RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 ELMSAN1Q6PJG2 1045 aa4.75□□□□□ -1.65
SCN3A-207ENST00000471697 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.75□□□□□ -1.65
SCN3A-207ENST00000471697 TICAM2Q86XR7 235 aa4.75□□□□□ -1.65
SCN3A-207ENST00000471697 SREK1Q8WXA9 508 aaKnown RBP4.75□□□□□ -1.65
SCN3A-207ENST00000471697 PSMD1Q99460 953 aa4.75□□□□□ -1.65
SCN3A-207ENST00000471697 PHACTR1Q9C0D0 580 aa4.75□□□□□ -1.65
SCN3A-207ENST00000471697 BCCIPQ9P287 314 aaKnown RBP eCLIP4.75□□□□□ -1.65
SCN3A-207ENST00000471697 GNEQ9Y223 722 aaKnown RBP4.75□□□□□ -1.65
SCN3A-207ENST00000471697 ZBTB42B2RXF5 422 aa4.74□□□□□ -1.65
SCN3A-207ENST00000471697 CLSTN1O94985 981 aa4.74□□□□□ -1.65
SCN3A-207ENST00000471697 GPLD1P80108 840 aa4.74□□□□□ -1.65
SCN3A-207ENST00000471697 IER5Q5VY09 327 aa4.74□□□□□ -1.65
SCN3A-207ENST00000471697 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCN3A-207ENST00000471697 VRTNQ9H8Y1 702 aa4.74□□□□□ -1.65
SCN3A-207ENST00000471697 PRM3Q9NNZ6 103 aa4.74□□□□□ -1.65
SCN3A-207ENST00000471697 TBCELQ5QJ74 424 aa4.73□□□□□ -1.65
SCN3A-207ENST00000471697 TRIM42Q8IWZ5 723 aa4.73□□□□□ -1.65
SCN3A-207ENST00000471697 AGGF1Q8N302 714 aaeCLIP4.73□□□□□ -1.65
SCN3A-207ENST00000471697 FAM46AQ96IP4 442 aaKnown RBP4.73□□□□□ -1.65
SCN3A-207ENST00000471697 CEP41Q9BYV8 373 aa4.73□□□□□ -1.65
SCN3A-207ENST00000471697 C11orf16Q9NQ32 467 aa4.73□□□□□ -1.65
SCN3A-207ENST00000471697 POM121CA8CG34 1229 aa4.72□□□□□ -1.65
SCN3A-207ENST00000471697 PIK3CDO00329 1044 aa4.72□□□□□ -1.65
SCN3A-207ENST00000471697 LZTS3O60299 673 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-207ENST00000471697 PRNPP04156 253 aa4.72□□□□□ -1.65
SCN3A-207ENST00000471697 TCF3P15923 654 aa4.72□□□□□ -1.65
SCN3A-207ENST00000471697 SETDB1Q15047 1291 aa4.72□□□□□ -1.65
SCN3A-207ENST00000471697 DHX32Q7L7V1 743 aaKnown RBP4.72□□□□□ -1.65
SCN3A-207ENST00000471697 WWC1Q8IX03 1113 aa4.72□□□□□ -1.65
SCN3A-207ENST00000471697 TNS4Q8IZW8 715 aa4.72□□□□□ -1.65
SCN3A-207ENST00000471697 GLMNQ92990 594 aa4.72□□□□□ -1.65
SCN3A-207ENST00000471697 BRPF3Q9ULD4 1205 aa4.72□□□□□ -1.65
SCN3A-207ENST00000471697 HCN4Q9Y3Q4 1203 aa4.72□□□□□ -1.65
SCN3A-207ENST00000471697 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-207ENST00000471697 HMX2A2RU54 273 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 CARNS1A5YM72 827 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 GTF2IP78347 998 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 SHKBP1Q8TBC3 707 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 ADAMTS19Q8TE59 1207 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 UBXN4Q92575 508 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 UTP4Q969X6 686 aaKnown RBP4.71□□□□□ -1.66
SCN3A-207ENST00000471697 MYRFLQ96LU7 910 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 FAM83CQ9BQN1 747 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 SMG9Q9H0W8 520 aaKnown RBP4.71□□□□□ -1.66
SCN3A-207ENST00000471697 NOD1Q9Y239 953 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 CHMP3Q9Y3E7 222 aa4.71□□□□□ -1.66
SCN3A-207ENST00000471697 TMEM88BA6NKF7 163 aa4.7□□□□□ -1.66
SCN3A-207ENST00000471697 ZNF16P17020 682 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-207ENST00000471697 NRLP54845 237 aa4.7□□□□□ -1.66
SCN3A-207ENST00000471697 MSMPQ1L6U9 139 aa4.7□□□□□ -1.66
SCN3A-207ENST00000471697 WASHC4Q2M389 1173 aa4.7□□□□□ -1.66
SCN3A-207ENST00000471697 EML3Q32P44 896 aa4.7□□□□□ -1.66
SCN3A-207ENST00000471697 CFAP70Q5T0N1 1121 aa4.7□□□□□ -1.66
SCN3A-207ENST00000471697 TMED8Q6PL24 325 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-207ENST00000471697 DNAJC14Q6Y2X3 702 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-207ENST00000471697 NFXL1Q6ZNB6 911 aa4.7□□□□□ -1.66
SCN3A-207ENST00000471697 CLEC10AQ8IUN9 316 aa4.7□□□□□ -1.66
SCN3A-207ENST00000471697 FBXL18Q96ME1 805 aa4.7□□□□□ -1.66
SCN3A-207ENST00000471697 ZFATQ9P243 1243 aa4.7□□□□□ -1.66
SCN3A-207ENST00000471697 DMGDHQ9UI17 866 aaKnown RBP4.7□□□□□ -1.66
SCN3A-207ENST00000471697 ANGEL1Q9UNK9 670 aaKnown RBP4.7□□□□□ -1.66
SCN3A-207ENST00000471697 ANKRD62A6NC57 917 aa4.69□□□□□ -1.66
SCN3A-207ENST00000471697 GRNP28799 593 aaKnown RBP4.69□□□□□ -1.66
SCN3A-207ENST00000471697 HOXA10P31260 410 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-207ENST00000471697 SEMA3FQ13275 785 aa4.69□□□□□ -1.66
SCN3A-207ENST00000471697 CACTIN-AS1Q8N1I8 211 aa4.69□□□□□ -1.66
SCN3A-207ENST00000471697 STAG2Q8N3U4 1231 aa4.69□□□□□ -1.66
SCN3A-207ENST00000471697 HIRIP3Q9BW71 556 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-207ENST00000471697 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
SCN3A-207ENST00000471697 ALG2Q9H553 416 aa4.69□□□□□ -1.66
SCN3A-207ENST00000471697 PIM2Q9P1W9 311 aa4.69□□□□□ -1.66
SCN3A-207ENST00000471697 CCDC39Q9UFE4 941 aa4.69□□□□□ -1.66
SCN3A-207ENST00000471697 PLEKHD1A6NEE1 506 aa4.68□□□□□ -1.66
SCN3A-207ENST00000471697 EPB42P16452 691 aa4.68□□□□□ -1.66
SCN3A-207ENST00000471697 RFX1P22670 979 aa4.68□□□□□ -1.66
SCN3A-207ENST00000471697 VAMP1P23763 118 aa4.68□□□□□ -1.66
SCN3A-207ENST00000471697 ARID4AP29374 1257 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-207ENST00000471697 ZC3H6P61129 1189 aaKnown RBP4.68□□□□□ -1.66
SCN3A-207ENST00000471697 PSME1Q06323 249 aa4.68□□□□□ -1.66
SCN3A-207ENST00000471697 COL19A1Q14993 1142 aa4.68□□□□□ -1.66
SCN3A-207ENST00000471697 FAM20CQ8IXL6 584 aa4.68□□□□□ -1.66
SCN3A-207ENST00000471697 ALDH16A1Q8IZ83 802 aa4.68□□□□□ -1.66
SCN3A-207ENST00000471697 IL22RA1Q8N6P7 574 aa4.68□□□□□ -1.66
SCN3A-207ENST00000471697 MUC3BQ9H195 1237 aa4.68□□□□□ -1.66
SCN3A-207ENST00000471697 TSPAN10Q9H1Z9 355 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-207ENST00000471697 LOC102724159A0A0B4J2E5 919 aa4.67□□□□□ -1.66
SCN3A-207ENST00000471697 TGFBR3LH3BV60 316 aa4.67□□□□□ -1.66
SCN3A-207ENST00000471697 M0R2N6 131 aa4.67□□□□□ -1.66
SCN3A-207ENST00000471697 SOX11P35716 441 aa4.67□□□□□ -1.66
SCN3A-207ENST00000471697 PWP2Q15269 919 aaKnown RBP4.67□□□□□ -1.66
SCN3A-207ENST00000471697 CPSF6Q16630 551 aaKnown RBP eCLIP4.67□□□□□ -1.66
SCN3A-207ENST00000471697 ZNF648Q5T619 568 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-207ENST00000471697 NOL8Q76FK4 1167 aaKnown RBP4.67□□□□□ -1.66
SCN3A-207ENST00000471697 VSIG10LQ86VR7 867 aa4.67□□□□□ -1.66
SCN3A-207ENST00000471697 PLD4Q96BZ4 506 aa4.67□□□□□ -1.66
SCN3A-207ENST00000471697 PRDM16Q9HAZ2 1276 aa4.67□□□□□ -1.66
SCN3A-207ENST00000471697 MARCH6O60337 910 aa4.66□□□□□ -1.66
SCN3A-207ENST00000471697 ATG7O95352 703 aa4.66□□□□□ -1.66
SCN3A-207ENST00000471697 WISP1O95388 367 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms