RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 ZBTB1Q9Y2K1 713 aa15.73■□□□□ 0.11
SCAMP4-207ENST00000472442 SLIT2O94813 1529 aa15.73■□□□□ 0.11
SCAMP4-207ENST00000472442 MARCH10Q8NA82 808 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-207ENST00000472442 KIF6Q6ZMV9 814 aa15.72■□□□□ 0.11
SCAMP4-207ENST00000472442 PYCARDQ9ULZ3 195 aa15.72■□□□□ 0.11
SCAMP4-207ENST00000472442 MAP3K15Q6ZN16 1313 aa15.72■□□□□ 0.11
SCAMP4-207ENST00000472442 KCNF1Q9H3M0 494 aa15.72■□□□□ 0.11
SCAMP4-207ENST00000472442 DIAPH3Q9NSV4 1193 aa15.72■□□□□ 0.11
SCAMP4-207ENST00000472442 RIOK3O14730 519 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-207ENST00000472442 AP5Z1O43299 807 aa15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 LETM1O95202 739 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 GIGYF2Q6Y7W6 1299 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 KIAA1524Q8TCG1 905 aa15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 ZNF594Q96JF6 807 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 TCHHQ07283 1943 aa15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 FIBPO43427 364 aa15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 UBE2HP62256 183 aa15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 GIMAP6Q6P9H5 292 aa15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 FAM89AQ96GI7 184 aa15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 ACSBG1Q96GR2 724 aa15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 DBNDD2Q9BQY9 259 aa15.71■□□□□ 0.11
SCAMP4-207ENST00000472442 PTH1RQ03431 593 aa15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 CHAF1AQ13111 956 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 LRRC24Q50LG9 513 aa15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 EDC3Q96F86 508 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 FAM227BQ96M60 508 aa15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 ATP5JP18859 108 aa15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 U2AF2P26368 475 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 RASEFQ8IZ41 740 aa15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 SYNE4Q8N205 404 aa15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 SPC24Q8NBT2 197 aa15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 NWD2Q9ULI1 1742 aa15.7■□□□□ 0.1
SCAMP4-207ENST00000472442 ZSCAN22P10073 491 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 PCCAP05165 728 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 BARGINQ6ZT62 677 aa15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 RUFY2Q8WXA3 655 aa15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 SNX14Q9Y5W7 946 aa15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 NDUFB9Q9Y6M9 179 aa15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 NMIQ13287 307 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 ZBTB38Q8NAP3 1195 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 LARP6Q9BRS8 491 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 FUCA2Q9BTY2 467 aa15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 PUS3Q9BZE2 481 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-207ENST00000472442 KIF20AO95235 890 aa15.68■□□□□ 0.1
SCAMP4-207ENST00000472442 GPTP24298 496 aa15.68■□□□□ 0.1
SCAMP4-207ENST00000472442 NLRP10Q86W26 655 aa15.68■□□□□ 0.1
SCAMP4-207ENST00000472442 CCDC9Q9Y3X0 531 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-207ENST00000472442 EYA2O00167 538 aa15.68■□□□□ 0.1
SCAMP4-207ENST00000472442 ANKRD7Q92527 254 aa15.68■□□□□ 0.1
SCAMP4-207ENST00000472442 A0A0D9SFI3 127 aa15.67■□□□□ 0.1
SCAMP4-207ENST00000472442 STX6O43752 255 aa15.67■□□□□ 0.1
SCAMP4-207ENST00000472442 IL15P40933 162 aaPredicted RBP15.67■□□□□ 0.1
SCAMP4-207ENST00000472442 FSD1Q9BTV5 496 aa15.67■□□□□ 0.1
SCAMP4-207ENST00000472442 PLA2G12BQ9BX93 195 aa15.67■□□□□ 0.1
SCAMP4-207ENST00000472442 SNRKQ9NRH2 765 aa15.67■□□□□ 0.1
SCAMP4-207ENST00000472442 SYT1P21579 422 aa15.67■□□□□ 0.1
SCAMP4-207ENST00000472442 IL6STP40189 918 aaPredicted RBP15.67■□□□□ 0.1
SCAMP4-207ENST00000472442 TIMM10P62072 90 aa15.67■□□□□ 0.1
SCAMP4-207ENST00000472442 TBC1D2BQ9UPU7 963 aa15.67■□□□□ 0.1
SCAMP4-207ENST00000472442 IGSF3O75054 1194 aa15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 CSF1RP07333 972 aa15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 A0A0G2JS52 829 aa15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 UBAP1LF5GYI3 381 aa15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 F13A1P00488 732 aa15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 INTS5Q6P9B9 1019 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 GPR108Q9NPR9 543 aa15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 HIP1O00291 1037 aa15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 DTNBO60941 627 aa15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 CIAO1O76071 339 aa15.66■□□□□ 0.1
SCAMP4-207ENST00000472442 CHGBP05060 677 aa15.65■□□□□ 0.1
SCAMP4-207ENST00000472442 DZIP3Q86Y13 1208 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-207ENST00000472442 CCDC171Q6TFL3 1326 aa15.65■□□□□ 0.1
SCAMP4-207ENST00000472442 BCL9LQ86UU0 1499 aa15.65■□□□□ 0.1
SCAMP4-207ENST00000472442 NUP98P52948 1817 aa15.65■□□□□ 0.1
SCAMP4-207ENST00000472442 KCNQ2O43526 872 aa15.65■□□□□ 0.1
SCAMP4-207ENST00000472442 NECTIN1Q15223 517 aa15.65■□□□□ 0.1
SCAMP4-207ENST00000472442 CCDC57Q2TAC2 916 aa15.65■□□□□ 0.1
SCAMP4-207ENST00000472442 NEUROD6Q96NK8 337 aa15.65■□□□□ 0.1
SCAMP4-207ENST00000472442 HAUS7Q99871 368 aa15.65■□□□□ 0.1
SCAMP4-207ENST00000472442 LOC102724428A0A0B4J2F2 783 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 CTIFO43310 598 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 ATP6V1AP38606 617 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 AK2P54819 239 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 EIF5P55010 431 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 SIK1P57059 783 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 ITPK1Q13572 414 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 KCNB2Q92953 911 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 CDHR2Q9BYE9 1310 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 MED23Q9ULK4 1368 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 ANKRD36CQ5JPF3 1778 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 ERVV-1B6SEH8 477 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 TPM3P06753 285 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 FAM98CQ17RN3 349 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 HSP90AB3PQ58FF7 597 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 ZNF589Q86UQ0 364 aaPredicted RBP15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 MAP4K1Q92918 833 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 TTC14Q96N46 770 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 DNAJC2Q99543 621 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 SMC3Q9UQE7 1217 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms