RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-208ENST00000466694 MCTP1Q6DN14 999 aa20.33■□□□□ 0.85
NUP58-208ENST00000466694 HMG20BQ9P0W2 317 aa20.33■□□□□ 0.85
NUP58-208ENST00000466694 AKAP2Q9Y2D5 859 aa20.33■□□□□ 0.85
NUP58-208ENST00000466694 NDUFB9Q9Y6M9 179 aa20.33■□□□□ 0.85
NUP58-208ENST00000466694 BCORQ6W2J9 1755 aa20.33■□□□□ 0.84
NUP58-208ENST00000466694 TAF1LQ8IZX4 1826 aa20.33■□□□□ 0.84
NUP58-208ENST00000466694 FSD2A1L4K1 749 aa20.33■□□□□ 0.84
NUP58-208ENST00000466694 GPTP24298 496 aa20.33■□□□□ 0.84
NUP58-208ENST00000466694 DZIP3Q86Y13 1208 aaKnown RBP20.33■□□□□ 0.84
NUP58-208ENST00000466694 PAG1Q9NWQ8 432 aa20.33■□□□□ 0.84
NUP58-208ENST00000466694 TSGA10IPQ3SY00 556 aa20.32■□□□□ 0.84
NUP58-208ENST00000466694 TAF7LQ5H9L4 462 aa20.32■□□□□ 0.84
NUP58-208ENST00000466694 USPL1Q5W0Q7 1092 aa20.32■□□□□ 0.84
NUP58-208ENST00000466694 DDX46Q7L014 1031 aaKnown RBP20.32■□□□□ 0.84
NUP58-208ENST00000466694 SH3TC1Q8TE82 1336 aa20.32■□□□□ 0.84
NUP58-208ENST00000466694 GOLGA6L3A6NEY3 463 aa20.31■□□□□ 0.84
NUP58-208ENST00000466694 CPA1P15085 419 aa20.31■□□□□ 0.84
NUP58-208ENST00000466694 MCMDC2Q4G0Z9 681 aa20.31■□□□□ 0.84
NUP58-208ENST00000466694 ZSCAN31Q96LW9 406 aaPredicted RBP20.31■□□□□ 0.84
NUP58-208ENST00000466694 KLHL40Q2TBA0 621 aa20.3■□□□□ 0.84
NUP58-208ENST00000466694 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.3■□□□□ 0.84
NUP58-208ENST00000466694 GOLIM4O00461 696 aa20.3■□□□□ 0.84
NUP58-208ENST00000466694 IFIT1P09914 478 aaKnown RBP20.3■□□□□ 0.84
NUP58-208ENST00000466694 CTSWP56202 376 aa20.3■□□□□ 0.84
NUP58-208ENST00000466694 ZNF34Q8IZ26 560 aa20.3■□□□□ 0.84
NUP58-208ENST00000466694 TTLL11Q8NHH1 800 aa20.3■□□□□ 0.84
NUP58-208ENST00000466694 SH2B1Q9NRF2 756 aaPredicted RBP20.3■□□□□ 0.84
NUP58-208ENST00000466694 LMBRD1Q9NUN5 540 aa20.3■□□□□ 0.84
NUP58-208ENST00000466694 EP400Q96L91 3159 aa20.29■□□□□ 0.84
NUP58-208ENST00000466694 IRS4O14654 1257 aaPredicted RBP20.29■□□□□ 0.84
NUP58-208ENST00000466694 SYNE4Q8N205 404 aa20.29■□□□□ 0.84
NUP58-208ENST00000466694 LINC00116Q8NCU8 138 aa20.29■□□□□ 0.84
NUP58-208ENST00000466694 HELLSQ9NRZ9 838 aa20.29■□□□□ 0.84
NUP58-208ENST00000466694 TRMT112Q9UI30 125 aaKnown RBP20.29■□□□□ 0.84
NUP58-208ENST00000466694 ISY1Q9ULR0 285 aaKnown RBP20.29■□□□□ 0.84
NUP58-208ENST00000466694 TBC1D2BQ9UPU7 963 aa20.29■□□□□ 0.84
NUP58-208ENST00000466694 CCDC85AQ96PX6 553 aaPredicted RBP20.28■□□□□ 0.84
NUP58-208ENST00000466694 ALDH8A1Q9H2A2 487 aaPredicted RBP20.28■□□□□ 0.84
NUP58-208ENST00000466694 U3KPZ7 1027 aaPredicted RBP20.28■□□□□ 0.84
NUP58-208ENST00000466694 RIC1Q4ADV7 1423 aa20.28■□□□□ 0.84
NUP58-208ENST00000466694 CNTNAP4Q9C0A0 1308 aa20.28■□□□□ 0.84
NUP58-208ENST00000466694 CCDC158Q5M9N0 1113 aa20.28■□□□□ 0.84
NUP58-208ENST00000466694 DDX49Q9Y6V7 483 aaKnown RBP20.28■□□□□ 0.84
NUP58-208ENST00000466694 UBN2Q6ZU65 1347 aa20.27■□□□□ 0.84
NUP58-208ENST00000466694 WDR33Q9C0J8 1336 aaKnown RBP20.27■□□□□ 0.84
NUP58-208ENST00000466694 ANKRD18BA2A2Z9 1011 aa20.27■□□□□ 0.84
NUP58-208ENST00000466694 PDE8AO60658 829 aa20.27■□□□□ 0.84
NUP58-208ENST00000466694 ITGA6P23229 1130 aa20.27■□□□□ 0.84
NUP58-208ENST00000466694 KRT32Q14532 448 aa20.27■□□□□ 0.84
NUP58-208ENST00000466694 BLOC1S2Q6QNY1 142 aa20.27■□□□□ 0.84
NUP58-208ENST00000466694 GREM2Q9H772 168 aa20.27■□□□□ 0.84
NUP58-208ENST00000466694 RIPOR2Q9Y4F9 1068 aa20.27■□□□□ 0.84
NUP58-208ENST00000466694 XAGE2Q96GT9 111 aa20.26■□□□□ 0.83
NUP58-208ENST00000466694 AK7Q96M32 723 aa20.26■□□□□ 0.83
NUP58-208ENST00000466694 SEC62Q99442 399 aaKnown RBP20.26■□□□□ 0.83
NUP58-208ENST00000466694 ABCC12Q96J65 1359 aa20.26■□□□□ 0.83
NUP58-208ENST00000466694 SCN7AQ01118 1682 aa20.26■□□□□ 0.83
NUP58-208ENST00000466694 CAMTA2O94983 1202 aa20.26■□□□□ 0.83
NUP58-208ENST00000466694 RPS6KB1P23443 525 aa20.26■□□□□ 0.83
NUP58-208ENST00000466694 ANKRD1Q15327 319 aa20.26■□□□□ 0.83
NUP58-208ENST00000466694 TTC39AQ5SRH9 613 aa20.26■□□□□ 0.83
NUP58-208ENST00000466694 ZMYM1Q5SVZ6 1142 aa20.26■□□□□ 0.83
NUP58-208ENST00000466694 CCDC129Q6ZRS4 1044 aa20.26■□□□□ 0.83
NUP58-208ENST00000466694 LARP6Q9BRS8 491 aaKnown RBP20.26■□□□□ 0.83
NUP58-208ENST00000466694 LARGE1O95461 756 aa20.25■□□□□ 0.83
NUP58-208ENST00000466694 CHGBP05060 677 aa20.25■□□□□ 0.83
NUP58-208ENST00000466694 GORABQ5T7V8 394 aa20.25■□□□□ 0.83
NUP58-208ENST00000466694 SMC3Q9UQE7 1217 aa20.25■□□□□ 0.83
NUP58-208ENST00000466694 ADORA1P30542 326 aa20.24■□□□□ 0.83
NUP58-208ENST00000466694 KCNQ4P56696 695 aa20.24■□□□□ 0.83
NUP58-208ENST00000466694 METTL24Q5JXM2 366 aa20.24■□□□□ 0.83
NUP58-208ENST00000466694 FOXD4L5Q5VV16 416 aaPredicted RBP20.24■□□□□ 0.83
NUP58-208ENST00000466694 LDHAL6AQ6ZMR3 332 aa20.24■□□□□ 0.83
NUP58-208ENST00000466694 FOXD4L4Q8WXT5 416 aaPredicted RBP20.24■□□□□ 0.83
NUP58-208ENST00000466694 LRP5O75197 1615 aa20.24■□□□□ 0.83
NUP58-208ENST00000466694 RNF113AO15541 343 aaKnown RBP20.24■□□□□ 0.83
NUP58-208ENST00000466694 LRRFIP1Q32MZ4 808 aaKnown RBP20.24■□□□□ 0.83
NUP58-208ENST00000466694 TAF6LQ9Y6J9 622 aa20.24■□□□□ 0.83
NUP58-208ENST00000466694 PRPF40AO75400 957 aaKnown RBP20.23■□□□□ 0.83
NUP58-208ENST00000466694 ATP2B3Q16720 1220 aa20.23■□□□□ 0.83
NUP58-208ENST00000466694 RC3H1Q5TC82 1133 aaKnown RBP20.23■□□□□ 0.83
NUP58-208ENST00000466694 DSCC1Q9BVC3 393 aa20.23■□□□□ 0.83
NUP58-208ENST00000466694 BCL11BQ9C0K0 894 aaPredicted RBP20.23■□□□□ 0.83
NUP58-208ENST00000466694 ME3Q16798 604 aa20.22■□□□□ 0.83
NUP58-208ENST00000466694 CCDC83Q8IWF9 413 aa20.22■□□□□ 0.83
NUP58-208ENST00000466694 CNNM1Q9NRU3 951 aa20.22■□□□□ 0.83
NUP58-208ENST00000466694 TPCN1Q9ULQ1 816 aa20.22■□□□□ 0.83
NUP58-208ENST00000466694 LAMB2P55268 1798 aa20.22■□□□□ 0.83
NUP58-208ENST00000466694 C4BP0C0L5 1744 aa20.22■□□□□ 0.83
NUP58-208ENST00000466694 MRE11P49959 708 aa20.22■□□□□ 0.83
NUP58-208ENST00000466694 ZNF772Q68DY9 489 aaPredicted RBP20.22■□□□□ 0.83
NUP58-208ENST00000466694 BRPF3Q9ULD4 1205 aa20.22■□□□□ 0.83
NUP58-208ENST00000466694 DDX60Q8IY21 1712 aaKnown RBP20.21■□□□□ 0.83
NUP58-208ENST00000466694 PARP10Q53GL7 1025 aa20.21■□□□□ 0.83
NUP58-208ENST00000466694 KRT27Q7Z3Y8 459 aa20.21■□□□□ 0.83
NUP58-208ENST00000466694 VGLL2Q8N8G2 317 aa20.21■□□□□ 0.83
NUP58-208ENST00000466694 CCNL1Q9UK58 526 aaPredicted RBP20.21■□□□□ 0.83
NUP58-208ENST00000466694 ZFYP08048 801 aaPredicted RBP20.2■□□□□ 0.82
NUP58-208ENST00000466694 XRCC6P12956 609 aaKnown RBP eCLIP20.2■□□□□ 0.82
NUP58-208ENST00000466694 FKBP4Q02790 459 aaKnown RBP eCLIP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms