RNA–Protein interactions for RNA: ENST00000472411.1

TMEM9-208, Transcript of transmembrane protein 9, human

TSL 2

Gene TMEM9, Length 2,892 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM9-208	ENST00000472411	DNAJC2	Q99543	621 aa	Known RBP	12.52	□□□□□ -0.41
TMEM9-208	ENST00000472411		U3KPZ7	1027 aa	Predicted RBP	12.52	□□□□□ -0.41
TMEM9-208	ENST00000472411	U2AF2	P26368	475 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
TMEM9-208	ENST00000472411	MCMDC2	Q4G0Z9	681 aa		12.51	□□□□□ -0.41
TMEM9-208	ENST00000472411	SMARCC2	Q8TAQ2	1214 aa		12.51	□□□□□ -0.41
TMEM9-208	ENST00000472411	DBNDD2	Q9BQY9	259 aa		12.51	□□□□□ -0.41
TMEM9-208	ENST00000472411	CAVIN2	O95810	425 aa		12.51	□□□□□ -0.41
TMEM9-208	ENST00000472411	LMOD2	Q6P5Q4	547 aa		12.51	□□□□□ -0.41
TMEM9-208	ENST00000472411	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12.51	□□□□□ -0.41
TMEM9-208	ENST00000472411	STOX1	Q6ZVD7	989 aa		12.51	□□□□□ -0.41
TMEM9-208	ENST00000472411	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
TMEM9-208	ENST00000472411	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.51	□□□□□ -0.41
TMEM9-208	ENST00000472411	MRC1	P22897	1456 aa		12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	FOSB	P53539	338 aa		12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	DDX46	Q7L014	1031 aa	Known RBP	12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	RCOR1	Q9UKL0	485 aa		12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	LAMA4	Q16363	1823 aa		12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	SMTNL1	A8MU46	457 aa		12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	PIP4K2A	P48426	406 aa	Predicted RBP	12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	FGD1	P98174	961 aa		12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	NCBP1	Q09161	790 aa	Known RBP	12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	UTP14C	Q5TAP6	766 aa	Known RBP	12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	ANKRD13D	Q6ZTN6	518 aa		12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	CCAR1	Q8IX12	1150 aa	Known RBP	12.5	□□□□□ -0.41
TMEM9-208	ENST00000472411	GOLGA6L19	H0YKK7	550 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	PFKFB2	O60825	505 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	CTDNEP1	O95476	244 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	CDC25B	P30305	580 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	ARID5B	Q14865	1188 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	TPD52L1	Q16890	204 aa	Predicted RBP	12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	LRRC8A	Q8IWT6	810 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	NFATC2IP	Q8NCF5	419 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	NSUN7	Q8NE18	718 aa	Known RBP	12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	HAUS7	Q99871	368 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	SNW1	Q13573	536 aa	Known RBP	12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	NAA30	Q147X3	362 aa	Predicted RBP	12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	SLFNL1	Q499Z3	407 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	UBE3B	Q7Z3V4	1068 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	ORAI2	Q96SN7	254 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	LLPH	Q9BRT6	129 aa	Known RBP	12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	GOLPH3L	Q9H4A5	285 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	CCDC9	Q9Y3X0	531 aa	Known RBP	12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	USP16	Q9Y5T5	823 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411	MYH15	Q9Y2K3	1946 aa		12.49	□□□□□ -0.41
TMEM9-208	ENST00000472411		A0A087WWV3	80 aa		12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	APOBR	Q0VD83	1088 aa		12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	SARM1	Q6SZW1	724 aa		12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	DHX32	Q7L7V1	743 aa	Known RBP	12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	USP28	Q96RU2	1077 aa		12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	CCT2	P78371	535 aa	Known RBP	12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	NAA16	Q6N069	864 aa	Predicted RBP	12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	LRP10	Q7Z4F1	713 aa		12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	ZNF496	Q96IT1	587 aa	Predicted RBP	12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	SLC52A2	Q9HAB3	445 aa		12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	PAXBP1	Q9Y5B6	917 aa		12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	CTAGE5	O15320	804 aa		12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	PPFIA3	O75145	1194 aa		12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	RABL6	Q3YEC7	729 aa	Predicted RBP	12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	MRFAP1L1	Q96HT8	127 aa		12.48	□□□□□ -0.41
TMEM9-208	ENST00000472411	C5	P01031	1676 aa		12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	ATP5J2-PTCD1	G3V325	749 aa		12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	PTCD1	O75127	700 aa	Known RBP	12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	SYCP1	Q15431	976 aa		12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	STX1A	Q16623	288 aa		12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	KBTBD3	Q8NAB2	608 aa		12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	CCDC112	Q8NEF3	446 aa		12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	ENGASE	Q8NFI3	743 aa		12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	RGPD5	Q99666	1765 aa		12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	PTPDC1	A2A3K4	754 aa		12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	USP27X	A6NNY8	438 aa		12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	HMGB1	P09429	215 aa	Known RBP	12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	EXOSC10	Q01780	885 aa	Known RBP	12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	NCOA5	Q9HCD5	579 aa	Known RBP	12.47	□□□□□ -0.41
TMEM9-208	ENST00000472411	RFX7	Q2KHR2	1363 aa		12.46	□□□□□ -0.41
TMEM9-208	ENST00000472411		A0A087WZG4	1122 aa		12.46	□□□□□ -0.41
TMEM9-208	ENST00000472411		A0A0G2JLW4	131 aa		12.46	□□□□□ -0.41
TMEM9-208	ENST00000472411	BECN2	A8MW95	431 aa		12.46	□□□□□ -0.41
TMEM9-208	ENST00000472411	RBM6	P78332	1123 aa	Known RBP	12.46	□□□□□ -0.41
TMEM9-208	ENST00000472411	GUCY1B3	Q02153	619 aa		12.46	□□□□□ -0.41
TMEM9-208	ENST00000472411	ZNF592	Q92610	1267 aa		12.46	□□□□□ -0.41
TMEM9-208	ENST00000472411	FER1L4	A9Z1Z3	1794 aa		12.46	□□□□□ -0.42
TMEM9-208	ENST00000472411	CEP135	Q66GS9	1140 aa		12.46	□□□□□ -0.42
TMEM9-208	ENST00000472411	CCDC73	Q6ZRK6	1079 aa		12.46	□□□□□ -0.42
TMEM9-208	ENST00000472411	DHX40	Q8IX18	779 aa	Known RBP	12.46	□□□□□ -0.42
TMEM9-208	ENST00000472411	ERCC4	Q92889	916 aa	Predicted RBP	12.46	□□□□□ -0.42
TMEM9-208	ENST00000472411	GTPBP4	Q9BZE4	634 aa	Known RBP	12.46	□□□□□ -0.42
TMEM9-208	ENST00000472411	ADAMTS7	Q9UKP4	1686 aa		12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	KIN	O60870	393 aa	Known RBP	12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	SKIL	P12757	684 aa		12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	FEZ1	Q99689	392 aa		12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	AGXT2	Q9BYV1	514 aa		12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	SH3TC1	Q8TE82	1336 aa		12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	AFDN	P55196	1824 aa	Known RBP	12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	GOLIM4	O00461	696 aa		12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	FAM160A1	Q05DH4	1040 aa		12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	LMBR1L	Q6UX01	489 aa		12.45	□□□□□ -0.42
TMEM9-208	ENST00000472411	CHST3	Q7LGC8	479 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms