RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 H2AFB2P0C5Z0 115 aa7.21□□□□□ -1.26
CCDC58-203ENST00000466854 BRD2P25440 801 aaKnown RBP7.21□□□□□ -1.26
CCDC58-203ENST00000466854 SOX18P35713 384 aa7.21□□□□□ -1.26
CCDC58-203ENST00000466854 C14orf37Q86TY3 774 aa7.21□□□□□ -1.26
CCDC58-203ENST00000466854 PLD4Q96BZ4 506 aa7.21□□□□□ -1.26
CCDC58-203ENST00000466854 NSUN5Q96P11 429 aaKnown RBP7.21□□□□□ -1.26
CCDC58-203ENST00000466854 LOC102724428A0A0B4J2F2 783 aa7.2□□□□□ -1.26
CCDC58-203ENST00000466854 PSAPP07602 524 aa7.2□□□□□ -1.26
CCDC58-203ENST00000466854 ARID4AP29374 1257 aaPredicted RBP7.2□□□□□ -1.26
CCDC58-203ENST00000466854 SIK1P57059 783 aa7.2□□□□□ -1.26
CCDC58-203ENST00000466854 NAA30Q147X3 362 aaPredicted RBP7.2□□□□□ -1.26
CCDC58-203ENST00000466854 NOS3P29474 1203 aa7.19□□□□□ -1.26
CCDC58-203ENST00000466854 NLRP13Q86W25 1043 aa7.19□□□□□ -1.26
CCDC58-203ENST00000466854 WFDC12Q8WWY7 111 aa7.19□□□□□ -1.26
CCDC58-203ENST00000466854 CLP1Q92989 425 aaKnown RBP7.19□□□□□ -1.26
CCDC58-203ENST00000466854 TP53INP1Q96A56 240 aa7.19□□□□□ -1.26
CCDC58-203ENST00000466854 DLL1O00548 723 aa7.18□□□□□ -1.26
CCDC58-203ENST00000466854 ZMYND15Q9H091 742 aa7.18□□□□□ -1.26
CCDC58-203ENST00000466854 ZBTB39O15060 712 aa7.17□□□□□ -1.26
CCDC58-203ENST00000466854 PTCD1O75127 700 aaKnown RBP7.17□□□□□ -1.26
CCDC58-203ENST00000466854 COBLO75128 1261 aa7.17□□□□□ -1.26
CCDC58-203ENST00000466854 ZAP70P43403 619 aa7.17□□□□□ -1.26
CCDC58-203ENST00000466854 IREB2P48200 963 aaKnown RBP7.17□□□□□ -1.26
CCDC58-203ENST00000466854 COL13A1Q5TAT6 717 aaPredicted RBP7.17□□□□□ -1.26
CCDC58-203ENST00000466854 GDF6Q6KF10 455 aaPredicted RBP7.17□□□□□ -1.26
CCDC58-203ENST00000466854 KRTAP5-3Q6L8H2 238 aa7.17□□□□□ -1.26
CCDC58-203ENST00000466854 IGF2-ASQ6U949 168 aa7.17□□□□□ -1.26
CCDC58-203ENST00000466854 PBXIP1Q96AQ6 731 aa7.17□□□□□ -1.26
CCDC58-203ENST00000466854 MEGF10Q96KG7 1140 aa7.17□□□□□ -1.26
CCDC58-203ENST00000466854 UBAP1LF5GYI3 381 aa7.16□□□□□ -1.26
CCDC58-203ENST00000466854 GHRHP01286 108 aa7.16□□□□□ -1.26
CCDC58-203ENST00000466854 OR13H1Q8NG92 308 aa7.16□□□□□ -1.26
CCDC58-203ENST00000466854 TRIM33Q9UPN9 1127 aa7.16□□□□□ -1.26
CCDC58-203ENST00000466854 SETDB1Q15047 1291 aa7.15□□□□□ -1.26
CCDC58-203ENST00000466854 IL22RA1Q8N6P7 574 aa7.15□□□□□ -1.26
CCDC58-203ENST00000466854 PIK3R5Q8WYR1 880 aa7.15□□□□□ -1.26
CCDC58-203ENST00000466854 STIM2Q9P246 746 aa7.15□□□□□ -1.26
CCDC58-203ENST00000466854 SCO2A0A1W2PP80 73 aa7.14□□□□□ -1.27
CCDC58-203ENST00000466854 ADAMTSL4Q6UY14 1074 aa7.14□□□□□ -1.27
CCDC58-203ENST00000466854 GPR152Q8TDT2 470 aa7.14□□□□□ -1.27
CCDC58-203ENST00000466854 SEPT3Q9UH03 358 aa7.14□□□□□ -1.27
CCDC58-203ENST00000466854 ATP2B4P23634 1241 aa7.13□□□□□ -1.27
CCDC58-203ENST00000466854 ATP11AP98196 1134 aa7.13□□□□□ -1.27
CCDC58-203ENST00000466854 ARTNQ5T4W7 220 aa7.13□□□□□ -1.27
CCDC58-203ENST00000466854 CCDC97Q96F63 343 aaPredicted RBP7.13□□□□□ -1.27
CCDC58-203ENST00000466854 RBSNQ9H1K0 784 aa7.13□□□□□ -1.27
CCDC58-203ENST00000466854 FAM13BQ9NYF5 915 aa7.13□□□□□ -1.27
CCDC58-203ENST00000466854 ALX3O95076 343 aa7.12□□□□□ -1.27
CCDC58-203ENST00000466854 CYP2E1P05181 493 aaPredicted RBP7.12□□□□□ -1.27
CCDC58-203ENST00000466854 DZIP1LQ8IYY4 767 aaKnown RBP7.12□□□□□ -1.27
CCDC58-203ENST00000466854 ARID3CA6NKF2 412 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 F8W735 103 aaPredicted RBP7.11□□□□□ -1.27
CCDC58-203ENST00000466854 TM4SF5O14894 197 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 KIF4AO95239 1232 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 HYAL2Q12891 473 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 ATCAYQ86WG3 371 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 TMEM130Q8N3G9 435 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 ABTB2Q8N961 1025 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 GALNT11Q8NCW6 608 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 MRPL18Q9H0U6 180 aaKnown RBP7.11□□□□□ -1.27
CCDC58-203ENST00000466854 AKTIPQ9H8T0 292 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 SRA1Q9HD15 236 aaKnown RBP7.11□□□□□ -1.27
CCDC58-203ENST00000466854 ZFP64Q9NPA5 681 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 ABI2Q9NYB9 513 aaPredicted RBP7.11□□□□□ -1.27
CCDC58-203ENST00000466854 SERPINA10Q9UK55 444 aa7.11□□□□□ -1.27
CCDC58-203ENST00000466854 SCNN1AP37088 669 aa7.1□□□□□ -1.27
CCDC58-203ENST00000466854 Q6ZS46 218 aa7.1□□□□□ -1.27
CCDC58-203ENST00000466854 MAP4K3Q8IVH8 894 aa7.1□□□□□ -1.27
CCDC58-203ENST00000466854 KRTAP9-8Q9BYQ0 159 aa7.1□□□□□ -1.27
CCDC58-203ENST00000466854 RASSF4Q9H2L5 321 aa7.1□□□□□ -1.27
CCDC58-203ENST00000466854 FNDC3AQ9Y2H6 1198 aaKnown RBP7.1□□□□□ -1.27
CCDC58-203ENST00000466854 TTC39BQ5VTQ0 682 aaPredicted RBP7.09□□□□□ -1.27
CCDC58-203ENST00000466854 TXNDC11Q6PKC3 985 aa7.09□□□□□ -1.27
CCDC58-203ENST00000466854 PRR23CQ6ZRP0 262 aa7.09□□□□□ -1.27
CCDC58-203ENST00000466854 CACTIN-AS1Q8N1I8 211 aa7.09□□□□□ -1.27
CCDC58-203ENST00000466854 AGGF1Q8N302 714 aaeCLIP7.09□□□□□ -1.27
CCDC58-203ENST00000466854 NUDT16Q96DE0 195 aaKnown RBP7.09□□□□□ -1.27
CCDC58-203ENST00000466854 LACRTQ9GZZ8 138 aa7.09□□□□□ -1.27
CCDC58-203ENST00000466854 TMEM63CQ9P1W3 806 aa7.09□□□□□ -1.27
CCDC58-203ENST00000466854 PPME1Q9Y570 386 aa7.09□□□□□ -1.27
CCDC58-203ENST00000466854 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.09□□□□□ -1.27
CCDC58-203ENST00000466854 LINC01387J3KSC0 135 aa7.08□□□□□ -1.28
CCDC58-203ENST00000466854 LRP8Q14114 963 aa7.08□□□□□ -1.28
CCDC58-203ENST00000466854 CEP135Q66GS9 1140 aa7.08□□□□□ -1.28
CCDC58-203ENST00000466854 PDE12Q6L8Q7 609 aaKnown RBP7.08□□□□□ -1.28
CCDC58-203ENST00000466854 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.08□□□□□ -1.28
CCDC58-203ENST00000466854 CEP120Q8N960 986 aa7.08□□□□□ -1.28
CCDC58-203ENST00000466854 MUC3BQ9H195 1237 aa7.08□□□□□ -1.28
CCDC58-203ENST00000466854 ELP3Q9H9T3 547 aa7.08□□□□□ -1.28
CCDC58-203ENST00000466854 SMNDC1O75940 238 aaKnown RBP eCLIP7.07□□□□□ -1.28
CCDC58-203ENST00000466854 WISP1O95388 367 aa7.07□□□□□ -1.28
CCDC58-203ENST00000466854 HELQQ8TDG4 1101 aa7.07□□□□□ -1.28
CCDC58-203ENST00000466854 SPACA7Q96KW9 195 aa7.07□□□□□ -1.28
CCDC58-203ENST00000466854 KCNK4Q9NYG8 393 aa7.07□□□□□ -1.28
CCDC58-203ENST00000466854 CNTN3Q9P232 1028 aa7.07□□□□□ -1.28
CCDC58-203ENST00000466854 KANSL3Q9P2N6 904 aa7.07□□□□□ -1.28
CCDC58-203ENST00000466854 TMEM88BA6NKF7 163 aa7.06□□□□□ -1.28
CCDC58-203ENST00000466854 HYAL3O43820 417 aaPredicted RBP7.06□□□□□ -1.28
CCDC58-203ENST00000466854 EPHA1P21709 976 aa7.06□□□□□ -1.28
CCDC58-203ENST00000466854 CDC27P30260 824 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms