RNA–Protein interactions for RNA: ENST00000468476.1

PABPC4-209, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 3,592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-209ENST00000468476 RUFY2Q8WXA3 655 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 NOL10Q9BSC4 688 aaKnown RBP10.62□□□□□ -0.71
PABPC4-209ENST00000468476 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
PABPC4-209ENST00000468476 CCDC172P0C7W6 258 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 WASHC4Q2M389 1173 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 CCDC129Q6ZRS4 1044 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 HELBQ8NG08 1087 aaPredicted RBP10.62□□□□□ -0.71
PABPC4-209ENST00000468476 NGLY1Q96IV0 654 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 USP25Q9UHP3 1055 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.62□□□□□ -0.71
PABPC4-209ENST00000468476 SASH1O94885 1247 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 STARD3NLO95772 234 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 DEF6Q9H4E7 631 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 CTNNA3Q9UI47 895 aa10.62□□□□□ -0.71
PABPC4-209ENST00000468476 PHF14O94880 888 aa10.61□□□□□ -0.71
PABPC4-209ENST00000468476 EGFL6Q8IUX8 553 aa10.61□□□□□ -0.71
PABPC4-209ENST00000468476 PIGBQ92521 554 aa10.61□□□□□ -0.71
PABPC4-209ENST00000468476 NMIQ13287 307 aaPredicted RBP10.61□□□□□ -0.71
PABPC4-209ENST00000468476 NEK11Q8NG66 645 aa10.61□□□□□ -0.71
PABPC4-209ENST00000468476 TMX3Q96JJ7 454 aa10.61□□□□□ -0.71
PABPC4-209ENST00000468476 CNNM1Q9NRU3 951 aa10.61□□□□□ -0.71
PABPC4-209ENST00000468476 TRMT112Q9UI30 125 aaKnown RBP10.61□□□□□ -0.71
PABPC4-209ENST00000468476 DDX41Q9UJV9 622 aaKnown RBP10.61□□□□□ -0.71
PABPC4-209ENST00000468476 NFAT5O94916 1531 aa10.61□□□□□ -0.71
PABPC4-209ENST00000468476 VPS37CA5D8V6 355 aaPredicted RBP10.61□□□□□ -0.71
PABPC4-209ENST00000468476 UBAP1LF5GYI3 381 aa10.61□□□□□ -0.71
PABPC4-209ENST00000468476 POLR3GO15318 223 aaPredicted RBP10.61□□□□□ -0.71
PABPC4-209ENST00000468476 ZKSCAN1P17029 563 aaPredicted RBP10.61□□□□□ -0.71
PABPC4-209ENST00000468476 LRRC2Q9BYS8 371 aa10.61□□□□□ -0.71
PABPC4-209ENST00000468476 KDM6AO15550 1401 aaPredicted RBP10.6□□□□□ -0.71
PABPC4-209ENST00000468476 LRRC24Q50LG9 513 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 CCDC24Q8N4L8 307 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 SPC24Q8NBT2 197 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 KAZALD1Q96I82 304 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 PUS3Q9BZE2 481 aaKnown RBP10.6□□□□□ -0.71
PABPC4-209ENST00000468476 PTH1RQ03431 593 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 NECAB1Q8N987 351 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 PLBD2Q8NHP8 589 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 SEC62Q99442 399 aaKnown RBP10.6□□□□□ -0.71
PABPC4-209ENST00000468476 NWD1Q149M9 1564 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 NCBP1Q09161 790 aaKnown RBP10.6□□□□□ -0.71
PABPC4-209ENST00000468476 POLA2Q14181 598 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 DDB1Q16531 1140 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 CCDC83Q8IWF9 413 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 CEP126Q9P2H0 1117 aa10.6□□□□□ -0.71
PABPC4-209ENST00000468476 FAM98CQ17RN3 349 aaKnown RBP10.59□□□□□ -0.71
PABPC4-209ENST00000468476 PI4K2BQ8TCG2 481 aa10.59□□□□□ -0.71
PABPC4-209ENST00000468476 ANKRD7Q92527 254 aa10.59□□□□□ -0.71
PABPC4-209ENST00000468476 GTF3C6Q969F1 213 aa10.59□□□□□ -0.71
PABPC4-209ENST00000468476 SYT10Q6XYQ8 523 aa10.59□□□□□ -0.71
PABPC4-209ENST00000468476 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
PABPC4-209ENST00000468476 SNX21Q969T3 373 aa10.59□□□□□ -0.71
PABPC4-209ENST00000468476 ATP6V1AP38606 617 aa10.59□□□□□ -0.71
PABPC4-209ENST00000468476 LRSAM1Q6UWE0 723 aa10.59□□□□□ -0.71
PABPC4-209ENST00000468476 KRBA2Q6ZNG9 492 aa10.59□□□□□ -0.71
PABPC4-209ENST00000468476 C16orf45Q96MC5 204 aaPredicted RBP10.59□□□□□ -0.71
PABPC4-209ENST00000468476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.59□□□□□ -0.71
PABPC4-209ENST00000468476 HCLS1P14317 486 aaPredicted RBP10.58□□□□□ -0.72
PABPC4-209ENST00000468476 GRIPAP1Q4V328 841 aa10.58□□□□□ -0.72
PABPC4-209ENST00000468476 MEX3CQ5U5Q3 659 aaKnown RBP10.58□□□□□ -0.72
PABPC4-209ENST00000468476 CTR9Q6PD62 1173 aa10.58□□□□□ -0.72
PABPC4-209ENST00000468476 IQSEC3Q9UPP2 1182 aaPredicted RBP10.58□□□□□ -0.72
PABPC4-209ENST00000468476 CASQ1P31415 396 aa10.58□□□□□ -0.72
PABPC4-209ENST00000468476 NOP2P46087 812 aaKnown RBP10.58□□□□□ -0.72
PABPC4-209ENST00000468476 METTL24Q5JXM2 366 aa10.58□□□□□ -0.72
PABPC4-209ENST00000468476 FERMT3Q86UX7 667 aa10.58□□□□□ -0.72
PABPC4-209ENST00000468476 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
PABPC4-209ENST00000468476 TSPY26PQ9H489 355 aa10.58□□□□□ -0.72
PABPC4-209ENST00000468476 ZBTB1Q9Y2K1 713 aa10.58□□□□□ -0.72
PABPC4-209ENST00000468476 TTC39AQ5SRH9 613 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 KIF18AQ8NI77 898 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 RNF217Q8TC41 542 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 EVI5LQ96CN4 794 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 SMC3Q9UQE7 1217 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 JRKLQ9Y4A0 524 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 RBM8AQ9Y5S9 174 aaKnown RBP10.57□□□□□ -0.72
PABPC4-209ENST00000468476 A0A0D9SFI3 127 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 IFIT1P09914 478 aaKnown RBP10.57□□□□□ -0.72
PABPC4-209ENST00000468476 SATB1Q01826 763 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 HLFQ16534 295 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 LDHAL6AQ6ZMR3 332 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 CHST3Q7LGC8 479 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 RAB11FIP4Q86YS3 637 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 OSBPL3Q9H4L5 887 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 PDRG1Q9NUG6 133 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 SNAP23O00161 211 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 SGSM2O43147 1006 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 HAND2P61296 217 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 SEMA3FQ13275 785 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 IFIT5Q13325 482 aaKnown RBP10.57□□□□□ -0.72
PABPC4-209ENST00000468476 TNNI3KQ59H18 835 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 CCDC112Q8NEF3 446 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 DBNLQ9UJU6 430 aaKnown RBP10.57□□□□□ -0.72
PABPC4-209ENST00000468476 FPGT-TNNI3KV9GXZ4 949 aa10.57□□□□□ -0.72
PABPC4-209ENST00000468476 ERVV-2B6SEH9 535 aa10.56□□□□□ -0.72
PABPC4-209ENST00000468476 MYO1CO00159 1063 aa10.56□□□□□ -0.72
PABPC4-209ENST00000468476 IRF6O14896 467 aa10.56□□□□□ -0.72
PABPC4-209ENST00000468476 TEX35Q5T0J7 233 aa10.56□□□□□ -0.72
PABPC4-209ENST00000468476 HEG1Q9ULI3 1381 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms