RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 RFX5P48382 616 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-211ENST00000468468 PTPN12Q05209 780 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-211ENST00000468468 NEK1Q96PY6 1258 aa18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 COL15A1P39059 1388 aa18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 TYRO3Q06418 890 aa18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 UBE3BQ7Z3V4 1068 aa18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 SPC24Q8NBT2 197 aa18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 MYRIPQ8NFW9 859 aa18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 FAM200AQ8TCP9 573 aa18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 DNAJC2Q99543 621 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 TNMDQ9H2S6 317 aa18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 DACT1Q9NYF0 836 aa18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 MRVI1Q9Y6F6 885 aa18.68■□□□□ 0.58
TSPAN4-211ENST00000468468 CCDC129Q6ZRS4 1044 aa18.67■□□□□ 0.58
TSPAN4-211ENST00000468468 LEO1Q8WVC0 666 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-211ENST00000468468 JAK2O60674 1132 aa18.67■□□□□ 0.58
TSPAN4-211ENST00000468468 CHGBP05060 677 aa18.67■□□□□ 0.58
TSPAN4-211ENST00000468468 GLI3P10071 1580 aa18.67■□□□□ 0.58
TSPAN4-211ENST00000468468 CKAP2LQ8IYA6 745 aa18.67■□□□□ 0.58
TSPAN4-211ENST00000468468 SPTLC3Q9NUV7 552 aa18.67■□□□□ 0.58
TSPAN4-211ENST00000468468 ATP5J2-PTCD1G3V325 749 aa18.66■□□□□ 0.58
TSPAN4-211ENST00000468468 PTCD1O75127 700 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-211ENST00000468468 PDE4CQ08493 712 aa18.66■□□□□ 0.58
TSPAN4-211ENST00000468468 GTF3C6Q969F1 213 aa18.66■□□□□ 0.58
TSPAN4-211ENST00000468468 PRIMPOLQ96LW4 560 aa18.66■□□□□ 0.58
TSPAN4-211ENST00000468468 SEC62Q99442 399 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-211ENST00000468468 Q6ZUG5 572 aa18.66■□□□□ 0.58
TSPAN4-211ENST00000468468 DBNDD2Q9BQY9 259 aa18.66■□□□□ 0.58
TSPAN4-211ENST00000468468 U3KPZ7 1027 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-211ENST00000468468 NBPF26B4DH59 902 aa18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 TPM3P06753 285 aa18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 HSP90B1P14625 803 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 NBPF14Q5TI25 921 aa18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 NBPF10Q6P3W6 841 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 NBPF15Q8N660 670 aa18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 NHSL1Q5SYE7 1610 aa18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 ZNF609O15014 1411 aa18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 GOLGA6L6A8MZA4 724 aa18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 KCNF1Q9H3M0 494 aa18.65■□□□□ 0.58
TSPAN4-211ENST00000468468 A0A087WZG4 1122 aa18.64■□□□□ 0.58
TSPAN4-211ENST00000468468 HMGN5P82970 282 aaKnown RBP18.64■□□□□ 0.58
TSPAN4-211ENST00000468468 RABL6Q3YEC7 729 aaPredicted RBP18.64■□□□□ 0.58
TSPAN4-211ENST00000468468 MCMDC2Q4G0Z9 681 aa18.64■□□□□ 0.58
TSPAN4-211ENST00000468468 LUZP1Q86V48 1076 aa18.64■□□□□ 0.58
TSPAN4-211ENST00000468468 BRF1Q92994 677 aa18.64■□□□□ 0.58
TSPAN4-211ENST00000468468 DDX19AQ9NUU7 478 aaKnown RBP18.64■□□□□ 0.58
TSPAN4-211ENST00000468468 NKX1-1Q15270 411 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-211ENST00000468468 MTERF4Q7Z6M4 381 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-211ENST00000468468 CYP21A2P08686 494 aa18.64■□□□□ 0.57
TSPAN4-211ENST00000468468 DDX46Q7L014 1031 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-211ENST00000468468 KIAA1524Q8TCG1 905 aa18.64■□□□□ 0.57
TSPAN4-211ENST00000468468 HAUS7Q99871 368 aa18.64■□□□□ 0.57
TSPAN4-211ENST00000468468 BTG4Q9NY30 223 aa18.64■□□□□ 0.57
TSPAN4-211ENST00000468468 PYCARDQ9ULZ3 195 aa18.64■□□□□ 0.57
TSPAN4-211ENST00000468468 A1BGP04217 495 aa18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 ANO6Q4KMQ2 910 aa18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 BICD2Q8TD16 824 aa18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 CCDC9Q9Y3X0 531 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 H3BQV1 296 aa18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 RESTQ13127 1097 aa18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 IFFO2Q5TF58 517 aa18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 DDX11Q96FC9 970 aa18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 PGBD1Q96JS3 809 aa18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 CLSTN2Q9H4D0 955 aa18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 CBX8Q9HC52 389 aa18.63■□□□□ 0.57
TSPAN4-211ENST00000468468 RFX7Q2KHR2 1363 aa18.62■□□□□ 0.57
TSPAN4-211ENST00000468468 LRRC2Q9BYS8 371 aa18.62■□□□□ 0.57
TSPAN4-211ENST00000468468 NR1I2O75469 434 aa18.62■□□□□ 0.57
TSPAN4-211ENST00000468468 TTLL7Q6ZT98 887 aa18.62■□□□□ 0.57
TSPAN4-211ENST00000468468 SHANK3Q9BYB0 1731 aa18.61■□□□□ 0.57
TSPAN4-211ENST00000468468 LMBR1LQ6UX01 489 aa18.61■□□□□ 0.57
TSPAN4-211ENST00000468468 RBM43Q6ZSC3 357 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-211ENST00000468468 PLBD2Q8NHP8 589 aa18.61■□□□□ 0.57
TSPAN4-211ENST00000468468 KCPQ6ZWJ8 1503 aa18.6■□□□□ 0.57
TSPAN4-211ENST00000468468 KBTBD3Q8NAB2 608 aa18.6■□□□□ 0.57
TSPAN4-211ENST00000468468 SCRN1Q12765 414 aa18.6■□□□□ 0.57
TSPAN4-211ENST00000468468 ZSCAN16Q9H4T2 348 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-211ENST00000468468 CASP7P55210 303 aa18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 SMAP1Q8IYB5 467 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 TSC1Q92574 1164 aa18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 LAMB4A4D0S4 1761 aa18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 AFDNP55196 1824 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 PTGS1P23219 599 aa18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 NEUROD6Q96NK8 337 aa18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 ARFGEF2Q9Y6D5 1785 aa18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 GTF2F1P35269 517 aaKnown RBP eCLIP18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 CFAP45Q9UL16 551 aa18.59■□□□□ 0.57
TSPAN4-211ENST00000468468 SLFNL1Q499Z3 407 aa18.58■□□□□ 0.56
TSPAN4-211ENST00000468468 DRC7Q8IY82 874 aa18.58■□□□□ 0.56
TSPAN4-211ENST00000468468 SMARCC2Q8TAQ2 1214 aa18.58■□□□□ 0.56
TSPAN4-211ENST00000468468 ZBTB3Q9H5J0 574 aa18.58■□□□□ 0.56
TSPAN4-211ENST00000468468 SH3TC1Q8TE82 1336 aa18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 GOLIM4O00461 696 aa18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 PFKFB2O60825 505 aa18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 HMGB1P09429 215 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 FOSBP53539 338 aa18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 CEBPZQ03701 1054 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 DHX32Q7L7V1 743 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms