RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SMG9Q9H0W8 520 aaKnown RBP10.87□□□□□ -0.67
CCDC39-202ENST00000471307 EGFL7Q9UHF1 273 aa10.87□□□□□ -0.67
CCDC39-202ENST00000471307 A0A0A0MRY4 1105 aa10.86□□□□□ -0.67
CCDC39-202ENST00000471307 APBA3O96018 575 aa10.86□□□□□ -0.67
CCDC39-202ENST00000471307 ELNP15502 786 aa10.86□□□□□ -0.67
CCDC39-202ENST00000471307 CHRNA4P43681 627 aa10.86□□□□□ -0.67
CCDC39-202ENST00000471307 HFE2Q6ZVN8 426 aa10.86□□□□□ -0.67
CCDC39-202ENST00000471307 EDEM1Q92611 657 aa10.86□□□□□ -0.67
CCDC39-202ENST00000471307 NSUN5Q96P11 429 aaKnown RBP10.86□□□□□ -0.67
CCDC39-202ENST00000471307 PDGFAP04085 211 aa10.85□□□□□ -0.67
CCDC39-202ENST00000471307 HYAL2Q12891 473 aa10.85□□□□□ -0.67
CCDC39-202ENST00000471307 CACTIN-AS1Q8N1I8 211 aa10.85□□□□□ -0.67
CCDC39-202ENST00000471307 TTC16Q8NEE8 873 aa10.85□□□□□ -0.67
CCDC39-202ENST00000471307 PLD4Q96BZ4 506 aa10.85□□□□□ -0.67
CCDC39-202ENST00000471307 ELP3Q9H9T3 547 aa10.85□□□□□ -0.67
CCDC39-202ENST00000471307 USP5P45974 858 aa10.84□□□□□ -0.67
CCDC39-202ENST00000471307 DNM1Q05193 864 aaKnown RBP10.84□□□□□ -0.67
CCDC39-202ENST00000471307 ZNF438Q7Z4V0 828 aa10.84□□□□□ -0.67
CCDC39-202ENST00000471307 RETREG2Q8NC44 543 aa10.84□□□□□ -0.67
CCDC39-202ENST00000471307 J3QW42 95 aa10.83□□□□□ -0.68
CCDC39-202ENST00000471307 KIF4AO95239 1232 aa10.83□□□□□ -0.68
CCDC39-202ENST00000471307 MTMR3Q13615 1198 aa10.83□□□□□ -0.68
CCDC39-202ENST00000471307 WFDC8Q8IUA0 241 aa10.83□□□□□ -0.68
CCDC39-202ENST00000471307 SPACA7Q96KW9 195 aa10.83□□□□□ -0.68
CCDC39-202ENST00000471307 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
CCDC39-202ENST00000471307 ABL1P00519 1130 aa10.82□□□□□ -0.68
CCDC39-202ENST00000471307 DMRTC2Q8IXT2 367 aaPredicted RBP10.82□□□□□ -0.68
CCDC39-202ENST00000471307 FMR1NBQ8N0W7 255 aaPredicted RBP10.82□□□□□ -0.68
CCDC39-202ENST00000471307 C9orf172C9J069 976 aa10.81□□□□□ -0.68
CCDC39-202ENST00000471307 EHHADHQ08426 723 aa10.81□□□□□ -0.68
CCDC39-202ENST00000471307 TMEM63CQ9P1W3 806 aa10.81□□□□□ -0.68
CCDC39-202ENST00000471307 AAMPQ13685 434 aa10.8□□□□□ -0.68
CCDC39-202ENST00000471307 PMEPA1Q969W9 287 aa10.8□□□□□ -0.68
CCDC39-202ENST00000471307 ICMTO60725 284 aa10.79□□□□□ -0.68
CCDC39-202ENST00000471307 BAG6P46379 1132 aa10.79□□□□□ -0.68
CCDC39-202ENST00000471307 NRG1Q02297 640 aaPredicted RBP10.79□□□□□ -0.68
CCDC39-202ENST00000471307 GRIK4Q16099 956 aa10.79□□□□□ -0.68
CCDC39-202ENST00000471307 LENG1Q96BZ8 264 aaPredicted RBP10.79□□□□□ -0.68
CCDC39-202ENST00000471307 GGNBP2Q9H3C7 697 aa10.79□□□□□ -0.68
CCDC39-202ENST00000471307 SRA1Q9HD15 236 aaKnown RBP10.79□□□□□ -0.68
CCDC39-202ENST00000471307 POLIQ9UNA4 740 aa10.79□□□□□ -0.68
CCDC39-202ENST00000471307 GATA4P43694 442 aa10.78□□□□□ -0.68
CCDC39-202ENST00000471307 ZNF211Q13398 564 aaPredicted RBP10.78□□□□□ -0.68
CCDC39-202ENST00000471307 C8orf34Q49A92 452 aa10.78□□□□□ -0.68
CCDC39-202ENST00000471307 COL13A1Q5TAT6 717 aaPredicted RBP10.78□□□□□ -0.68
CCDC39-202ENST00000471307 FBXO11Q86XK2 927 aa10.78□□□□□ -0.68
CCDC39-202ENST00000471307 DCAF11Q8TEB1 546 aa10.78□□□□□ -0.68
CCDC39-202ENST00000471307 MUC3BQ9H195 1237 aa10.78□□□□□ -0.68
CCDC39-202ENST00000471307 FZD6O60353 706 aa10.77□□□□□ -0.69
CCDC39-202ENST00000471307 SMNDC1O75940 238 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCDC39-202ENST00000471307 NCAPG2Q86XI2 1143 aa10.77□□□□□ -0.69
CCDC39-202ENST00000471307 MAP4K3Q8IVH8 894 aa10.77□□□□□ -0.69
CCDC39-202ENST00000471307 TXNDC2Q86VQ3 553 aa10.76□□□□□ -0.69
CCDC39-202ENST00000471307 CYP2E1P05181 493 aaPredicted RBP10.75□□□□□ -0.69
CCDC39-202ENST00000471307 SELPP16109 830 aa10.75□□□□□ -0.69
CCDC39-202ENST00000471307 CES1P23141 567 aa10.75□□□□□ -0.69
CCDC39-202ENST00000471307 GDF6Q6KF10 455 aaPredicted RBP10.75□□□□□ -0.69
CCDC39-202ENST00000471307 IL22RA1Q8N6P7 574 aa10.75□□□□□ -0.69
CCDC39-202ENST00000471307 CEP120Q8N960 986 aa10.75□□□□□ -0.69
CCDC39-202ENST00000471307 ANO2Q9NQ90 1003 aa10.75□□□□□ -0.69
CCDC39-202ENST00000471307 CNTN3Q9P232 1028 aa10.75□□□□□ -0.69
CCDC39-202ENST00000471307 H3BRB1 525 aa10.74□□□□□ -0.69
CCDC39-202ENST00000471307 SERPINB4P48594 390 aa10.74□□□□□ -0.69
CCDC39-202ENST00000471307 ADGRE1Q14246 886 aa10.74□□□□□ -0.69
CCDC39-202ENST00000471307 GLYCTKQ8IVS8 523 aa10.74□□□□□ -0.69
CCDC39-202ENST00000471307 GJD3Q8N144 294 aa10.74□□□□□ -0.69
CCDC39-202ENST00000471307 CCER1Q8TC90 406 aaPredicted RBP10.74□□□□□ -0.69
CCDC39-202ENST00000471307 SNX29Q8TEQ0 813 aa10.74□□□□□ -0.69
CCDC39-202ENST00000471307 TUT1Q9H6E5 874 aaKnown RBP10.74□□□□□ -0.69
CCDC39-202ENST00000471307 SALL4Q9UJQ4 1053 aa10.74□□□□□ -0.69
CCDC39-202ENST00000471307 ATP11AP98196 1134 aa10.73□□□□□ -0.69
CCDC39-202ENST00000471307 IGF2-ASQ6U949 168 aa10.73□□□□□ -0.69
CCDC39-202ENST00000471307 C1orf127Q8N9H9 656 aa10.73□□□□□ -0.69
CCDC39-202ENST00000471307 PBX4Q9BYU1 374 aa10.73□□□□□ -0.69
CCDC39-202ENST00000471307 TRIM33Q9UPN9 1127 aa10.73□□□□□ -0.69
CCDC39-202ENST00000471307 A6NHS1 94 aa10.72□□□□□ -0.69
CCDC39-202ENST00000471307 TNFRSF21O75509 655 aa10.72□□□□□ -0.69
CCDC39-202ENST00000471307 CEP135Q66GS9 1140 aa10.72□□□□□ -0.69
CCDC39-202ENST00000471307 RASSF4Q9H2L5 321 aa10.72□□□□□ -0.69
CCDC39-202ENST00000471307 CHRDQ9H2X0 955 aa10.72□□□□□ -0.69
CCDC39-202ENST00000471307 DEAF1O75398 565 aaPredicted RBP10.71□□□□□ -0.69
CCDC39-202ENST00000471307 MBTPS1Q14703 1052 aa10.71□□□□□ -0.69
CCDC39-202ENST00000471307 TXNRD3Q86VQ6 643 aa10.71□□□□□ -0.69
CCDC39-202ENST00000471307 CCDC87Q9NVE4 849 aa10.71□□□□□ -0.69
CCDC39-202ENST00000471307 KANSL3Q9P2N6 904 aa10.71□□□□□ -0.69
CCDC39-202ENST00000471307 PPME1Q9Y570 386 aa10.71□□□□□ -0.69
CCDC39-202ENST00000471307 DLL1O00548 723 aa10.7□□□□□ -0.7
CCDC39-202ENST00000471307 ADAM23O75077 832 aa10.7□□□□□ -0.7
CCDC39-202ENST00000471307 PHACTR2O75167 634 aa10.7□□□□□ -0.7
CCDC39-202ENST00000471307 BRD1O95696 1058 aa10.7□□□□□ -0.7
CCDC39-202ENST00000471307 ECM1Q16610 540 aa10.7□□□□□ -0.7
CCDC39-202ENST00000471307 SHISA2Q6UWI4 295 aa10.7□□□□□ -0.7
CCDC39-202ENST00000471307 USP21Q9UK80 565 aa10.7□□□□□ -0.7
CCDC39-202ENST00000471307 BRPF3Q9ULD4 1205 aa10.7□□□□□ -0.7
CCDC39-202ENST00000471307 FAM177BA6PVY3 158 aa10.69□□□□□ -0.7
CCDC39-202ENST00000471307 ARHGAP4P98171 946 aa10.69□□□□□ -0.7
CCDC39-202ENST00000471307 SUZ12Q15022 739 aaKnown RBP10.69□□□□□ -0.7
CCDC39-202ENST00000471307 CITED4Q96RK1 184 aa10.69□□□□□ -0.7
CCDC39-202ENST00000471307 K7ELQ4 463 aaPredicted RBP10.68□□□□□ -0.7
CCDC39-202ENST00000471307 NDUFB5O43674 189 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms