RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 DDX46Q7L014 1031 aaKnown RBP20.52■□□□□ 0.88
C1orf43-207ENST00000470180 ZPR1O75312 459 aa20.52■□□□□ 0.87
C1orf43-207ENST00000470180 PDE8BO95263 885 aa20.52■□□□□ 0.87
C1orf43-207ENST00000470180 IFIT1P09914 478 aaKnown RBP20.52■□□□□ 0.87
C1orf43-207ENST00000470180 RBM6P78332 1123 aaKnown RBP20.52■□□□□ 0.87
C1orf43-207ENST00000470180 NBR1Q14596 966 aa20.52■□□□□ 0.87
C1orf43-207ENST00000470180 CCDC152Q4G0S7 254 aa20.52■□□□□ 0.87
C1orf43-207ENST00000470180 KBTBD3Q8NAB2 608 aa20.52■□□□□ 0.87
C1orf43-207ENST00000470180 PAG1Q9NWQ8 432 aa20.52■□□□□ 0.87
C1orf43-207ENST00000470180 CHGBP05060 677 aa20.51■□□□□ 0.87
C1orf43-207ENST00000470180 SLC10A5Q5PT55 438 aa20.51■□□□□ 0.87
C1orf43-207ENST00000470180 C3orf67Q6ZVT6 689 aa20.51■□□□□ 0.87
C1orf43-207ENST00000470180 RFX7Q2KHR2 1363 aa20.51■□□□□ 0.87
C1orf43-207ENST00000470180 GOLIM4O00461 696 aa20.5■□□□□ 0.87
C1orf43-207ENST00000470180 DDIT3P35638 169 aa20.5■□□□□ 0.87
C1orf43-207ENST00000470180 CCDC158Q5M9N0 1113 aa20.5■□□□□ 0.87
C1orf43-207ENST00000470180 ZNF772Q68DY9 489 aaPredicted RBP20.5■□□□□ 0.87
C1orf43-207ENST00000470180 C4AP0C0L4 1744 aa20.5■□□□□ 0.87
C1orf43-207ENST00000470180 MED23Q9ULK4 1368 aa20.5■□□□□ 0.87
C1orf43-207ENST00000470180 CASZ1Q86V15 1759 aa20.5■□□□□ 0.87
C1orf43-207ENST00000470180 GORABQ5T7V8 394 aa20.5■□□□□ 0.87
C1orf43-207ENST00000470180 RASEFQ8IZ41 740 aa20.5■□□□□ 0.87
C1orf43-207ENST00000470180 SNX14Q9Y5W7 946 aa20.5■□□□□ 0.87
C1orf43-207ENST00000470180 CCDC171Q6TFL3 1326 aa20.49■□□□□ 0.87
C1orf43-207ENST00000470180 MROH5Q6ZUA9 1318 aa20.49■□□□□ 0.87
C1orf43-207ENST00000470180 COL4A1P02462 1669 aa20.49■□□□□ 0.87
C1orf43-207ENST00000470180 COL24A1Q17RW2 1714 aa20.49■□□□□ 0.87
C1orf43-207ENST00000470180 ST18O60284 1047 aa20.49■□□□□ 0.87
C1orf43-207ENST00000470180 NEK4P51957 841 aa20.49■□□□□ 0.87
C1orf43-207ENST00000470180 SF3B3Q15393 1217 aaKnown RBP20.49■□□□□ 0.87
C1orf43-207ENST00000470180 TRAPPC3LQ5T215 181 aa20.49■□□□□ 0.87
C1orf43-207ENST00000470180 HELBQ8NG08 1087 aaPredicted RBP20.49■□□□□ 0.87
C1orf43-207ENST00000470180 MAP4K1Q92918 833 aa20.49■□□□□ 0.87
C1orf43-207ENST00000470180 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
C1orf43-207ENST00000470180 FGFR2P21802 821 aa20.48■□□□□ 0.87
C1orf43-207ENST00000470180 SCARF1Q14162 830 aa20.48■□□□□ 0.87
C1orf43-207ENST00000470180 NECTIN1Q15223 517 aa20.48■□□□□ 0.87
C1orf43-207ENST00000470180 TTC39AQ5SRH9 613 aa20.48■□□□□ 0.87
C1orf43-207ENST00000470180 ZNF589Q86UQ0 364 aaPredicted RBP20.48■□□□□ 0.87
C1orf43-207ENST00000470180 KCNB2Q92953 911 aa20.48■□□□□ 0.87
C1orf43-207ENST00000470180 SPEF2Q9C093 1822 aa20.48■□□□□ 0.87
C1orf43-207ENST00000470180 PHF14O94880 888 aa20.47■□□□□ 0.87
C1orf43-207ENST00000470180 MPHOSPH8Q99549 860 aa20.47■□□□□ 0.87
C1orf43-207ENST00000470180 RFC4P35249 363 aa20.47■□□□□ 0.87
C1orf43-207ENST00000470180 SLC27A3Q5K4L6 730 aa20.47■□□□□ 0.87
C1orf43-207ENST00000470180 TICAM2Q86XR7 235 aa20.47■□□□□ 0.87
C1orf43-207ENST00000470180 ABCC12Q96J65 1359 aa20.47■□□□□ 0.87
C1orf43-207ENST00000470180 TAF1P21675 1872 aa20.47■□□□□ 0.87
C1orf43-207ENST00000470180 UBR3Q6ZT12 1888 aa20.47■□□□□ 0.87
C1orf43-207ENST00000470180 AKAP11Q9UKA4 1901 aa20.47■□□□□ 0.87
C1orf43-207ENST00000470180 PROM2Q8N271 834 aa20.46■□□□□ 0.87
C1orf43-207ENST00000470180 SEC62Q99442 399 aaKnown RBP20.46■□□□□ 0.87
C1orf43-207ENST00000470180 NYXQ9GZU5 481 aa20.46■□□□□ 0.87
C1orf43-207ENST00000470180 TAF5LO75529 589 aa20.45■□□□□ 0.86
C1orf43-207ENST00000470180 NFKBIBQ15653 356 aa20.45■□□□□ 0.86
C1orf43-207ENST00000470180 SLFNL1Q499Z3 407 aa20.45■□□□□ 0.86
C1orf43-207ENST00000470180 ZNF512BQ96KM6 892 aaPredicted RBP20.45■□□□□ 0.86
C1orf43-207ENST00000470180 RBM8AQ9Y5S9 174 aaKnown RBP20.45■□□□□ 0.86
C1orf43-207ENST00000470180 SNAP23O00161 211 aa20.45■□□□□ 0.86
C1orf43-207ENST00000470180 IGHMBP2P38935 993 aaKnown RBP20.45■□□□□ 0.86
C1orf43-207ENST00000470180 PUM3Q15397 648 aaKnown RBP20.45■□□□□ 0.86
C1orf43-207ENST00000470180 NBPF5PQ86XG9 351 aaPredicted RBP20.45■□□□□ 0.86
C1orf43-207ENST00000470180 LPIN2Q92539 896 aa20.45■□□□□ 0.86
C1orf43-207ENST00000470180 CHMP5Q9NZZ3 219 aa20.45■□□□□ 0.86
C1orf43-207ENST00000470180 ADRA2BP18089 450 aa20.44■□□□□ 0.86
C1orf43-207ENST00000470180 GTF2E1P29083 439 aaPredicted RBP20.44■□□□□ 0.86
C1orf43-207ENST00000470180 ZAP70P43403 619 aa20.44■□□□□ 0.86
C1orf43-207ENST00000470180 FKBP4Q02790 459 aaKnown RBP eCLIP20.44■□□□□ 0.86
C1orf43-207ENST00000470180 MCMDC2Q4G0Z9 681 aa20.44■□□□□ 0.86
C1orf43-207ENST00000470180 PRPF40BQ6NWY9 871 aaKnown RBP20.44■□□□□ 0.86
C1orf43-207ENST00000470180 UPF3BQ9BZI7 483 aaKnown RBP20.44■□□□□ 0.86
C1orf43-207ENST00000470180 ARAP2Q8WZ64 1704 aa20.44■□□□□ 0.86
C1orf43-207ENST00000470180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.43■□□□□ 0.86
C1orf43-207ENST00000470180 PI16Q6UXB8 463 aa20.43■□□□□ 0.86
C1orf43-207ENST00000470180 TPTE2Q6XPS3 522 aa20.43■□□□□ 0.86
C1orf43-207ENST00000470180 FOXD4L1Q9NU39 408 aa20.43■□□□□ 0.86
C1orf43-207ENST00000470180 MCAMP43121 646 aa20.43■□□□□ 0.86
C1orf43-207ENST00000470180 ZMYM1Q5SVZ6 1142 aa20.43■□□□□ 0.86
C1orf43-207ENST00000470180 CCDC129Q6ZRS4 1044 aa20.43■□□□□ 0.86
C1orf43-207ENST00000470180 CDC5LQ99459 802 aaKnown RBP20.43■□□□□ 0.86
C1orf43-207ENST00000470180 PHKA1P46020 1223 aa20.42■□□□□ 0.86
C1orf43-207ENST00000470180 TXNRD1Q16881 649 aa20.42■□□□□ 0.86
C1orf43-207ENST00000470180 CREB3L3Q68CJ9 461 aa20.42■□□□□ 0.86
C1orf43-207ENST00000470180 CCDC102BQ68D86 513 aa20.42■□□□□ 0.86
C1orf43-207ENST00000470180 CCDC24Q8N4L8 307 aa20.42■□□□□ 0.86
C1orf43-207ENST00000470180 RNF113AO15541 343 aaKnown RBP20.41■□□□□ 0.86
C1orf43-207ENST00000470180 SSFA2P28290 1259 aa20.41■□□□□ 0.86
C1orf43-207ENST00000470180 CHRNDQ07001 517 aa20.41■□□□□ 0.86
C1orf43-207ENST00000470180 NFIXQ14938 502 aa20.41■□□□□ 0.86
C1orf43-207ENST00000470180 HELLSQ9NRZ9 838 aa20.41■□□□□ 0.86
C1orf43-207ENST00000470180 SLC27A2O14975 620 aa20.41■□□□□ 0.86
C1orf43-207ENST00000470180 HSP90AA1P07900 732 aaKnown RBP20.41■□□□□ 0.86
C1orf43-207ENST00000470180 ARID4AP29374 1257 aaPredicted RBP20.41■□□□□ 0.86
C1orf43-207ENST00000470180 MCM2P49736 904 aa20.41■□□□□ 0.86
C1orf43-207ENST00000470180 ADCK5Q3MIX3 580 aa20.41■□□□□ 0.86
C1orf43-207ENST00000470180 ANKRD18AQ8IVF6 992 aa20.41■□□□□ 0.86
C1orf43-207ENST00000470180 SLC5A1P13866 664 aa20.4■□□□□ 0.86
C1orf43-207ENST00000470180 IL27Q8NEV9 243 aa20.4■□□□□ 0.86
C1orf43-207ENST00000470180 TTC14Q96N46 770 aa20.4■□□□□ 0.86
C1orf43-207ENST00000470180 NLRP3Q96P20 1036 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms