RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 MAPK8P45983 427 aa8.14□□□□□ -1.11
CDHR3-208ENST00000471910 FGD1P98174 961 aa8.14□□□□□ -1.11
CDHR3-208ENST00000471910 DSC3Q14574 896 aa8.14□□□□□ -1.11
CDHR3-208ENST00000471910 MICALL1Q8N3F8 863 aa8.14□□□□□ -1.11
CDHR3-208ENST00000471910 NEDD1Q8NHV4 660 aa8.14□□□□□ -1.11
CDHR3-208ENST00000471910 NSUN5Q96P11 429 aaKnown RBP8.14□□□□□ -1.11
CDHR3-208ENST00000471910 CSRNP1Q96S65 589 aa8.14□□□□□ -1.11
CDHR3-208ENST00000471910 ZBTB42B2RXF5 422 aa8.13□□□□□ -1.11
CDHR3-208ENST00000471910 EIF1AYO14602 144 aaKnown RBP8.13□□□□□ -1.11
CDHR3-208ENST00000471910 CYP2E1P05181 493 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-208ENST00000471910 EDN3P14138 238 aa8.13□□□□□ -1.11
CDHR3-208ENST00000471910 ATP2B2Q01814 1243 aa8.13□□□□□ -1.11
CDHR3-208ENST00000471910 MLLT1Q03111 559 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-208ENST00000471910 ORC1Q13415 861 aa8.13□□□□□ -1.11
CDHR3-208ENST00000471910 KANK3Q6NY19 840 aa8.13□□□□□ -1.11
CDHR3-208ENST00000471910 DNAJC14Q6Y2X3 702 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-208ENST00000471910 FAM35AQ86V20 835 aa8.13□□□□□ -1.11
CDHR3-208ENST00000471910 ZSCAN1Q8NBB4 408 aa8.13□□□□□ -1.11
CDHR3-208ENST00000471910 EREGO14944 169 aa8.12□□□□□ -1.11
CDHR3-208ENST00000471910 CPB1P15086 417 aa8.12□□□□□ -1.11
CDHR3-208ENST00000471910 EIF2AK2P19525 551 aaKnown RBP8.12□□□□□ -1.11
CDHR3-208ENST00000471910 EAPPQ56P03 285 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-208ENST00000471910 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-208ENST00000471910 ELMSAN1Q6PJG2 1045 aa8.12□□□□□ -1.11
CDHR3-208ENST00000471910 C1orf229Q6ZS94 237 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-208ENST00000471910 HFE2Q6ZVN8 426 aa8.12□□□□□ -1.11
CDHR3-208ENST00000471910 WHAMMQ8TF30 809 aa8.12□□□□□ -1.11
CDHR3-208ENST00000471910 BTBD6Q96KE9 485 aa8.12□□□□□ -1.11
CDHR3-208ENST00000471910 CHRDQ9H2X0 955 aa8.12□□□□□ -1.11
CDHR3-208ENST00000471910 KANSL3Q9P2N6 904 aa8.12□□□□□ -1.11
CDHR3-208ENST00000471910 SALL4Q9UJQ4 1053 aa8.12□□□□□ -1.11
CDHR3-208ENST00000471910 J3QW42 95 aa8.11□□□□□ -1.11
CDHR3-208ENST00000471910 KIF4AO95239 1232 aa8.11□□□□□ -1.11
CDHR3-208ENST00000471910 FMR1Q06787 632 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDHR3-208ENST00000471910 CHSY3Q70JA7 882 aa8.11□□□□□ -1.11
CDHR3-208ENST00000471910 MDFIQ99750 246 aa8.11□□□□□ -1.11
CDHR3-208ENST00000471910 PNMA6FA0A0J9YX94 578 aa8.1□□□□□ -1.11
CDHR3-208ENST00000471910 RGS9O75916 674 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-208ENST00000471910 ENOX2Q16206 610 aaKnown RBP8.1□□□□□ -1.11
CDHR3-208ENST00000471910 ALG1LQ6GMV1 187 aa8.1□□□□□ -1.11
CDHR3-208ENST00000471910 FRRS1LQ9P0K9 344 aa8.1□□□□□ -1.11
CDHR3-208ENST00000471910 POLR3DP05423 398 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-208ENST00000471910 COL13A1Q5TAT6 717 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-208ENST00000471910 PSAPL1Q6NUJ1 521 aa8.09□□□□□ -1.11
CDHR3-208ENST00000471910 NPAS4Q8IUM7 802 aa8.09□□□□□ -1.11
CDHR3-208ENST00000471910 GALNT12Q8IXK2 581 aa8.09□□□□□ -1.11
CDHR3-208ENST00000471910 CCDC74AQ96AQ1 378 aa8.09□□□□□ -1.11
CDHR3-208ENST00000471910 BCL11AQ9H165 835 aa8.09□□□□□ -1.11
CDHR3-208ENST00000471910 RRAGCQ9HB90 399 aa8.09□□□□□ -1.11
CDHR3-208ENST00000471910 NLRP2Q9NX02 1062 aa8.09□□□□□ -1.11
CDHR3-208ENST00000471910 FAM181BA6NEQ2 426 aa8.08□□□□□ -1.12
CDHR3-208ENST00000471910 SHISA8B8ZZ34 492 aa8.08□□□□□ -1.12
CDHR3-208ENST00000471910 SMNDC1O75940 238 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDHR3-208ENST00000471910 P4HBP07237 508 aaKnown RBP8.08□□□□□ -1.12
CDHR3-208ENST00000471910 PERM1Q5SV97 790 aa8.08□□□□□ -1.12
CDHR3-208ENST00000471910 CEP120Q8N960 986 aa8.08□□□□□ -1.12
CDHR3-208ENST00000471910 NUDT8Q8WV74 236 aa8.08□□□□□ -1.12
CDHR3-208ENST00000471910 TTC9Q92623 222 aa8.08□□□□□ -1.12
CDHR3-208ENST00000471910 PLD4Q96BZ4 506 aa8.08□□□□□ -1.12
CDHR3-208ENST00000471910 SMG9Q9H0W8 520 aaKnown RBP8.08□□□□□ -1.12
CDHR3-208ENST00000471910 FAM177BA6PVY3 158 aa8.07□□□□□ -1.12
CDHR3-208ENST00000471910 PIK3R2O00459 728 aa8.07□□□□□ -1.12
CDHR3-208ENST00000471910 LILRB5O75023 590 aa8.07□□□□□ -1.12
CDHR3-208ENST00000471910 ARHGEF15O94989 841 aa8.07□□□□□ -1.12
CDHR3-208ENST00000471910 LDHBP07195 334 aaKnown RBP8.07□□□□□ -1.12
CDHR3-208ENST00000471910 USPL1Q5W0Q7 1092 aa8.07□□□□□ -1.12
CDHR3-208ENST00000471910 FBF1Q8TES7 1133 aa8.07□□□□□ -1.12
CDHR3-208ENST00000471910 JPH1Q9HDC5 661 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-208ENST00000471910 PPP4R2Q9NY27 417 aa8.07□□□□□ -1.12
CDHR3-208ENST00000471910 M0R082 166 aa8.06□□□□□ -1.12
CDHR3-208ENST00000471910 GADD45BO75293 160 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-208ENST00000471910 ZNF326Q5BKZ1 582 aaKnown RBP8.06□□□□□ -1.12
CDHR3-208ENST00000471910 CEP135Q66GS9 1140 aa8.06□□□□□ -1.12
CDHR3-208ENST00000471910 CACTIN-AS1Q8N1I8 211 aa8.06□□□□□ -1.12
CDHR3-208ENST00000471910 ZNF417Q8TAU3 575 aa8.06□□□□□ -1.12
CDHR3-208ENST00000471910 ZNF587Q96SQ5 575 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-208ENST00000471910 OSMRQ99650 979 aa8.06□□□□□ -1.12
CDHR3-208ENST00000471910 LPIN3Q9BQK8 851 aa8.06□□□□□ -1.12
CDHR3-208ENST00000471910 BCL2L13Q9BXK5 485 aa8.06□□□□□ -1.12
CDHR3-208ENST00000471910 PBX4Q9BYU1 374 aa8.06□□□□□ -1.12
CDHR3-208ENST00000471910 STARD13Q9Y3M8 1113 aa8.06□□□□□ -1.12
CDHR3-208ENST00000471910 ALBP02768 609 aa8.05□□□□□ -1.12
CDHR3-208ENST00000471910 FRMD6Q96NE9 622 aa8.05□□□□□ -1.12
CDHR3-208ENST00000471910 RASSF4Q9H2L5 321 aa8.05□□□□□ -1.12
CDHR3-208ENST00000471910 NPHS2Q9NP85 383 aa8.05□□□□□ -1.12
CDHR3-208ENST00000471910 NAGPAQ9UK23 515 aa8.05□□□□□ -1.12
CDHR3-208ENST00000471910 PRPF40AO75400 957 aaKnown RBP8.04□□□□□ -1.12
CDHR3-208ENST00000471910 ITGAEP38570 1179 aa8.04□□□□□ -1.12
CDHR3-208ENST00000471910 KIAA0319Q5VV43 1072 aa8.04□□□□□ -1.12
CDHR3-208ENST00000471910 C20orf204Q6ZNR8 217 aa8.04□□□□□ -1.12
CDHR3-208ENST00000471910 PODNQ7Z5L7 613 aa8.04□□□□□ -1.12
CDHR3-208ENST00000471910 EHD4Q9H223 541 aa8.04□□□□□ -1.12
CDHR3-208ENST00000471910 PRDM6Q9NQX0 595 aa8.04□□□□□ -1.12
CDHR3-208ENST00000471910 DZANK1Q9NVP4 752 aa8.04□□□□□ -1.12
CDHR3-208ENST00000471910 SPG7Q9UQ90 795 aa8.04□□□□□ -1.12
CDHR3-208ENST00000471910 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.04□□□□□ -1.12
CDHR3-208ENST00000471910 A0A1W2PP55 124 aa8.03□□□□□ -1.12
CDHR3-208ENST00000471910 PDE2AO00408 941 aaPredicted RBP8.03□□□□□ -1.12
CDHR3-208ENST00000471910 ATP11AP98196 1134 aa8.03□□□□□ -1.12
CDHR3-208ENST00000471910 XPCQ01831 940 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms