RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 CDC42BPGQ6DT37 1551 aa11.09□□□□□ -0.63
NHLRC3-203ENST00000470258 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
NHLRC3-203ENST00000470258 CTAGE5O15320 804 aa11.09□□□□□ -0.63
NHLRC3-203ENST00000470258 LRRC2Q9BYS8 371 aa11.09□□□□□ -0.63
NHLRC3-203ENST00000470258 PSDA5PKW4 1024 aaPredicted RBP11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 SLC27A2O14975 620 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 CDK12Q9NYV4 1490 aaPredicted RBP11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 EFCAB8A8MWE9 144 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 GNG11P61952 73 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 NECTIN1Q15223 517 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 LRRFIP1Q32MZ4 808 aaKnown RBP11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 DPCR1Q3MIW9 517 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 CCDC158Q5M9N0 1113 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 CCDC30Q5VVM6 783 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 CLASRPQ8N2M8 674 aaKnown RBP11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 SSH3Q8TE77 659 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 JRKLQ9Y4A0 524 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 A0A1B0GUL7 405 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 PHACTR2O75167 634 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 RESTQ13127 1097 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 NMIQ13287 307 aaPredicted RBP11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 ANKRD1Q15327 319 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 E2F4Q16254 413 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 FOXR1Q6PIV2 292 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 REXO1L1PQ8IX06 675 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 OSBPL5Q9H0X9 879 aaPredicted RBP11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 PLEKHA4Q9H4M7 779 aa11.08□□□□□ -0.64
NHLRC3-203ENST00000470258 A0A1B0GVL5 298 aa11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 ACTN2P35609 894 aa11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 CTR9Q6PD62 1173 aa11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 IMPACTQ9P2X3 320 aa11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 H3BQF6 201 aa11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 APPP05067 770 aa11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 TPM1P09493 284 aa11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 EIF2S2P20042 333 aaKnown RBP11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 HSP90AB2PQ58FF8 381 aa11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 PARD6BQ9BYG5 372 aa11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 ESF1Q9H501 851 aaKnown RBP11.07□□□□□ -0.64
NHLRC3-203ENST00000470258 MYO5BQ9ULV0 1848 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 NBPF7P0C2Y1 421 aaPredicted RBP11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 RPS6KB1P23443 525 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 PPP2R3AQ06190 1150 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 USP28Q96RU2 1077 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 ANKRD26Q9UPS8 1709 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 CEBPAP49715 358 aaPredicted RBP11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 TOB2Q14106 344 aaPredicted RBP11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 SF3A1Q15459 793 aaKnown RBP11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 PACS2Q86VP3 889 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 GPATCH3Q96I76 525 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 SLC26A8Q96RN1 970 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 SRRTQ9BXP5 876 aaKnown RBP11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 PHAXQ9H814 394 aaKnown RBP11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 PDE11AQ9HCR9 933 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 STRCQ7RTU9 1775 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 PHLPP2Q6ZVD8 1323 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 AATKQ6ZMQ8 1374 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 SERPINC1P01008 464 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 FAM160A1Q05DH4 1040 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 HSP90AA4PQ58FG1 418 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 AACSQ86V21 672 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 PDILTQ8N807 584 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 EXOC4Q96A65 974 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 DEF6Q9H4E7 631 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 ECHDC1Q9NTX5 307 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 PARP3Q9Y6F1 533 aa11.06□□□□□ -0.64
NHLRC3-203ENST00000470258 A2ML1A8K2U0 1454 aa11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 FANCGO15287 622 aa11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 CCP110O43303 1012 aa11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 LONRF2Q1L5Z9 754 aa11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 CFAP100Q494V2 611 aa11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 GEMIN8Q9NWZ8 242 aaKnown RBP11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 PA2G4Q9UQ80 394 aaKnown RBP11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 ATP1A3P13637 1013 aa11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 MTHFSDQ2M296 383 aaKnown RBP11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 ATG3Q9NT62 314 aa11.05□□□□□ -0.64
NHLRC3-203ENST00000470258 GPR161Q8N6U8 529 aaKnown RBP11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 CCDC102AQ96A19 550 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 MYCBPQ99417 103 aaPredicted RBP11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 FUT8Q9BYC5 575 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 ZSCAN16Q9H4T2 348 aaPredicted RBP11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 YY1AP1Q9H869 796 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 ATP7BP35670 1465 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 ADCY9O60503 1353 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 TNRQ92752 1358 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 A0A0D9SFI3 127 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 ATP8B1O43520 1251 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 WWC2Q6AWC2 1192 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 TRIM65Q6PJ69 517 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 WDR24Q96S15 920 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 CCDC8Q9H0W5 538 aaPredicted RBP11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 BOLA2Q9H3K6 86 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 KCND1Q9NSA2 647 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 KIF20BQ96Q89 1820 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 EIF3CLB5ME19 914 aaKnown RBP11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 IVLP07476 585 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 CCT2P78371 535 aaKnown RBP11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 FANCCQ00597 558 aa11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 KARSQ15046 597 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms