RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 SAMD7Q7Z3H4 446 aa18.34■□□□□ 0.53
ABCF3-209ENST00000472608 REM2Q8IYK8 340 aaPredicted RBP18.34■□□□□ 0.53
ABCF3-209ENST00000472608 TSPYL6Q8N831 410 aa18.34■□□□□ 0.53
ABCF3-209ENST00000472608 UTP14AQ9BVJ6 771 aaKnown RBP18.34■□□□□ 0.53
ABCF3-209ENST00000472608 ELL2O00472 640 aaPredicted RBP18.33■□□□□ 0.52
ABCF3-209ENST00000472608 HYPKQ9NX55 129 aa18.33■□□□□ 0.52
ABCF3-209ENST00000472608 HPS5Q9UPZ3 1129 aa18.33■□□□□ 0.52
ABCF3-209ENST00000472608 ZBTB12Q9Y330 459 aaPredicted RBP18.33■□□□□ 0.52
ABCF3-209ENST00000472608 AKAP11Q9UKA4 1901 aa18.32■□□□□ 0.52
ABCF3-209ENST00000472608 EGFRP00533 1210 aa18.32■□□□□ 0.52
ABCF3-209ENST00000472608 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
ABCF3-209ENST00000472608 PKN2Q16513 984 aaKnown RBP18.32■□□□□ 0.52
ABCF3-209ENST00000472608 NECTIN2Q92692 538 aa18.32■□□□□ 0.52
ABCF3-209ENST00000472608 CHPF2Q9P2E5 772 aa18.32■□□□□ 0.52
ABCF3-209ENST00000472608 DUOX1Q9NRD9 1551 aa18.32■□□□□ 0.52
ABCF3-209ENST00000472608 PSMD14O00487 310 aa18.31■□□□□ 0.52
ABCF3-209ENST00000472608 RPS12P25398 132 aaKnown RBP18.31■□□□□ 0.52
ABCF3-209ENST00000472608 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
ABCF3-209ENST00000472608 GRAPQ13588 217 aa18.31■□□□□ 0.52
ABCF3-209ENST00000472608 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
ABCF3-209ENST00000472608 TBC1D10BQ4KMP7 808 aaPredicted RBP18.31■□□□□ 0.52
ABCF3-209ENST00000472608 TMC4Q7Z404 712 aa18.31■□□□□ 0.52
ABCF3-209ENST00000472608 TRMT2AQ8IZ69 625 aaKnown RBP18.31■□□□□ 0.52
ABCF3-209ENST00000472608 GRAPLQ8TC17 118 aaPredicted RBP18.31■□□□□ 0.52
ABCF3-209ENST00000472608 POLR2AP24928 1970 aaKnown RBP18.31■□□□□ 0.52
ABCF3-209ENST00000472608 ADM5C9JUS6 153 aa18.3■□□□□ 0.52
ABCF3-209ENST00000472608 VAMP4O75379 141 aa18.3■□□□□ 0.52
ABCF3-209ENST00000472608 COPS6Q7L5N1 327 aa18.3■□□□□ 0.52
ABCF3-209ENST00000472608 DCPSQ96C86 337 aaKnown RBP18.3■□□□□ 0.52
ABCF3-209ENST00000472608 ANKRD36CQ5JPF3 1778 aa18.3■□□□□ 0.52
ABCF3-209ENST00000472608 ANXA1P04083 346 aa18.29■□□□□ 0.52
ABCF3-209ENST00000472608 DDX46Q7L014 1031 aaKnown RBP18.29■□□□□ 0.52
ABCF3-209ENST00000472608 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
ABCF3-209ENST00000472608 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
ABCF3-209ENST00000472608 XAGE3Q8WTP9 111 aa18.28■□□□□ 0.52
ABCF3-209ENST00000472608 HCLS1P14317 486 aaPredicted RBP18.27■□□□□ 0.52
ABCF3-209ENST00000472608 WASHC4Q2M389 1173 aa18.27■□□□□ 0.52
ABCF3-209ENST00000472608 NLRP10Q86W26 655 aa18.27■□□□□ 0.52
ABCF3-209ENST00000472608 RASAL3Q86YV0 1011 aa18.27■□□□□ 0.52
ABCF3-209ENST00000472608 STK31Q9BXU1 1019 aa18.27■□□□□ 0.52
ABCF3-209ENST00000472608 LAMB2P55268 1798 aa18.27■□□□□ 0.51
ABCF3-209ENST00000472608 LRRC37AA6NMS7 1700 aa18.26■□□□□ 0.51
ABCF3-209ENST00000472608 NOM1Q5C9Z4 860 aaKnown RBP18.26■□□□□ 0.51
ABCF3-209ENST00000472608 ANKRD13DQ6ZTN6 518 aa18.26■□□□□ 0.51
ABCF3-209ENST00000472608 ZNF428Q96B54 188 aa18.26■□□□□ 0.51
ABCF3-209ENST00000472608 CDCA7LQ96GN5 454 aa18.26■□□□□ 0.51
ABCF3-209ENST00000472608 CACNA1FO60840 1977 aa18.25■□□□□ 0.51
ABCF3-209ENST00000472608 FKBP1BP68106 108 aa18.25■□□□□ 0.51
ABCF3-209ENST00000472608 AIMP1Q12904 312 aaKnown RBP18.25■□□□□ 0.51
ABCF3-209ENST00000472608 HSP90AB3PQ58FF7 597 aa18.25■□□□□ 0.51
ABCF3-209ENST00000472608 SULF1Q8IWU6 871 aa18.25■□□□□ 0.51
ABCF3-209ENST00000472608 PLBD2Q8NHP8 589 aa18.25■□□□□ 0.51
ABCF3-209ENST00000472608 DBNDD1Q9H9R9 158 aa18.25■□□□□ 0.51
ABCF3-209ENST00000472608 RTL9Q8NET4 1388 aa18.25■□□□□ 0.51
ABCF3-209ENST00000472608 VIL1P09327 827 aaKnown RBP18.24■□□□□ 0.51
ABCF3-209ENST00000472608 CT47B1P0C2W7 299 aaPredicted RBP18.24■□□□□ 0.51
ABCF3-209ENST00000472608 KIF4BQ2VIQ3 1234 aa18.24■□□□□ 0.51
ABCF3-209ENST00000472608 ZNF296Q8WUU4 475 aaPredicted RBP18.24■□□□□ 0.51
ABCF3-209ENST00000472608 CDCA5Q96FF9 252 aa18.24■□□□□ 0.51
ABCF3-209ENST00000472608 KCNQ5Q9NR82 932 aa18.24■□□□□ 0.51
ABCF3-209ENST00000472608 GGA3Q9NZ52 723 aa18.24■□□□□ 0.51
ABCF3-209ENST00000472608 MKI67P46013 3256 aaKnown RBP18.24■□□□□ 0.51
ABCF3-209ENST00000472608 ZBED9Q6R2W3 1325 aa18.23■□□□□ 0.51
ABCF3-209ENST00000472608 DDX58O95786 925 aaKnown RBP18.23■□□□□ 0.51
ABCF3-209ENST00000472608 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
ABCF3-209ENST00000472608 RBM26Q5T8P6 1007 aaKnown RBP18.23■□□□□ 0.51
ABCF3-209ENST00000472608 PHAXQ9H814 394 aaKnown RBP18.23■□□□□ 0.51
ABCF3-209ENST00000472608 POLLQ9UGP5 575 aa18.23■□□□□ 0.51
ABCF3-209ENST00000472608 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
ABCF3-209ENST00000472608 ECE2O60344 883 aa18.22■□□□□ 0.51
ABCF3-209ENST00000472608 TCIRG1Q13488 830 aa18.22■□□□□ 0.51
ABCF3-209ENST00000472608 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
ABCF3-209ENST00000472608 HDAC9Q9UKV0 1011 aa18.22■□□□□ 0.51
ABCF3-209ENST00000472608 ZNF609O15014 1411 aa18.22■□□□□ 0.51
ABCF3-209ENST00000472608 ASTN2O75129 1339 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-209ENST00000472608 ZNF280AP59817 542 aaPredicted RBP18.21■□□□□ 0.51
ABCF3-209ENST00000472608 HABP4Q5JVS0 413 aaKnown RBP18.21■□□□□ 0.51
ABCF3-209ENST00000472608 FBXO46Q6PJ61 603 aaPredicted RBP18.21■□□□□ 0.51
ABCF3-209ENST00000472608 NSFL1CQ9UNZ2 370 aaKnown RBP18.21■□□□□ 0.51
ABCF3-209ENST00000472608 TAF1P21675 1872 aa18.2■□□□□ 0.5
ABCF3-209ENST00000472608 RIMBP2O15034 1052 aa18.2■□□□□ 0.5
ABCF3-209ENST00000472608 TM4SF4P48230 202 aa18.2■□□□□ 0.5
ABCF3-209ENST00000472608 TRIM28Q13263 835 aaKnown RBP18.2■□□□□ 0.5
ABCF3-209ENST00000472608 SF3B3Q15393 1217 aaKnown RBP18.2■□□□□ 0.5
ABCF3-209ENST00000472608 CELF1Q92879 486 aaKnown RBP18.2■□□□□ 0.5
ABCF3-209ENST00000472608 EYA3Q99504 573 aa18.2■□□□□ 0.5
ABCF3-209ENST00000472608 CFHR5Q9BXR6 569 aa18.2■□□□□ 0.5
ABCF3-209ENST00000472608 PAPPA2Q9BXP8 1791 aa18.19■□□□□ 0.5
ABCF3-209ENST00000472608 GPR25O00155 361 aa18.19■□□□□ 0.5
ABCF3-209ENST00000472608 TBC1D8O95759 1140 aa18.19■□□□□ 0.5
ABCF3-209ENST00000472608 GPSM2P81274 684 aa18.19■□□□□ 0.5
ABCF3-209ENST00000472608 RIC3Q7Z5B4 369 aa18.19■□□□□ 0.5
ABCF3-209ENST00000472608 PITPNM2Q9BZ72 1349 aa18.19■□□□□ 0.5
ABCF3-209ENST00000472608 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
ABCF3-209ENST00000472608 FLIIQ13045 1269 aa18.18■□□□□ 0.5
ABCF3-209ENST00000472608 DOK7Q18PE1 504 aa18.18■□□□□ 0.5
ABCF3-209ENST00000472608 ALDH1L2Q3SY69 923 aa18.18■□□□□ 0.5
ABCF3-209ENST00000472608 ANGEL2Q5VTE6 544 aaKnown RBP18.18■□□□□ 0.5
ABCF3-209ENST00000472608 KSR2Q6VAB6 950 aa18.18■□□□□ 0.5
ABCF3-209ENST00000472608 TBC1D16Q8TBP0 767 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms