RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 KDM5CP41229 1560 aa10.98□□□□□ -0.65
UBE3C-205ENST00000470408 ALDH1B1P30837 517 aa10.98□□□□□ -0.65
UBE3C-205ENST00000470408 TBC1D9Q6ZT07 1266 aa10.98□□□□□ -0.65
UBE3C-205ENST00000470408 CAGE1Q8TC20 777 aa10.98□□□□□ -0.65
UBE3C-205ENST00000470408 CARD10Q9BWT7 1032 aa10.98□□□□□ -0.65
UBE3C-205ENST00000470408 GTPBP4Q9BZE4 634 aaKnown RBP10.98□□□□□ -0.65
UBE3C-205ENST00000470408 RTL9Q8NET4 1388 aa10.98□□□□□ -0.65
UBE3C-205ENST00000470408 H0YIN7 160 aa10.97□□□□□ -0.65
UBE3C-205ENST00000470408 EIF3JO75822 258 aaKnown RBP10.97□□□□□ -0.65
UBE3C-205ENST00000470408 USP8P40818 1118 aa10.97□□□□□ -0.65
UBE3C-205ENST00000470408 MATR3P43243 847 aaKnown RBP eCLIP10.97□□□□□ -0.65
UBE3C-205ENST00000470408 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
UBE3C-205ENST00000470408 ZNF397Q8NF99 534 aaPredicted RBP10.97□□□□□ -0.65
UBE3C-205ENST00000470408 ORC3Q9UBD5 711 aaPredicted RBP10.97□□□□□ -0.65
UBE3C-205ENST00000470408 ERLIN1O75477 346 aa10.97□□□□□ -0.65
UBE3C-205ENST00000470408 SCLT1Q96NL6 688 aa10.97□□□□□ -0.65
UBE3C-205ENST00000470408 CAVIN2O95810 425 aa10.97□□□□□ -0.65
UBE3C-205ENST00000470408 BRPF1P55201 1214 aaPredicted RBP10.97□□□□□ -0.65
UBE3C-205ENST00000470408 C16orf71Q8IYS4 520 aaPredicted RBP10.97□□□□□ -0.65
UBE3C-205ENST00000470408 WDR66Q8TBY9 1149 aa10.97□□□□□ -0.65
UBE3C-205ENST00000470408 ZBTB43O43298 467 aa10.97□□□□□ -0.65
UBE3C-205ENST00000470408 CETN2P41208 172 aa10.97□□□□□ -0.65
UBE3C-205ENST00000470408 PIBF1Q8WXW3 757 aa10.97□□□□□ -0.65
UBE3C-205ENST00000470408 CALML3P27482 149 aa10.96□□□□□ -0.65
UBE3C-205ENST00000470408 CETN1Q12798 172 aa10.96□□□□□ -0.65
UBE3C-205ENST00000470408 IFIT1BQ5T764 474 aaKnown RBP10.96□□□□□ -0.65
UBE3C-205ENST00000470408 DNAJC5Q9H3Z4 198 aa10.96□□□□□ -0.65
UBE3C-205ENST00000470408 DDX19AQ9NUU7 478 aaKnown RBP10.96□□□□□ -0.65
UBE3C-205ENST00000470408 STX8Q9UNK0 236 aa10.96□□□□□ -0.65
UBE3C-205ENST00000470408 ERLIN2O94905 339 aa10.96□□□□□ -0.65
UBE3C-205ENST00000470408 PUM3Q15397 648 aaKnown RBP10.96□□□□□ -0.65
UBE3C-205ENST00000470408 PAF1Q8N7H5 531 aa10.96□□□□□ -0.65
UBE3C-205ENST00000470408 GGA1Q9UJY5 639 aa10.96□□□□□ -0.65
UBE3C-205ENST00000470408 CEP85Q6P2H3 762 aa10.96□□□□□ -0.66
UBE3C-205ENST00000470408 CCDC150Q8NCX0 1101 aa10.96□□□□□ -0.66
UBE3C-205ENST00000470408 AOX1Q06278 1338 aa10.96□□□□□ -0.66
UBE3C-205ENST00000470408 KIF2AO00139 706 aaPredicted RBP10.96□□□□□ -0.66
UBE3C-205ENST00000470408 RBM25P49756 843 aaKnown RBP10.96□□□□□ -0.66
UBE3C-205ENST00000470408 FKBP15Q5T1M5 1219 aa10.96□□□□□ -0.66
UBE3C-205ENST00000470408 TBC1D22AQ8WUA7 517 aa10.96□□□□□ -0.66
UBE3C-205ENST00000470408 NAP1L4Q99733 375 aaKnown RBP10.96□□□□□ -0.66
UBE3C-205ENST00000470408 SPC24Q8NBT2 197 aa10.95□□□□□ -0.66
UBE3C-205ENST00000470408 ANKARQ7Z5J8 1434 aa10.95□□□□□ -0.66
UBE3C-205ENST00000470408 TTC37Q6PGP7 1564 aa10.95□□□□□ -0.66
UBE3C-205ENST00000470408 VPS36Q86VN1 386 aa10.95□□□□□ -0.66
UBE3C-205ENST00000470408 HELLSQ9NRZ9 838 aa10.95□□□□□ -0.66
UBE3C-205ENST00000470408 CLEC11AQ9Y240 323 aa10.95□□□□□ -0.66
UBE3C-205ENST00000470408 HIBADHP31937 336 aaKnown RBP10.95□□□□□ -0.66
UBE3C-205ENST00000470408 UBA7P41226 1012 aa10.95□□□□□ -0.66
UBE3C-205ENST00000470408 RTN1Q16799 776 aa10.95□□□□□ -0.66
UBE3C-205ENST00000470408 ESYT1Q9BSJ8 1104 aa10.95□□□□□ -0.66
UBE3C-205ENST00000470408 SDSP20132 328 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 EIF5P55010 431 aaKnown RBP10.94□□□□□ -0.66
UBE3C-205ENST00000470408 EIF6P56537 245 aaKnown RBP10.94□□□□□ -0.66
UBE3C-205ENST00000470408 FAM196AQ6ZSG2 479 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 APBA3O96018 575 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 ZBTB40Q9NUA8 1239 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 MROH5Q6ZUA9 1318 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 PHKG2P15735 406 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 CWF19L2Q2TBE0 894 aaKnown RBP10.94□□□□□ -0.66
UBE3C-205ENST00000470408 JARID2Q92833 1246 aaPredicted RBP10.94□□□□□ -0.66
UBE3C-205ENST00000470408 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 IQCEQ6IPM2 695 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 MICU3Q86XE3 530 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 GLT8D2Q9H1C3 349 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 THRAP3Q9Y2W1 955 aaKnown RBP10.94□□□□□ -0.66
UBE3C-205ENST00000470408 SPATA31E1Q6ZUB1 1445 aa10.94□□□□□ -0.66
UBE3C-205ENST00000470408 USP37Q86T82 979 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 SHROOM2Q13796 1616 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 KIAA0754O94854 1291 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 SMC5Q8IY18 1101 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 TSPYL6Q8N831 410 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 RBM8AQ9Y5S9 174 aaKnown RBP10.93□□□□□ -0.66
UBE3C-205ENST00000470408 KLF18A0A0U1RQI7 1052 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 CCDC183Q5T5S1 534 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 FAM114A1Q8IWE2 563 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 DNAJC10Q8IXB1 793 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 C6orf50Q9HD87 102 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 KDM5AP29375 1690 aaKnown RBP10.93□□□□□ -0.66
UBE3C-205ENST00000470408 METP08581 1390 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 UFL1O94874 794 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 ITGA6P23229 1130 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 EIF4A1P60842 406 aaKnown RBP10.93□□□□□ -0.66
UBE3C-205ENST00000470408 ARHGEF25Q86VW2 580 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 NLGN1Q8N2Q7 840 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 LPIN2Q92539 896 aa10.93□□□□□ -0.66
UBE3C-205ENST00000470408 TMC4Q7Z404 712 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 SLC26A6Q9BXS9 759 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 KDM6BO15054 1643 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 STX6O43752 255 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 HAND2P61296 217 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 TCIRG1Q13488 830 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 FERMT3Q86UX7 667 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 BICC1Q9H694 974 aaKnown RBP10.92□□□□□ -0.66
UBE3C-205ENST00000470408 RMND1Q9NWS8 449 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 KAT6BQ8WYB5 2073 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 AXDND1Q5T1B0 1012 aaPredicted RBP10.92□□□□□ -0.66
UBE3C-205ENST00000470408 ABCC3O15438 1527 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 TFCP2Q12800 502 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 DPP8Q6V1X1 898 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms