RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 TRIM17Q9Y577 477 aa14.81□□□□□ -0.04
NEDD9-207ENST00000468612 PITPNM2Q9BZ72 1349 aa14.81□□□□□ -0.04
NEDD9-207ENST00000468612 ZNF609O15014 1411 aa14.81□□□□□ -0.04
NEDD9-207ENST00000468612 DDX60Q8IY21 1712 aaKnown RBP14.8□□□□□ -0.04
NEDD9-207ENST00000468612 SCN9AQ15858 1988 aa14.8□□□□□ -0.04
NEDD9-207ENST00000468612 SREBF2Q12772 1141 aa14.8□□□□□ -0.04
NEDD9-207ENST00000468612 DOK7Q18PE1 504 aa14.8□□□□□ -0.04
NEDD9-207ENST00000468612 OTUD5Q96G74 571 aa14.8□□□□□ -0.04
NEDD9-207ENST00000468612 EIF4A1P60842 406 aaKnown RBP14.79□□□□□ -0.04
NEDD9-207ENST00000468612 LRP10Q7Z4F1 713 aa14.79□□□□□ -0.04
NEDD9-207ENST00000468612 ARMC5Q96C12 935 aa14.79□□□□□ -0.04
NEDD9-207ENST00000468612 NSFL1CQ9UNZ2 370 aaKnown RBP14.79□□□□□ -0.04
NEDD9-207ENST00000468612 KDM3BQ7LBC6 1761 aa14.78□□□□□ -0.04
NEDD9-207ENST00000468612 ERBB4Q15303 1308 aa14.78□□□□□ -0.04
NEDD9-207ENST00000468612 C6orf229H3BNL8 230 aa14.78□□□□□ -0.04
NEDD9-207ENST00000468612 MKRN3Q13064 507 aaKnown RBP14.78□□□□□ -0.04
NEDD9-207ENST00000468612 SLC17A8Q8NDX2 589 aa14.78□□□□□ -0.04
NEDD9-207ENST00000468612 GPSM2P81274 684 aa14.77□□□□□ -0.05
NEDD9-207ENST00000468612 NLRP10Q86W26 655 aa14.77□□□□□ -0.05
NEDD9-207ENST00000468612 AGBL3Q8NEM8 1001 aa14.77□□□□□ -0.05
NEDD9-207ENST00000468612 NECTIN2Q92692 538 aa14.77□□□□□ -0.05
NEDD9-207ENST00000468612 EYA3Q99504 573 aa14.77□□□□□ -0.05
NEDD9-207ENST00000468612 SCAF8Q9UPN6 1271 aaKnown RBP14.77□□□□□ -0.05
NEDD9-207ENST00000468612 PTPN22Q9Y2R2 807 aa14.77□□□□□ -0.05
NEDD9-207ENST00000468612 ALDH1A1P00352 501 aa14.76□□□□□ -0.05
NEDD9-207ENST00000468612 PRAMEF18Q5VWM3 479 aa14.76□□□□□ -0.05
NEDD9-207ENST00000468612 PNISRQ8TF01 805 aaKnown RBP14.76□□□□□ -0.05
NEDD9-207ENST00000468612 CELF1Q92879 486 aaKnown RBP14.76□□□□□ -0.05
NEDD9-207ENST00000468612 GMLQ99445 158 aa14.76□□□□□ -0.05
NEDD9-207ENST00000468612 SH3TC1Q8TE82 1336 aa14.75□□□□□ -0.05
NEDD9-207ENST00000468612 H0YGN5 161 aa14.75□□□□□ -0.05
NEDD9-207ENST00000468612 PDIA6Q15084 440 aa14.75□□□□□ -0.05
NEDD9-207ENST00000468612 RSBN1LQ6PCB5 846 aaPredicted RBP14.75□□□□□ -0.05
NEDD9-207ENST00000468612 TBC1D16Q8TBP0 767 aa14.75□□□□□ -0.05
NEDD9-207ENST00000468612 THUMPD2Q9BTF0 503 aaKnown RBP14.75□□□□□ -0.05
NEDD9-207ENST00000468612 MYOZ2Q9NPC6 264 aa14.75□□□□□ -0.05
NEDD9-207ENST00000468612 TRMT112Q9UI30 125 aaKnown RBP14.75□□□□□ -0.05
NEDD9-207ENST00000468612 COL4A1P02462 1669 aa14.74□□□□□ -0.05
NEDD9-207ENST00000468612 PTPN12Q05209 780 aaKnown RBP14.74□□□□□ -0.05
NEDD9-207ENST00000468612 TTLL12Q14166 644 aaPredicted RBP14.74□□□□□ -0.05
NEDD9-207ENST00000468612 HSP90AB3PQ58FF7 597 aa14.73□□□□□ -0.05
NEDD9-207ENST00000468612 SPRYD7Q5W111 196 aa14.73□□□□□ -0.05
NEDD9-207ENST00000468612 USP17L8P0C7I0 530 aa14.72□□□□□ -0.05
NEDD9-207ENST00000468612 TCIRG1Q13488 830 aa14.72□□□□□ -0.05
NEDD9-207ENST00000468612 SF3B3Q15393 1217 aaKnown RBP14.72□□□□□ -0.05
NEDD9-207ENST00000468612 PROSER3Q2NL68 480 aa14.72□□□□□ -0.05
NEDD9-207ENST00000468612 LDLRAD1Q5T700 205 aa14.72□□□□□ -0.05
NEDD9-207ENST00000468612 IFNL1Q8IU54 200 aa14.72□□□□□ -0.05
NEDD9-207ENST00000468612 ERO1AQ96HE7 468 aa14.72□□□□□ -0.05
NEDD9-207ENST00000468612 ZNF333Q96JL9 665 aa14.72□□□□□ -0.05
NEDD9-207ENST00000468612 TMEM106CQ9BVX2 250 aa14.72□□□□□ -0.05
NEDD9-207ENST00000468612 ZC3H12CQ9C0D7 883 aaKnown RBP14.72□□□□□ -0.05
NEDD9-207ENST00000468612 PSME4Q14997 1843 aa14.71□□□□□ -0.05
NEDD9-207ENST00000468612 MANSC4A6NHS7 340 aaPredicted RBP14.71□□□□□ -0.05
NEDD9-207ENST00000468612 U2AF1L5P0DN76 240 aaPredicted RBP14.71□□□□□ -0.05
NEDD9-207ENST00000468612 INHBEP58166 350 aa14.71□□□□□ -0.05
NEDD9-207ENST00000468612 U2AF1Q01081 240 aaKnown RBP eCLIP14.71□□□□□ -0.05
NEDD9-207ENST00000468612 CAP1Q01518 475 aa14.71□□□□□ -0.05
NEDD9-207ENST00000468612 NBPF9Q3BBW0 867 aa14.71□□□□□ -0.05
NEDD9-207ENST00000468612 CHRDL2Q6WN34 429 aa14.71□□□□□ -0.05
NEDD9-207ENST00000468612 CD99L2Q8TCZ2 262 aa14.71□□□□□ -0.05
NEDD9-207ENST00000468612 PODXL2Q9NZ53 605 aa14.71□□□□□ -0.05
NEDD9-207ENST00000468612 NUDCQ9Y266 331 aa14.71□□□□□ -0.05
NEDD9-207ENST00000468612 LAMA3Q16787 3333 aa14.7□□□□□ -0.06
NEDD9-207ENST00000468612 IGF2BP3O00425 579 aaKnown RBP eCLIP14.7□□□□□ -0.06
NEDD9-207ENST00000468612 ANXA1P04083 346 aa14.7□□□□□ -0.06
NEDD9-207ENST00000468612 NF2P35240 595 aa14.7□□□□□ -0.06
NEDD9-207ENST00000468612 ARMC9Q7Z3E5 817 aa14.7□□□□□ -0.06
NEDD9-207ENST00000468612 CFAP53Q96M91 514 aa14.7□□□□□ -0.06
NEDD9-207ENST00000468612 EFCC1Q9HA90 598 aa14.7□□□□□ -0.06
NEDD9-207ENST00000468612 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
NEDD9-207ENST00000468612 LAMB1P07942 1786 aa14.68□□□□□ -0.06
NEDD9-207ENST00000468612 G3V3G9 751 aa14.68□□□□□ -0.06
NEDD9-207ENST00000468612 UFL1O94874 794 aa14.68□□□□□ -0.06
NEDD9-207ENST00000468612 DCAF8Q5TAQ9 597 aa14.68□□□□□ -0.06
NEDD9-207ENST00000468612 COPS6Q7L5N1 327 aa14.68□□□□□ -0.06
NEDD9-207ENST00000468612 MNX1P50219 401 aaPredicted RBP14.67□□□□□ -0.06
NEDD9-207ENST00000468612 RPS8P62241 208 aaKnown RBP14.67□□□□□ -0.06
NEDD9-207ENST00000468612 CRHR2Q13324 411 aa14.67□□□□□ -0.06
NEDD9-207ENST00000468612 PRKG1Q13976 671 aa14.67□□□□□ -0.06
NEDD9-207ENST00000468612 CNGB1Q14028 1251 aaPredicted RBP14.67□□□□□ -0.06
NEDD9-207ENST00000468612 XAGE3Q8WTP9 111 aa14.67□□□□□ -0.06
NEDD9-207ENST00000468612 PRO3102Q9H379 93 aa14.67□□□□□ -0.06
NEDD9-207ENST00000468612 GGA1Q9UJY5 639 aa14.67□□□□□ -0.06
NEDD9-207ENST00000468612 USP17L3A6NCW0 530 aa14.66□□□□□ -0.06
NEDD9-207ENST00000468612 USP17L4A6NCW7 530 aa14.66□□□□□ -0.06
NEDD9-207ENST00000468612 WNT10BO00744 389 aa14.66□□□□□ -0.06
NEDD9-207ENST00000468612 ZBTB48P10074 688 aaPredicted RBP14.66□□□□□ -0.06
NEDD9-207ENST00000468612 EIF2S2P20042 333 aaKnown RBP14.66□□□□□ -0.06
NEDD9-207ENST00000468612 USP17L1Q7RTZ2 530 aa14.66□□□□□ -0.06
NEDD9-207ENST00000468612 ZNF428Q96B54 188 aa14.66□□□□□ -0.06
NEDD9-207ENST00000468612 DLG5Q8TDM6 1919 aa14.66□□□□□ -0.06
NEDD9-207ENST00000468612 SP3Q02447 781 aa14.65□□□□□ -0.06
NEDD9-207ENST00000468612 AIMP1Q12904 312 aaKnown RBP14.65□□□□□ -0.06
NEDD9-207ENST00000468612 SLC4A8Q2Y0W8 1093 aa14.65□□□□□ -0.06
NEDD9-207ENST00000468612 NBPF11Q86T75 865 aa14.65□□□□□ -0.06
NEDD9-207ENST00000468612 SLC10A4Q96EP9 437 aa14.65□□□□□ -0.06
NEDD9-207ENST00000468612 FAM89AQ96GI7 184 aa14.65□□□□□ -0.06
NEDD9-207ENST00000468612 WNK4Q96J92 1243 aa14.65□□□□□ -0.06
NEDD9-207ENST00000468612 ANKIB1Q9P2G1 1089 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms