RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 NEUROD6Q96NK8 337 aa18.29■□□□□ 0.52
CRAMP1-206ENST00000468839 C22orf23Q9BZE7 217 aa18.29■□□□□ 0.52
CRAMP1-206ENST00000468839 PDE8BO95263 885 aa18.28■□□□□ 0.52
CRAMP1-206ENST00000468839 C3orf67Q6ZVT6 689 aa18.28■□□□□ 0.52
CRAMP1-206ENST00000468839 COL23A1Q86Y22 540 aaPredicted RBP18.28■□□□□ 0.52
CRAMP1-206ENST00000468839 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
CRAMP1-206ENST00000468839 MPHOSPH8Q99549 860 aa18.28■□□□□ 0.52
CRAMP1-206ENST00000468839 MAP4K4O95819 1239 aaPredicted RBP18.27■□□□□ 0.52
CRAMP1-206ENST00000468839 RBM25P49756 843 aaKnown RBP18.27■□□□□ 0.52
CRAMP1-206ENST00000468839 BOLA2Q9H3K6 86 aa18.27■□□□□ 0.52
CRAMP1-206ENST00000468839 COL4A1P02462 1669 aa18.27■□□□□ 0.52
CRAMP1-206ENST00000468839 SERPINB2P05120 415 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 FGFR2P21802 821 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 EZH2Q15910 746 aaKnown RBP18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 ATP2B3Q16720 1220 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 PRR5LQ6MZQ0 368 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 TICAM2Q86XR7 235 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 ANKRD18AQ8IVF6 992 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 NLGN1Q8N2Q7 840 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 CNBD1Q8NA66 436 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 XAGE2Q96GT9 111 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 HAUS7Q99871 368 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 ESYT1Q9BSJ8 1104 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 ANKRD31Q8N7Z5 1873 aa18.26■□□□□ 0.51
CRAMP1-206ENST00000468839 REC8O95072 547 aa18.25■□□□□ 0.51
CRAMP1-206ENST00000468839 EN1Q05925 392 aaPredicted RBP18.25■□□□□ 0.51
CRAMP1-206ENST00000468839 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
CRAMP1-206ENST00000468839 BSDC1Q9NW68 430 aaPredicted RBP18.25■□□□□ 0.51
CRAMP1-206ENST00000468839 PNPLA7Q6ZV29 1317 aa18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 HIP1O00291 1037 aa18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 POLRMTO00411 1230 aaKnown RBP18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 EPB41L2O43491 1005 aaKnown RBP18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 BAG6P46379 1132 aa18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 SF3B2Q13435 895 aaKnown RBP18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 CCDC158Q5M9N0 1113 aa18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 ZNF512BQ96KM6 892 aaPredicted RBP18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 IPO9Q96P70 1041 aaKnown RBP18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 USP26Q9BXU7 913 aa18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 MYO5AQ9Y4I1 1855 aaKnown RBP18.24■□□□□ 0.51
CRAMP1-206ENST00000468839 RFX7Q2KHR2 1363 aa18.23■□□□□ 0.51
CRAMP1-206ENST00000468839 ST5P78524 1137 aa18.23■□□□□ 0.51
CRAMP1-206ENST00000468839 DDR1Q08345 913 aa18.23■□□□□ 0.51
CRAMP1-206ENST00000468839 PUM3Q15397 648 aaKnown RBP18.23■□□□□ 0.51
CRAMP1-206ENST00000468839 LPIN2Q92539 896 aa18.23■□□□□ 0.51
CRAMP1-206ENST00000468839 NPHP1O15259 732 aa18.22■□□□□ 0.51
CRAMP1-206ENST00000468839 IFIT1P09914 478 aaKnown RBP18.22■□□□□ 0.51
CRAMP1-206ENST00000468839 ADORA1P30542 326 aa18.22■□□□□ 0.51
CRAMP1-206ENST00000468839 RPS8P62241 208 aaKnown RBP18.22■□□□□ 0.51
CRAMP1-206ENST00000468839 SLC15A2Q16348 729 aa18.22■□□□□ 0.51
CRAMP1-206ENST00000468839 GORABQ5T7V8 394 aa18.22■□□□□ 0.51
CRAMP1-206ENST00000468839 RUFY2Q8WXA3 655 aa18.22■□□□□ 0.51
CRAMP1-206ENST00000468839 SLC5A1P13866 664 aa18.21■□□□□ 0.51
CRAMP1-206ENST00000468839 CHRNDQ07001 517 aa18.21■□□□□ 0.51
CRAMP1-206ENST00000468839 TTC39AQ5SRH9 613 aa18.21■□□□□ 0.51
CRAMP1-206ENST00000468839 DDX46Q7L014 1031 aaKnown RBP18.21■□□□□ 0.51
CRAMP1-206ENST00000468839 CCDC24Q8N4L8 307 aa18.21■□□□□ 0.51
CRAMP1-206ENST00000468839 CELF1Q92879 486 aaKnown RBP18.21■□□□□ 0.51
CRAMP1-206ENST00000468839 STK32BQ9NY57 414 aa18.21■□□□□ 0.51
CRAMP1-206ENST00000468839 MYH13Q9UKX3 1938 aa18.21■□□□□ 0.51
CRAMP1-206ENST00000468839 KLRG2A4D1S0 409 aaPredicted RBP18.2■□□□□ 0.5
CRAMP1-206ENST00000468839 SGSM2O43147 1006 aa18.2■□□□□ 0.5
CRAMP1-206ENST00000468839 CCDC125Q86Z20 511 aa18.2■□□□□ 0.5
CRAMP1-206ENST00000468839 HELBQ8NG08 1087 aaPredicted RBP18.2■□□□□ 0.5
CRAMP1-206ENST00000468839 MINPP1Q9UNW1 487 aa18.2■□□□□ 0.5
CRAMP1-206ENST00000468839 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
CRAMP1-206ENST00000468839 MSH5O43196 834 aa18.19■□□□□ 0.5
CRAMP1-206ENST00000468839 UBE4AQ14139 1066 aa18.19■□□□□ 0.5
CRAMP1-206ENST00000468839 CRY2Q49AN0 593 aa18.19■□□□□ 0.5
CRAMP1-206ENST00000468839 KBTBD3Q8NAB2 608 aa18.19■□□□□ 0.5
CRAMP1-206ENST00000468839 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
CRAMP1-206ENST00000468839 DIAPH3Q9NSV4 1193 aa18.19■□□□□ 0.5
CRAMP1-206ENST00000468839 TAF5LO75529 589 aa18.18■□□□□ 0.5
CRAMP1-206ENST00000468839 UQCRFS1P1P0C7P4 283 aa18.18■□□□□ 0.5
CRAMP1-206ENST00000468839 FSD1Q9BTV5 496 aa18.18■□□□□ 0.5
CRAMP1-206ENST00000468839 SNRKQ9NRH2 765 aa18.18■□□□□ 0.5
CRAMP1-206ENST00000468839 PAG1Q9NWQ8 432 aa18.18■□□□□ 0.5
CRAMP1-206ENST00000468839 EP400Q96L91 3159 aa18.18■□□□□ 0.5
CRAMP1-206ENST00000468839 ARID4AP29374 1257 aaPredicted RBP18.17■□□□□ 0.5
CRAMP1-206ENST00000468839 HOXA10P31260 410 aaPredicted RBP18.17■□□□□ 0.5
CRAMP1-206ENST00000468839 GRAPQ13588 217 aa18.17■□□□□ 0.5
CRAMP1-206ENST00000468839 GRAPLQ8TC17 118 aaPredicted RBP18.17■□□□□ 0.5
CRAMP1-206ENST00000468839 EDC3Q96F86 508 aaKnown RBP18.17■□□□□ 0.5
CRAMP1-206ENST00000468839 DNAJC2Q99543 621 aaKnown RBP18.17■□□□□ 0.5
CRAMP1-206ENST00000468839 ANKRD2Q9GZV1 360 aa18.17■□□□□ 0.5
CRAMP1-206ENST00000468839 RAD50Q92878 1312 aa18.17■□□□□ 0.5
CRAMP1-206ENST00000468839 CCDC102BQ68D86 513 aa18.16■□□□□ 0.5
CRAMP1-206ENST00000468839 CWC27Q6UX04 472 aaKnown RBP18.16■□□□□ 0.5
CRAMP1-206ENST00000468839 RBM17Q96I25 401 aaKnown RBP18.16■□□□□ 0.5
CRAMP1-206ENST00000468839 KIF2CQ99661 725 aa18.16■□□□□ 0.5
CRAMP1-206ENST00000468839 BRIP1Q9BX63 1249 aa18.16■□□□□ 0.5
CRAMP1-206ENST00000468839 IL25Q9H293 177 aa18.16■□□□□ 0.5
CRAMP1-206ENST00000468839 PARP3Q9Y6F1 533 aa18.16■□□□□ 0.5
CRAMP1-206ENST00000468839 LRRC37AA6NMS7 1700 aa18.15■□□□□ 0.5
CRAMP1-206ENST00000468839 GOLIM4O00461 696 aa18.15■□□□□ 0.5
CRAMP1-206ENST00000468839 NMIQ13287 307 aaPredicted RBP18.15■□□□□ 0.5
CRAMP1-206ENST00000468839 DEFB132Q7Z7B7 95 aa18.15■□□□□ 0.5
CRAMP1-206ENST00000468839 RPGRQ92834 1020 aaKnown RBP18.15■□□□□ 0.5
CRAMP1-206ENST00000468839 CRAMP1Q96RY5 1269 aa18.15■□□□□ 0.5
CRAMP1-206ENST00000468839 ZBTB22O15209 634 aa18.14■□□□□ 0.49
CRAMP1-206ENST00000468839 MCAMP43121 646 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms