RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 SCARF2Q96GP6 870 aaPredicted RBP12.54□□□□□ -0.4
SGCE-210ENST00000472326 TNFRSF21O75509 655 aa12.53□□□□□ -0.4
SGCE-210ENST00000472326 EHHADHQ08426 723 aa12.53□□□□□ -0.4
SGCE-210ENST00000472326 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
SGCE-210ENST00000472326 LPIN3Q9BQK8 851 aa12.53□□□□□ -0.4
SGCE-210ENST00000472326 JPH1Q9HDC5 661 aaPredicted RBP12.53□□□□□ -0.4
SGCE-210ENST00000472326 MKL2Q9ULH7 1088 aa12.53□□□□□ -0.4
SGCE-210ENST00000472326 PHF20L1A8MW92 1017 aa12.52□□□□□ -0.41
SGCE-210ENST00000472326 HOXD8P13378 290 aaPredicted RBP12.52□□□□□ -0.41
SGCE-210ENST00000472326 ELMSAN1Q6PJG2 1045 aa12.52□□□□□ -0.41
SGCE-210ENST00000472326 CHRDQ9H2X0 955 aa12.52□□□□□ -0.41
SGCE-210ENST00000472326 CES1P23141 567 aa12.51□□□□□ -0.41
SGCE-210ENST00000472326 HYAL2Q12891 473 aa12.51□□□□□ -0.41
SGCE-210ENST00000472326 PHACTR2O75167 634 aa12.5□□□□□ -0.41
SGCE-210ENST00000472326 RGS9O75916 674 aaPredicted RBP12.5□□□□□ -0.41
SGCE-210ENST00000472326 IRS1P35568 1242 aa12.5□□□□□ -0.41
SGCE-210ENST00000472326 FAM129BQ96TA1 746 aa12.5□□□□□ -0.41
SGCE-210ENST00000472326 SMG9Q9H0W8 520 aaKnown RBP12.5□□□□□ -0.41
SGCE-210ENST00000472326 SUV39H2Q9H5I1 410 aa12.5□□□□□ -0.41
SGCE-210ENST00000472326 DCTN4Q9UJW0 460 aa12.5□□□□□ -0.41
SGCE-210ENST00000472326 LILRB5O75023 590 aa12.49□□□□□ -0.41
SGCE-210ENST00000472326 GHRHP01286 108 aa12.49□□□□□ -0.41
SGCE-210ENST00000472326 MAPK1P28482 360 aa12.49□□□□□ -0.41
SGCE-210ENST00000472326 NCAPG2Q86XI2 1143 aa12.49□□□□□ -0.41
SGCE-210ENST00000472326 SNX29Q8TEQ0 813 aa12.49□□□□□ -0.41
SGCE-210ENST00000472326 TRIM11Q96F44 468 aa12.49□□□□□ -0.41
SGCE-210ENST00000472326 EREGO14944 169 aa12.48□□□□□ -0.41
SGCE-210ENST00000472326 GPR182O15218 404 aa12.48□□□□□ -0.41
SGCE-210ENST00000472326 COL9A3Q14050 684 aaPredicted RBP12.48□□□□□ -0.41
SGCE-210ENST00000472326 PLD4Q96BZ4 506 aa12.48□□□□□ -0.41
SGCE-210ENST00000472326 GNB5O14775 395 aa12.47□□□□□ -0.41
SGCE-210ENST00000472326 KIF4AO95239 1232 aa12.47□□□□□ -0.41
SGCE-210ENST00000472326 IGHA2P01877 340 aa12.47□□□□□ -0.41
SGCE-210ENST00000472326 ACPPP15309 386 aa12.47□□□□□ -0.41
SGCE-210ENST00000472326 AFF1P51825 1210 aaKnown RBP12.47□□□□□ -0.41
SGCE-210ENST00000472326 ATP11AP98196 1134 aa12.47□□□□□ -0.41
SGCE-210ENST00000472326 PDE3BQ13370 1112 aa12.47□□□□□ -0.41
SGCE-210ENST00000472326 TMC7Q7Z402 723 aa12.47□□□□□ -0.41
SGCE-210ENST00000472326 RBCK1Q9BYM8 510 aa12.47□□□□□ -0.41
SGCE-210ENST00000472326 FRRS1LQ9P0K9 344 aa12.47□□□□□ -0.41
SGCE-210ENST00000472326 NID1P14543 1247 aa12.46□□□□□ -0.41
SGCE-210ENST00000472326 ORC1Q13415 861 aa12.46□□□□□ -0.41
SGCE-210ENST00000472326 SPACA7Q96KW9 195 aa12.46□□□□□ -0.41
SGCE-210ENST00000472326 CITED4Q96RK1 184 aa12.46□□□□□ -0.41
SGCE-210ENST00000472326 NIF3L1Q9GZT8 377 aa12.46□□□□□ -0.41
SGCE-210ENST00000472326 POLR3DP05423 398 aaPredicted RBP12.45□□□□□ -0.42
SGCE-210ENST00000472326 PLVAPQ9BX97 442 aa12.45□□□□□ -0.42
SGCE-210ENST00000472326 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
SGCE-210ENST00000472326 PRDM6Q9NQX0 595 aa12.45□□□□□ -0.42
SGCE-210ENST00000472326 SALL4Q9UJQ4 1053 aa12.45□□□□□ -0.42
SGCE-210ENST00000472326 RNF225M0QZC1 329 aaPredicted RBP12.44□□□□□ -0.42
SGCE-210ENST00000472326 GRIK5Q16478 980 aa12.44□□□□□ -0.42
SGCE-210ENST00000472326 USPL1Q5W0Q7 1092 aa12.44□□□□□ -0.42
SGCE-210ENST00000472326 RASSF4Q9H2L5 321 aa12.44□□□□□ -0.42
SGCE-210ENST00000472326 ZFYVE28Q9HCC9 887 aa12.44□□□□□ -0.42
SGCE-210ENST00000472326 TRPA1O75762 1119 aa12.43□□□□□ -0.42
SGCE-210ENST00000472326 GSK3AP49840 483 aa12.43□□□□□ -0.42
SGCE-210ENST00000472326 SND1Q7KZF4 910 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■□□□□ 9
SGCE-210ENST00000472326 CEP120Q8N960 986 aa12.43□□□□□ -0.42
SGCE-210ENST00000472326 COL8A1P27658 744 aa12.42□□□□□ -0.42
SGCE-210ENST00000472326 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
SGCE-210ENST00000472326 PMEPA1Q969W9 287 aa12.42□□□□□ -0.42
SGCE-210ENST00000472326 GZF1Q9H116 711 aaPredicted RBP12.42□□□□□ -0.42
SGCE-210ENST00000472326 TRIM33Q9UPN9 1127 aa12.42□□□□□ -0.42
SGCE-210ENST00000472326 KCNMA1Q12791 1236 aa12.41□□□□□ -0.42
SGCE-210ENST00000472326 CEP135Q66GS9 1140 aa12.41□□□□□ -0.42
SGCE-210ENST00000472326 DMRTB1Q96MA1 342 aa12.41□□□□□ -0.42
SGCE-210ENST00000472326 LATS2Q9NRM7 1088 aa12.41□□□□□ -0.42
SGCE-210ENST00000472326 AMOTL2Q9Y2J4 779 aa12.41□□□□□ -0.42
SGCE-210ENST00000472326 RASSF7Q02833 373 aa12.4□□□□□ -0.42
SGCE-210ENST00000472326 HHIPQ96QV1 700 aa12.4□□□□□ -0.42
SGCE-210ENST00000472326 FAM229AH3BQW9 127 aa12.39□□□□□ -0.43
SGCE-210ENST00000472326 PIK3R2O00459 728 aa12.39□□□□□ -0.43
SGCE-210ENST00000472326 TRAPPC3LQ5T215 181 aa12.39□□□□□ -0.43
SGCE-210ENST00000472326 ADAMTSL4Q6UY14 1074 aa12.39□□□□□ -0.43
SGCE-210ENST00000472326 DMRTC2Q8IXT2 367 aaPredicted RBP12.39□□□□□ -0.43
SGCE-210ENST00000472326 TTC9Q92623 222 aa12.39□□□□□ -0.43
SGCE-210ENST00000472326 PBX4Q9BYU1 374 aa12.39□□□□□ -0.43
SGCE-210ENST00000472326 LACRTQ9GZZ8 138 aa12.38□□□□□ -0.43
SGCE-210ENST00000472326 DZANK1Q9NVP4 752 aa12.38□□□□□ -0.43
SGCE-210ENST00000472326 NOP53Q9NZM5 478 aaKnown RBP12.38□□□□□ -0.43
SGCE-210ENST00000472326 EIF1AYO14602 144 aaKnown RBP12.37□□□□□ -0.43
SGCE-210ENST00000472326 SMNDC1O75940 238 aaKnown RBP eCLIP12.37□□□□□ -0.43
SGCE-210ENST00000472326 MSL1Q68DK7 614 aa12.37□□□□□ -0.43
SGCE-210ENST00000472326 NFKBIEO00221 500 aa12.36□□□□□ -0.43
SGCE-210ENST00000472326 CPNE3O75131 537 aaKnown RBP12.36□□□□□ -0.43
SGCE-210ENST00000472326 NEFLP07196 543 aa12.36□□□□□ -0.43
SGCE-210ENST00000472326 EDN3P14138 238 aa12.36□□□□□ -0.43
SGCE-210ENST00000472326 PEAR1Q5VY43 1037 aaPredicted RBP12.36□□□□□ -0.43
SGCE-210ENST00000472326 WFDC8Q8IUA0 241 aa12.36□□□□□ -0.43
SGCE-210ENST00000472326 ALKBH8Q96BT7 664 aaKnown RBP12.36□□□□□ -0.43
SGCE-210ENST00000472326 ASB16Q96NS5 453 aa12.36□□□□□ -0.43
SGCE-210ENST00000472326 POP1Q99575 1024 aaKnown RBP12.36□□□□□ -0.43
SGCE-210ENST00000472326 OSMRQ99650 979 aa12.36□□□□□ -0.43
SGCE-210ENST00000472326 ZKSCAN3Q9BRR0 538 aa12.36□□□□□ -0.43
SGCE-210ENST00000472326 BAG6P46379 1132 aa12.35□□□□□ -0.43
SGCE-210ENST00000472326 ZSCAN29Q8IWY8 852 aaPredicted RBP12.35□□□□□ -0.43
SGCE-210ENST00000472326 IL22RA1Q8N6P7 574 aa12.35□□□□□ -0.43
SGCE-210ENST00000472326 TREHO43280 583 aa12.34□□□□□ -0.43
SGCE-210ENST00000472326 DSC3Q14574 896 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms