN76 240 aaPredicted RBP8.22□□□□□ -1.09
CFHR1-204ENST00000472961 GJA5P36382 358 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 U2AF1Q01081 240 aaKnown RBP eCLIP8.22□□□□□ -1.09
CFHR1-204ENST00000472961 RSBN1LQ6PCB5 846 aaPredicted RBP8.22□□□□□ -1.09
CFHR1-204ENST00000472961 DDX46Q7L014 1031 aaKnown RBP8.22□□□□□ -1.09
CFHR1-204ENST00000472961 COPS6Q7L5N1 327 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 XAGE3Q8WTP9 111 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 NECTIN2Q92692 538 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 ARMC5Q96C12 935 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 FAM89AQ96GI7 184 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 PRO3102Q9H379 93 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 MYOZ2Q9NPC6 264 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 SEC31BQ9NQW1 1179 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 TRIM17Q9Y577 477 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 ERBB4Q15303 1308 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 PITPNM2Q9BZ72 1349 aa8.22□□□□□ -1.09
CFHR1-204ENST00000472961 DOCK3Q8IZD9 2030 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 H0YGN5 161 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 PPP2R1AP30153 589 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 FKBP1BP68106 108 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 TCIRG1Q13488 830 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 SF3B3Q15393 1217 aaKnown RBP8.21□□□□□ -1.1
CFHR1-204ENST00000472961 LDLRAD1Q5T700 205 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 SPRYD7Q5W111 196 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 REM2Q8IYK8 340 aaPredicted RBP8.21□□□□□ -1.1
CFHR1-204ENST00000472961 CD99L2Q8TCZ2 262 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 RTF1Q92541 710 aaKnown RBP8.21□□□□□ -1.1
CFHR1-204ENST00000472961 CLMNQ96JQ2 1002 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 ISCA1Q9BUE6 129 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 TRMT112Q9UI30 125 aaKnown RBP8.21□□□□□ -1.1
CFHR1-204ENST00000472961 PTPN22Q9Y2R2 807 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 PCDHAC2Q9Y5I4 1007 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 SH3TC1Q8TE82 1336 aa8.21□□□□□ -1.1
CFHR1-204ENST00000472961 REV3LO60673 3130 aa8.2□□□□□ -1.1
CFHR1-204ENST00000472961 DLL1O00548 723 aa8.2□□□□□ -1.1
CFHR1-204ENST00000472961 SOX1O00570 391 aaPredicted RBP8.2□□□□□ -1.1
CFHR1-204ENST00000472961 WNT10BO00744 389 aa8.2□□□□□ -1.1
CFHR1-204ENST00000472961 SASH1O94885 1247 aa8.2□□□□□ -1.1
CFHR1-204ENST00000472961 EIF2S2P20042 333 aaKnown RBP8.2□□□□□ -1.1
CFHR1-204ENST00000472961 AIMP1Q12904 312 aaKnown RBP8.2□□□□□ -1.1
CFHR1-204ENST00000472961 PRKG1Q13976 671 aa8.2□□□□□ -1.1
CFHR1-204ENST00000472961 RTL5Q5HYW3 569 aaPredicted RBP8.2□□□□□ -1.1
CFHR1-204ENST00000472961 SHISA4Q96DD7 197 aa8.2□□□□□ -1.1
CFHR1-204ENST00000472961 ZBED3Q96IU2 234 aaPredicted RBP8.2□□□□□ -1.1
CFHR1-204ENST00000472961 ZNF333Q96JL9 665 aa8.2□□□□□ -1.1
CFHR1-204ENST00000472961 PTPN18Q99952 460 aa8.2□□□□□ -1.1
CFHR1-204ENST00000472961 PODXL2Q9NZ53 605 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms