RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 SRGAP3O43295 1099 aa10.15□□□□□ -0.78
NPHP3-204ENST00000469232 NUCB1Q02818 461 aa10.15□□□□□ -0.78
NPHP3-204ENST00000469232 PTPN12Q05209 780 aaKnown RBP10.15□□□□□ -0.78
NPHP3-204ENST00000469232 LMBR1LQ6UX01 489 aa10.15□□□□□ -0.78
NPHP3-204ENST00000469232 JARID2Q92833 1246 aaPredicted RBP10.15□□□□□ -0.78
NPHP3-204ENST00000469232 ZFP91Q96JP5 570 aaPredicted RBP10.15□□□□□ -0.78
NPHP3-204ENST00000469232 RAB11FIP3O75154 756 aa10.15□□□□□ -0.79
NPHP3-204ENST00000469232 TPTE2Q6XPS3 522 aa10.15□□□□□ -0.79
NPHP3-204ENST00000469232 ILDR2Q71H61 639 aa10.15□□□□□ -0.79
NPHP3-204ENST00000469232 CIAO1O76071 339 aa10.14□□□□□ -0.79
NPHP3-204ENST00000469232 CRY2Q49AN0 593 aa10.14□□□□□ -0.79
NPHP3-204ENST00000469232 ERFEQ4G0M1 354 aa10.14□□□□□ -0.79
NPHP3-204ENST00000469232 HSP90AB4PQ58FF6 505 aa10.14□□□□□ -0.79
NPHP3-204ENST00000469232 PRR5LQ6MZQ0 368 aa10.14□□□□□ -0.79
NPHP3-204ENST00000469232 SERPINB2P05120 415 aa10.13□□□□□ -0.79
NPHP3-204ENST00000469232 NBPF5PQ86XG9 351 aaPredicted RBP10.13□□□□□ -0.79
NPHP3-204ENST00000469232 PDZRN3Q9UPQ7 1066 aa10.13□□□□□ -0.79
NPHP3-204ENST00000469232 TNRC6CQ9HCJ0 1690 aaKnown RBP10.13□□□□□ -0.79
NPHP3-204ENST00000469232 SALL3Q9BXA9 1300 aa10.12□□□□□ -0.79
NPHP3-204ENST00000469232 HCLS1P14317 486 aaPredicted RBP10.12□□□□□ -0.79
NPHP3-204ENST00000469232 C3orf67Q6ZVT6 689 aa10.12□□□□□ -0.79
NPHP3-204ENST00000469232 ATG9AQ7Z3C6 839 aa10.12□□□□□ -0.79
NPHP3-204ENST00000469232 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
NPHP3-204ENST00000469232 CNBD1Q8NA66 436 aa10.12□□□□□ -0.79
NPHP3-204ENST00000469232 GREM2Q9H772 168 aa10.12□□□□□ -0.79
NPHP3-204ENST00000469232 ANKRD31Q8N7Z5 1873 aa10.12□□□□□ -0.79
NPHP3-204ENST00000469232 HOXA10P31260 410 aaPredicted RBP10.11□□□□□ -0.79
NPHP3-204ENST00000469232 FAM161AQ3B820 660 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 CCDC152Q4G0S7 254 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 RTL5Q5HYW3 569 aaPredicted RBP10.11□□□□□ -0.79
NPHP3-204ENST00000469232 BICDL1Q6ZP65 573 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 CHD1LQ86WJ1 897 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 ERC1Q8IUD2 1116 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 KIF1BPQ96EK5 621 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 GPR108Q9NPR9 543 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 EYA2O00167 538 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 SURF6O75683 361 aaKnown RBP10.11□□□□□ -0.79
NPHP3-204ENST00000469232 SASH1O94885 1247 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 MMP10P09238 476 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 ITGA6P23229 1130 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 PDE4AP27815 886 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 EFCAB3Q8N7B9 438 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 BRIP1Q9BX63 1249 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 PDGFDQ9GZP0 370 aaPredicted RBP10.11□□□□□ -0.79
NPHP3-204ENST00000469232 PA2G4Q9UQ80 394 aaKnown RBP10.11□□□□□ -0.79
NPHP3-204ENST00000469232 RIPOR2Q9Y4F9 1068 aa10.11□□□□□ -0.79
NPHP3-204ENST00000469232 COL4A1P02462 1669 aa10.1□□□□□ -0.79
NPHP3-204ENST00000469232 IL15P40933 162 aaPredicted RBP10.1□□□□□ -0.79
NPHP3-204ENST00000469232 IFIT5Q13325 482 aaKnown RBP10.1□□□□□ -0.79
NPHP3-204ENST00000469232 CCDC57Q2TAC2 916 aa10.1□□□□□ -0.79
NPHP3-204ENST00000469232 RHPN1Q8TCX5 695 aa10.1□□□□□ -0.79
NPHP3-204ENST00000469232 NLRP3Q96P20 1036 aa10.1□□□□□ -0.79
NPHP3-204ENST00000469232 OSBPL3Q9H4L5 887 aa10.1□□□□□ -0.79
NPHP3-204ENST00000469232 TAOK2Q9UL54 1235 aa10.1□□□□□ -0.79
NPHP3-204ENST00000469232 EXOC6BQ9Y2D4 811 aa10.1□□□□□ -0.79
NPHP3-204ENST00000469232 KIF13BQ9NQT8 1826 aa10.1□□□□□ -0.79
NPHP3-204ENST00000469232 C10orf71Q711Q0 1435 aa10.1□□□□□ -0.79
NPHP3-204ENST00000469232 ANKRD18BA2A2Z9 1011 aa10.09□□□□□ -0.79
NPHP3-204ENST00000469232 ST5P78524 1137 aa10.09□□□□□ -0.79
NPHP3-204ENST00000469232 VGLL2Q8N8G2 317 aa10.09□□□□□ -0.79
NPHP3-204ENST00000469232 LRRCC1Q9C099 1032 aa10.09□□□□□ -0.79
NPHP3-204ENST00000469232 STAP2Q9UGK3 403 aa10.09□□□□□ -0.79
NPHP3-204ENST00000469232 FAM177BA6PVY3 158 aa10.08□□□□□ -0.8
NPHP3-204ENST00000469232 G3BP1Q13283 466 aaKnown RBP eCLIP10.08□□□□□ -0.8
NPHP3-204ENST00000469232 ANKRD45Q5TZF3 282 aa10.08□□□□□ -0.8
NPHP3-204ENST00000469232 KLHDC4Q8TBB5 520 aa10.08□□□□□ -0.8
NPHP3-204ENST00000469232 MTFR1LQ9H019 292 aa10.08□□□□□ -0.8
NPHP3-204ENST00000469232 PARP3Q9Y6F1 533 aa10.08□□□□□ -0.8
NPHP3-204ENST00000469232 CRAMP1Q96RY5 1269 aa10.07□□□□□ -0.8
NPHP3-204ENST00000469232 CDC5LQ99459 802 aaKnown RBP10.07□□□□□ -0.8
NPHP3-204ENST00000469232 SEC31BQ9NQW1 1179 aa10.07□□□□□ -0.8
NPHP3-204ENST00000469232 BSDC1Q9NW68 430 aaPredicted RBP10.07□□□□□ -0.8
NPHP3-204ENST00000469232 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.07□□□□□ -0.8
NPHP3-204ENST00000469232 AOX1Q06278 1338 aa10.07□□□□□ -0.8
NPHP3-204ENST00000469232 LRRC37AA6NMS7 1700 aa10.07□□□□□ -0.8
NPHP3-204ENST00000469232 GTF2E1P29083 439 aaPredicted RBP10.07□□□□□ -0.8
NPHP3-204ENST00000469232 LRRC24Q50LG9 513 aa10.07□□□□□ -0.8
NPHP3-204ENST00000469232 PLEKHM2Q8IWE5 1019 aa10.07□□□□□ -0.8
NPHP3-204ENST00000469232 ZNF594Q96JF6 807 aaPredicted RBP10.07□□□□□ -0.8
NPHP3-204ENST00000469232 PUS3Q9BZE2 481 aaKnown RBP10.07□□□□□ -0.8
NPHP3-204ENST00000469232 LNPKQ9C0E8 428 aa10.07□□□□□ -0.8
NPHP3-204ENST00000469232 A0A1B0GUL6 1792 aa10.07□□□□□ -0.8
NPHP3-204ENST00000469232 COL11A2P13942 1736 aaPredicted RBP10.06□□□□□ -0.8
NPHP3-204ENST00000469232 KIAA1551Q9HCM1 1747 aa10.06□□□□□ -0.8
NPHP3-204ENST00000469232 SRGNP10124 158 aa10.06□□□□□ -0.8
NPHP3-204ENST00000469232 FGFR2P21802 821 aa10.06□□□□□ -0.8
NPHP3-204ENST00000469232 PDE6BP35913 854 aa10.06□□□□□ -0.8
NPHP3-204ENST00000469232 RPS8P62241 208 aaKnown RBP10.06□□□□□ -0.8
NPHP3-204ENST00000469232 MSL1Q68DK7 614 aa10.06□□□□□ -0.8
NPHP3-204ENST00000469232 DPY19L2Q6NUT2 758 aa10.06□□□□□ -0.8
NPHP3-204ENST00000469232 MROH5Q6ZUA9 1318 aa10.06□□□□□ -0.8
NPHP3-204ENST00000469232 DLEC1Q9Y238 1755 aa10.05□□□□□ -0.8
NPHP3-204ENST00000469232 ZNF609O15014 1411 aa10.05□□□□□ -0.8
NPHP3-204ENST00000469232 SMARCA5O60264 1052 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-204ENST00000469232 PTGER2P43116 358 aa10.05□□□□□ -0.8
NPHP3-204ENST00000469232 GRAPQ13588 217 aa10.05□□□□□ -0.8
NPHP3-204ENST00000469232 R3HDM1Q15032 1099 aaKnown RBP10.05□□□□□ -0.8
NPHP3-204ENST00000469232 LDHAL6AQ6ZMR3 332 aa10.05□□□□□ -0.8
NPHP3-204ENST00000469232 TMC4Q7Z404 712 aa10.05□□□□□ -0.8
NPHP3-204ENST00000469232 GRAPLQ8TC17 118 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms