RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 VEGFBP49765 207 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 TBC1D9Q6ZT07 1266 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 KDF1Q8NAX2 398 aaPredicted RBP6.88□□□□□ -1.31
TRIM27-204ENST00000467742 PLPP7Q8NBV4 271 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 NGDNQ8NEJ9 315 aaKnown RBP6.88□□□□□ -1.31
TRIM27-204ENST00000467742 RNF217Q8TC41 542 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 INSM2Q96T92 566 aaPredicted RBP6.88□□□□□ -1.31
TRIM27-204ENST00000467742 POLMQ9NP87 494 aaPredicted RBP6.88□□□□□ -1.31
TRIM27-204ENST00000467742 TFIP11Q9UBB9 837 aaKnown RBP6.88□□□□□ -1.31
TRIM27-204ENST00000467742 DOLKQ9UPQ8 538 aa6.88□□□□□ -1.31
TRIM27-204ENST00000467742 BCL9LQ86UU0 1499 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 NSD3Q9BZ95 1437 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 NINLQ9Y2I6 1382 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 KIF7Q2M1P5 1343 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 USP17L5A8MUK1 530 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 ATP5J2-PTCD1G3V325 749 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 PPFIA3O75145 1194 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 TMF1P82094 1093 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 PTSQ03393 145 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 EML3Q32P44 896 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 FOXD4L5Q5VV16 416 aaPredicted RBP6.87□□□□□ -1.31
TRIM27-204ENST00000467742 CYP2U1Q7Z449 544 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 LRRC59Q96AG4 307 aaKnown RBP6.87□□□□□ -1.31
TRIM27-204ENST00000467742 SLC12A5Q9H2X9 1139 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 ZNF395Q9H8N7 513 aaPredicted RBP6.87□□□□□ -1.31
TRIM27-204ENST00000467742 RGS17Q9UGC6 210 aaPredicted RBP6.87□□□□□ -1.31
TRIM27-204ENST00000467742 PCDHB11Q9Y5F2 797 aa6.87□□□□□ -1.31
TRIM27-204ENST00000467742 MAFBQ9Y5Q3 323 aaPredicted RBP6.87□□□□□ -1.31
TRIM27-204ENST00000467742 VIRMAQ69YN4 1812 aaKnown RBP6.87□□□□□ -1.31
TRIM27-204ENST00000467742 PARP4Q9UKK3 1724 aaKnown RBP6.87□□□□□ -1.31
TRIM27-204ENST00000467742 CCDC7Q96M83 1385 aa6.86□□□□□ -1.31
TRIM27-204ENST00000467742 ERBB4Q15303 1308 aa6.86□□□□□ -1.31
TRIM27-204ENST00000467742 TTC21BQ7Z4L5 1316 aa6.86□□□□□ -1.31
TRIM27-204ENST00000467742 PIK3CDO00329 1044 aa6.86□□□□□ -1.31
TRIM27-204ENST00000467742 LMOD1P29536 600 aaPredicted RBP6.86□□□□□ -1.31
TRIM27-204ENST00000467742 GPC1P35052 558 aa6.86□□□□□ -1.31
TRIM27-204ENST00000467742 PSME1Q06323 249 aa6.86□□□□□ -1.31
TRIM27-204ENST00000467742 NUTM2GQ5VZR2 741 aa6.86□□□□□ -1.31
TRIM27-204ENST00000467742 ARID3AQ99856 593 aa6.86□□□□□ -1.31
TRIM27-204ENST00000467742 BRD4O60885 1362 aaPredicted RBP6.85□□□□□ -1.31
TRIM27-204ENST00000467742 KIAA0232Q92628 1395 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 RGPD1P0DJD0 1748 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 WASHC2AQ641Q2 1341 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 USP17L3A6NCW0 530 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 USP17L4A6NCW7 530 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 FIGNL2A6NMB9 653 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 ADAMTS2O95450 1211 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 GMPRP36959 345 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 RNF144AP50876 292 aaPredicted RBP6.85□□□□□ -1.31
TRIM27-204ENST00000467742 USP4Q13107 963 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 USP17L2Q6R6M4 530 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 USP17L1Q7RTZ2 530 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 NME9Q86XW9 330 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 TMC1Q8TDI8 760 aa6.85□□□□□ -1.31
TRIM27-204ENST00000467742 CCDC85AQ96PX6 553 aaPredicted RBP6.85□□□□□ -1.31
TRIM27-204ENST00000467742 COL5A2P05997 1499 aaPredicted RBP6.85□□□□□ -1.31
TRIM27-204ENST00000467742 ATRNO75882 1429 aa6.84□□□□□ -1.31
TRIM27-204ENST00000467742 TNS1Q9HBL0 1735 aaKnown RBP6.84□□□□□ -1.31
TRIM27-204ENST00000467742 USP31Q70CQ4 1352 aa6.84□□□□□ -1.31
TRIM27-204ENST00000467742 AFF2P51816 1311 aa6.84□□□□□ -1.31
TRIM27-204ENST00000467742 SLC35F4A4IF30 521 aa6.84□□□□□ -1.31
TRIM27-204ENST00000467742 MYCP01106 439 aaPredicted RBP6.84□□□□□ -1.31
TRIM27-204ENST00000467742 SCTRP47872 440 aa6.84□□□□□ -1.31
TRIM27-204ENST00000467742 PBXIP1Q96AQ6 731 aa6.84□□□□□ -1.31
TRIM27-204ENST00000467742 PUS7Q96PZ0 661 aaKnown RBP6.84□□□□□ -1.31
TRIM27-204ENST00000467742 NOD1Q9Y239 953 aa6.84□□□□□ -1.31
TRIM27-204ENST00000467742 SBF2Q86WG5 1849 aa6.84□□□□□ -1.31
TRIM27-204ENST00000467742 RGS12O14924 1447 aa6.84□□□□□ -1.32
TRIM27-204ENST00000467742 TTC21AQ8NDW8 1320 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 NCOA4Q13772 614 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 OXLD1Q5BKU9 147 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 POTEAQ6S8J7 498 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 TRIM50Q86XT4 487 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.83□□□□□ -1.32
TRIM27-204ENST00000467742 CCDC155Q8N6L0 562 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 NANOS1Q8WY41 292 aaKnown RBP6.83□□□□□ -1.32
TRIM27-204ENST00000467742 C8orf37Q96NL8 207 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 POLR3GLQ9BT43 218 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 VRTNQ9H8Y1 702 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 STK17AQ9UEE5 414 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 PKD1L3Q7Z443 1732 aa6.83□□□□□ -1.32
TRIM27-204ENST00000467742 CPDO75976 1380 aa6.82□□□□□ -1.32
TRIM27-204ENST00000467742 TOGARAM1Q9Y4F4 1720 aa6.82□□□□□ -1.32
TRIM27-204ENST00000467742 ATP1A2P50993 1020 aa6.82□□□□□ -1.32
TRIM27-204ENST00000467742 CLN3Q13286 438 aa6.82□□□□□ -1.32
TRIM27-204ENST00000467742 LYSMD3Q7Z3D4 306 aa6.82□□□□□ -1.32
TRIM27-204ENST00000467742 ABTB2Q8N961 1025 aa6.82□□□□□ -1.32
TRIM27-204ENST00000467742 DOT1LQ8TEK3 1739 aa6.81□□□□□ -1.32
TRIM27-204ENST00000467742 A0A1W2PRU2 124 aa6.81□□□□□ -1.32
TRIM27-204ENST00000467742 GNRH1P01148 92 aa6.81□□□□□ -1.32
TRIM27-204ENST00000467742 RFX1P22670 979 aa6.81□□□□□ -1.32
TRIM27-204ENST00000467742 CHRNA2Q15822 529 aa6.81□□□□□ -1.32
TRIM27-204ENST00000467742 MEX3CQ5U5Q3 659 aaKnown RBP6.81□□□□□ -1.32
TRIM27-204ENST00000467742 HDGFL2Q7Z4V5 671 aaPredicted RBP6.81□□□□□ -1.32
TRIM27-204ENST00000467742 TERF2IPQ9NYB0 399 aa6.81□□□□□ -1.32
TRIM27-204ENST00000467742 MKRN1Q9UHC7 482 aaKnown RBP6.81□□□□□ -1.32
TRIM27-204ENST00000467742 SMG6Q86US8 1419 aaKnown RBP6.81□□□□□ -1.32
TRIM27-204ENST00000467742 SENP3-EIF4A1A0A087X0R7 540 aa6.8□□□□□ -1.32
TRIM27-204ENST00000467742 MEN1O00255 615 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms