RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 CCDC61Q9Y6R9 512 aa10.74□□□□□ -0.69
LCA5-203ENST00000467898 RGPD8O14715 1765 aaPredicted RBP10.74□□□□□ -0.69
LCA5-203ENST00000467898 PREPLQ4J6C6 727 aaPredicted RBP10.74□□□□□ -0.69
LCA5-203ENST00000467898 HSP90B2PQ58FF3 399 aa10.74□□□□□ -0.69
LCA5-203ENST00000467898 DZIP3Q86Y13 1208 aaKnown RBP10.74□□□□□ -0.69
LCA5-203ENST00000467898 MICAL1Q8TDZ2 1067 aa10.74□□□□□ -0.69
LCA5-203ENST00000467898 N4BP2L2Q92802 583 aaPredicted RBP10.74□□□□□ -0.69
LCA5-203ENST00000467898 LZTS2Q9BRK4 669 aa10.74□□□□□ -0.69
LCA5-203ENST00000467898 RLBP1P12271 317 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 FBLN1P23142 703 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 CCDC183Q5T5S1 534 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 NFXL1Q6ZNB6 911 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 NME9Q86XW9 330 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 ACRBPQ8NEB7 543 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 GOPCQ9HD26 462 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 CEP126Q9P2H0 1117 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 ZRANB1Q9UGI0 708 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 BLOC1S6Q9UL45 172 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 SPTY2D1Q68D10 685 aaPredicted RBP10.73□□□□□ -0.69
LCA5-203ENST00000467898 LRRC31Q6UY01 552 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 KIAA1328Q86T90 577 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 SUN2Q9UH99 717 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 TBX22Q9Y458 520 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 SSH2Q76I76 1423 aa10.73□□□□□ -0.69
LCA5-203ENST00000467898 CHUKO15111 745 aa10.72□□□□□ -0.69
LCA5-203ENST00000467898 CCNHP51946 323 aaPredicted RBP10.72□□□□□ -0.69
LCA5-203ENST00000467898 SCRN1Q12765 414 aa10.72□□□□□ -0.69
LCA5-203ENST00000467898 PTPN14Q15678 1187 aa10.72□□□□□ -0.69
LCA5-203ENST00000467898 SLX1AQ9BQ83 275 aa10.72□□□□□ -0.69
LCA5-203ENST00000467898 TRIM35Q9UPQ4 493 aa10.72□□□□□ -0.69
LCA5-203ENST00000467898 DIAPH1O60610 1272 aaKnown RBP10.72□□□□□ -0.69
LCA5-203ENST00000467898 PPFIA4O75335 1185 aa10.72□□□□□ -0.69
LCA5-203ENST00000467898 CD2BP2O95400 341 aaKnown RBP10.72□□□□□ -0.69
LCA5-203ENST00000467898 RASA3Q14644 834 aa10.72□□□□□ -0.69
LCA5-203ENST00000467898 KCNV1Q6PIU1 500 aa10.72□□□□□ -0.69
LCA5-203ENST00000467898 PROCA1Q8NCQ7 364 aaPredicted RBP10.72□□□□□ -0.69
LCA5-203ENST00000467898 BICD2Q8TD16 824 aa10.72□□□□□ -0.69
LCA5-203ENST00000467898 WLSQ5T9L3 541 aa10.71□□□□□ -0.69
LCA5-203ENST00000467898 OVOS2A0A0J9YW53 1432 aa10.71□□□□□ -0.69
LCA5-203ENST00000467898 OVOS2Q6IE36 1432 aa10.71□□□□□ -0.69
LCA5-203ENST00000467898 PEAK1Q9H792 1746 aa10.71□□□□□ -0.69
LCA5-203ENST00000467898 TMPOP42166 694 aaKnown RBP10.71□□□□□ -0.69
LCA5-203ENST00000467898 IQCGQ9H095 443 aaKnown RBP10.71□□□□□ -0.69
LCA5-203ENST00000467898 NSFL1CQ9UNZ2 370 aaKnown RBP10.71□□□□□ -0.69
LCA5-203ENST00000467898 EID1Q9Y6B2 187 aa10.71□□□□□ -0.69
LCA5-203ENST00000467898 ATXN2Q99700 1313 aaKnown RBP10.71□□□□□ -0.7
LCA5-203ENST00000467898 PLEKHG3A1L390 1219 aa10.71□□□□□ -0.7
LCA5-203ENST00000467898 H7C1W4 665 aa10.71□□□□□ -0.7
LCA5-203ENST00000467898 CASTP20810 708 aaKnown RBP10.71□□□□□ -0.7
LCA5-203ENST00000467898 SLC8A3P57103 927 aa10.71□□□□□ -0.7
LCA5-203ENST00000467898 CPLX2Q6PUV4 134 aaKnown RBP10.71□□□□□ -0.7
LCA5-203ENST00000467898 CABS1Q96KC9 395 aa10.71□□□□□ -0.7
LCA5-203ENST00000467898 RMI1Q9H9A7 625 aa10.71□□□□□ -0.7
LCA5-203ENST00000467898 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.7
LCA5-203ENST00000467898 FMN2Q9NZ56 1722 aa10.7□□□□□ -0.7
LCA5-203ENST00000467898 USP6P35125 1406 aa10.7□□□□□ -0.7
LCA5-203ENST00000467898 CHD2O14647 1828 aaKnown RBP10.7□□□□□ -0.7
LCA5-203ENST00000467898 CCDC158Q5M9N0 1113 aa10.7□□□□□ -0.7
LCA5-203ENST00000467898 RCSD1Q6JBY9 416 aa10.7□□□□□ -0.7
LCA5-203ENST00000467898 PRPF38AQ8NAV1 312 aaKnown RBP10.7□□□□□ -0.7
LCA5-203ENST00000467898 PLEKHG4BQ96PX9 1271 aa10.7□□□□□ -0.7
LCA5-203ENST00000467898 AMOTL2Q9Y2J4 779 aa10.7□□□□□ -0.7
LCA5-203ENST00000467898 MARF1Q9Y4F3 1742 aaKnown RBP10.7□□□□□ -0.7
LCA5-203ENST00000467898 THEMISQ8N1K5 641 aaPredicted RBP10.7□□□□□ -0.7
LCA5-203ENST00000467898 JPH2Q9BR39 696 aaPredicted RBP10.7□□□□□ -0.7
LCA5-203ENST00000467898 ODF2LQ9ULJ1 636 aa10.7□□□□□ -0.7
LCA5-203ENST00000467898 EMILIN1Q9Y6C2 1016 aa10.7□□□□□ -0.7
LCA5-203ENST00000467898 RGPD1P0DJD0 1748 aa10.7□□□□□ -0.7
LCA5-203ENST00000467898 DLG5Q8TDM6 1919 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 PTGS1P23219 599 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 IL13P35225 146 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 RARSP54136 660 aaKnown RBP10.69□□□□□ -0.7
LCA5-203ENST00000467898 KAT2BQ92831 832 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 TBC1D8O95759 1140 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 ALDH1B1P30837 517 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 RAB27AP51159 221 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 FILIP1LQ4L180 1135 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 HHATQ5VTY9 493 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 ZSCAN25Q6NSZ9 544 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 AGAP3Q96P47 875 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 UBA5Q9GZZ9 404 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.69□□□□□ -0.7
LCA5-203ENST00000467898 USP54Q70EL1 1684 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 ACEP12821 1306 aa10.69□□□□□ -0.7
LCA5-203ENST00000467898 AP1G2O75843 785 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 ECEL1O95672 775 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 GCKP35557 465 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 ARHGAP29Q52LW3 1261 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 CCDC93Q567U6 631 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 NBPF15Q8N660 670 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 TMEM87AQ8NBN3 555 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 SNRNP27Q8WVK2 155 aaKnown RBP10.68□□□□□ -0.7
LCA5-203ENST00000467898 BATF3Q9NR55 127 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 ORC3Q9UBD5 711 aaPredicted RBP10.68□□□□□ -0.7
LCA5-203ENST00000467898 TTC21BQ7Z4L5 1316 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 FCHSD2O94868 740 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 HCLS1P14317 486 aaPredicted RBP10.68□□□□□ -0.7
LCA5-203ENST00000467898 MX1P20591 662 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 ERCC6LQ2NKX8 1250 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms