RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 SLFN5Q08AF3 891 aa17.95■□□□□ 0.46
CCHCR1-211ENST00000467553 CDCA7LQ96GN5 454 aa17.95■□□□□ 0.46
CCHCR1-211ENST00000467553 HHIPL1Q96JK4 782 aa17.95■□□□□ 0.46
CCHCR1-211ENST00000467553 CNOT7Q9UIV1 285 aaKnown RBP17.95■□□□□ 0.46
CCHCR1-211ENST00000467553 YDJCA8MPS7 323 aa17.94■□□□□ 0.46
CCHCR1-211ENST00000467553 C6orf229H3BNL8 230 aa17.94■□□□□ 0.46
CCHCR1-211ENST00000467553 FOXN1O15353 648 aa17.94■□□□□ 0.46
CCHCR1-211ENST00000467553 FLIIQ13045 1269 aa17.94■□□□□ 0.46
CCHCR1-211ENST00000467553 TLL2Q9Y6L7 1015 aa17.94■□□□□ 0.46
CCHCR1-211ENST00000467553 NEXNQ0ZGT2 675 aa17.93■□□□□ 0.46
CCHCR1-211ENST00000467553 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
CCHCR1-211ENST00000467553 CST9Q5W186 159 aa17.93■□□□□ 0.46
CCHCR1-211ENST00000467553 CDC37L1Q7L3B6 337 aa17.93■□□□□ 0.46
CCHCR1-211ENST00000467553 JARID2Q92833 1246 aaPredicted RBP17.93■□□□□ 0.46
CCHCR1-211ENST00000467553 ZC3H12CQ9C0D7 883 aaKnown RBP17.93■□□□□ 0.46
CCHCR1-211ENST00000467553 POLLQ9UGP5 575 aa17.93■□□□□ 0.46
CCHCR1-211ENST00000467553 CACNA1FO60840 1977 aa17.93■□□□□ 0.46
CCHCR1-211ENST00000467553 MAP2K2P36507 400 aa17.92■□□□□ 0.46
CCHCR1-211ENST00000467553 GPSM2P81274 684 aa17.92■□□□□ 0.46
CCHCR1-211ENST00000467553 TBC1D16Q8TBP0 767 aa17.92■□□□□ 0.46
CCHCR1-211ENST00000467553 THSD7BQ9C0I4 1608 aa17.9■□□□□ 0.46
CCHCR1-211ENST00000467553 PSMD14O00487 310 aa17.9■□□□□ 0.46
CCHCR1-211ENST00000467553 ECE2O60344 883 aa17.9■□□□□ 0.46
CCHCR1-211ENST00000467553 IGKV5-2P06315 115 aa17.9■□□□□ 0.46
CCHCR1-211ENST00000467553 MICALL2Q8IY33 904 aa17.9■□□□□ 0.46
CCHCR1-211ENST00000467553 CAPNS2Q96L46 248 aa17.9■□□□□ 0.46
CCHCR1-211ENST00000467553 BEGAINQ9BUH8 593 aa17.9■□□□□ 0.46
CCHCR1-211ENST00000467553 DBNDD1Q9H9R9 158 aa17.9■□□□□ 0.46
CCHCR1-211ENST00000467553 ANKIB1Q9P2G1 1089 aa17.9■□□□□ 0.46
CCHCR1-211ENST00000467553 GGA1Q9UJY5 639 aa17.9■□□□□ 0.46
CCHCR1-211ENST00000467553 G3V3G9 751 aa17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 TRAF5O00463 557 aa17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 RIMBP2O15034 1052 aa17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 CELF2O95319 508 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 HIRAP54198 1017 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 CWF19L2Q2TBE0 894 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 DCAF8Q5TAQ9 597 aa17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 SAPCD2Q86UD0 394 aa17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 ANKRD18AQ8IVF6 992 aa17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 DNAAF4Q8WXU2 420 aa17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 GPR101Q96P66 508 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 CDC5LQ99459 802 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-211ENST00000467553 VIL1P09327 827 aaKnown RBP17.88■□□□□ 0.45
CCHCR1-211ENST00000467553 SEC31BQ9NQW1 1179 aa17.88■□□□□ 0.45
CCHCR1-211ENST00000467553 XDHP47989 1333 aa17.88■□□□□ 0.45
CCHCR1-211ENST00000467553 ZNF609O15014 1411 aa17.88■□□□□ 0.45
CCHCR1-211ENST00000467553 MYH3P11055 1940 aa17.88■□□□□ 0.45
CCHCR1-211ENST00000467553 NEURL1BA8MQ27 555 aa17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 F6X3S4 739 aa17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 CA12O43570 354 aa17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 UFL1O94874 794 aa17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 ATP2B4P23634 1241 aa17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 PAXIP1Q6ZW49 1069 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 TRMT2AQ8IZ69 625 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 TRPM4Q8TD43 1214 aa17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 GLIS2Q9BZE0 524 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 ZBTB12Q9Y330 459 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 RTL9Q8NET4 1388 aa17.87■□□□□ 0.45
CCHCR1-211ENST00000467553 CTSWP56202 376 aa17.86■□□□□ 0.45
CCHCR1-211ENST00000467553 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCHCR1-211ENST00000467553 FMR1Q06787 632 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCHCR1-211ENST00000467553 CYP4F22Q6NT55 531 aa17.86■□□□□ 0.45
CCHCR1-211ENST00000467553 AGBL3Q8NEM8 1001 aa17.86■□□□□ 0.45
CCHCR1-211ENST00000467553 HSPA8P11142 646 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-211ENST00000467553 MMP14P50281 582 aa17.85■□□□□ 0.45
CCHCR1-211ENST00000467553 LBX1P52954 281 aa17.85■□□□□ 0.45
CCHCR1-211ENST00000467553 PSME4Q14997 1843 aa17.85■□□□□ 0.45
CCHCR1-211ENST00000467553 DOK7Q18PE1 504 aa17.85■□□□□ 0.45
CCHCR1-211ENST00000467553 PODNQ7Z5L7 613 aa17.85■□□□□ 0.45
CCHCR1-211ENST00000467553 DCPSQ96C86 337 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-211ENST00000467553 BSDC1Q9NW68 430 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-211ENST00000467553 COL4A1P02462 1669 aa17.84■□□□□ 0.45
CCHCR1-211ENST00000467553 SAMD7Q7Z3H4 446 aa17.84■□□□□ 0.45
CCHCR1-211ENST00000467553 MRPL50Q8N5N7 158 aaKnown RBP17.84■□□□□ 0.45
CCHCR1-211ENST00000467553 LINS1Q8NG48 757 aa17.84■□□□□ 0.45
CCHCR1-211ENST00000467553 TTLL11Q8NHH1 800 aa17.84■□□□□ 0.45
CCHCR1-211ENST00000467553 CCDC85AQ96PX6 553 aaPredicted RBP17.84■□□□□ 0.45
CCHCR1-211ENST00000467553 POLR2AP24928 1970 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 H7C1W4 665 aa17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 CAPN15O75808 1086 aa17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 BRPF1P55201 1214 aaPredicted RBP17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 GCKRQ14397 625 aa17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 SLC4A10Q6U841 1118 aa17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 UBE3BQ7Z3V4 1068 aa17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 KRT26Q7Z3Y9 468 aa17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 USP48Q86UV5 1035 aa17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 SSH1Q8WYL5 1049 aa17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 PLA2G12BQ9BX93 195 aa17.83■□□□□ 0.44
CCHCR1-211ENST00000467553 SCN9AQ15858 1988 aa17.82■□□□□ 0.44
CCHCR1-211ENST00000467553 ZNF280AP59817 542 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-211ENST00000467553 NOGQ13253 232 aa17.82■□□□□ 0.44
CCHCR1-211ENST00000467553 TBC1D10BQ4KMP7 808 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-211ENST00000467553 RSBN1LQ6PCB5 846 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-211ENST00000467553 MED23Q9ULK4 1368 aa17.81■□□□□ 0.44
CCHCR1-211ENST00000467553 SHTN1A0MZ66 631 aa17.81■□□□□ 0.44
CCHCR1-211ENST00000467553 KIF4BQ2VIQ3 1234 aa17.81■□□□□ 0.44
CCHCR1-211ENST00000467553 BEND3Q5T5X7 828 aa17.81■□□□□ 0.44
CCHCR1-211ENST00000467553 C2orf69Q8N8R5 385 aa17.81■□□□□ 0.44
CCHCR1-211ENST00000467553 ZNF408Q9H9D4 720 aa17.81■□□□□ 0.44
CCHCR1-211ENST00000467553 KCNQ5Q9NR82 932 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms